ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150671 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
APOA1
CCDC200
ITGB3BP
EFCAB7
SMCO1
AADACL4
C19orf18
MAPRE2
MAMDC2
RABGAP1
DEGS2
YPEL3
TBX6
ZNF572
STC1
UBE2F
KRBA1
ZNF623
DUSP6
RBBP5
SF3A3
RABGAP1L
YWHAQ
DHRS2
ARHGAP39
PTDSS2
ANO9
RCAN1
COL18A1
FAM209A
ZNF829
ZNF568
GALNT1
PDE11A
ZFP30
ATF7IP
TMEM229B
MTF2
NUF2
ZNF32
CANT1
SUMO3
COX16
FAM184A
TMEM89
TARS2
GABPB2
TMEM132A
SAMD4B
MROH7
MSRA
KDM3A
THEM4
GBA
PRSS38
MTRNR2L8
SLC33A1
WDR74
OPRL1
LKAAEAR1
DBNDD2
NDUFB3
FAM126B
DKKL1
ZNF117
PAXBP1
MTR
RPL27
TBC1D19
ISY1-RAB43
ISY1
SSBP1
ANP32D
DISP1
SUPT7L
SLC4A1AP
ATP5MC2
GLIPR1L2
RBM33
ACTL8
DNAJC25-GNG10
DNAJC25
CALCRL
COX7A2
ZNF772
UTP3
TFPT
PRPF31
TRIP4
ZBED9
TTI2
RNF125
COL4A5
COL4A6
AURKAIP1
PRRT1B
ZNF408
ARHGAP1
ARID1A
TBL1X
SLCO1A2
EXTL2
KRTAP5-1
CBX1
DMAP1
DNAJB12
NDUFS7
GTF2H4
RPS7
ZNF540
ZNF571
AHCYL1
GYPC
SULT1C4
ALG14
ZMPSTE24
LIMK1
LARP1
JMJD1C
COMMD2
CEP85L
DUX4
ZNF461
UFC1
TM2D1
RPS29
MMACHC
ZNF324B
GRAMD4
NOP16
HIGD2A
ZNF20
TLR2
COPS4
LCN8
VTA1
NMBR
METTL25
CCDC59
CREM
HDAC8
RERE
ZNF577
PPIP5K2
AASDH
FBXW7
GADD45A
IRF2BP2
SLC1A7
PIH1D2
NKAPD1
CACNG1
MIS18BP1
RAB30
ZSCAN22
MED23
NUP107
TEX50
CFAP298-TCP10L
CFAP298
ILF2
SCMH1
TEFM
TTC26
MNAT1
COL23A1
GRPEL2
HEATR1
CNIH4
TMEM14C
TRMT5
SLC38A6
CAT
CDK14
SOX30
EPHA3
OR4K17
TACO1
LPIN1
BRF2
PAFAH2
EPRS1
PEX3
ADAT2
TTC32
EIF3F
WDR11
SPANXB1
TMEM242
CD14
ZNF501
NME1
REXO4
ADAMTS13
MRPL1
STAT3
ATF7IP2
MRPL48
DDX41
RAD51AP1
C12orf4
SLC25A53
ZNF165
CLTB
POLR3B
RCAN2
HLA-E
ELFN2
BORCS7
EIF2S1
ATP6V1D
SELENOH
ATG4C
PIKFYVE
KRTAP10-1
KDM1A
TEX46
CDK19
AMD1
C8orf37
TMEM259
CNN2
PPRC1
YJU2
IL36RN
IL36B
GTPBP3
ANO8
INTS2
ZNF391
FAM13A
RPL37
MYO1H
TRMT11
HAPLN2
CPPED1
IL17F
SAR1B
B4GALNT2
CDC5L
IGFALS
RNF187
RPS26
IRAK2
ZNHIT6
FAM234A
EIF1AD
BANF1
CCNI
MAN2A1
LGALS3BP
MBOAT4
RBBP9
INTS5
ARID3B
HAX1
BORCS6
TNFRSF1B
RAG2
IFTAP
PNPLA7
NEMF
PUS10
PEX13
ZNF791
ZNF490
NOL8
CENPP
ZSCAN30
PCDH15
ELFN1
SLC24A1
SLC45A4
SMG8
EFHD1
SF3B5
SPRR2F
GOLGA5
IARS1
CNGA1
MAIP1
TRAPPC8
DUSP14
MTRNR2L2
MSH3
DHFR
FRA10AC1
SNRPD1
GSR
RAB18
MRPL30
MITD1
CCDC174
HTRA2
DQX1
RNF217
BCL2L13
POLR2J3
SEC22B
APOBEC3B
BAIAP2
MMEL1
MAST2
FOXO3B
NR1I2
SAMD1
WBP1
INO80B
TNPO3
ZNF556
BMS1
MED18
CWC25
SPAG9
NEU1
SHOC2
BBIP1
ZNF383
POMGNT1
LURAP1
TRMO
HTR5A
CCDC107
GABRR2
FAIM
DHX16
AP1G1
MRPS23
PLCH1
CPD
NOS3
GLI1
KRR1
TATDN2
RBM45
RNF207
EIF2D
C2orf88
TMEM44
LSG1
TMEM79
SMG5
SMG7
ZNRF4
PPIL3
NIF3L1
ZBTB25
ZBTB1
LRP6
MLPH
SLAIN1
SNRPD3
GUCD1
RTTN
VPS52
RPS18
B3GALT4
ELAVL2
RPL5
ZNF790
RPS3A
PDE1A
LRRC49
THAP10
RPA2
CCDC97
DCT
EVPL
TMEM41A
SNIP1
DNALI1
CFHR4
GALNTL5
MOB4
ENG
ARMC7
MRPS18C
HELQ
KDM5C
TTLL12
PPP1R11
ALKBH3
TUT1
SGMS2
FDXACB1
C11orf1
SIAH1
LUC7L2
FMC1-LUC7L2
FMC1
SKP2
LMBRD2
CDYL
FAM13B
PDCD6IP
DYRK4
NID1
PNMA2
DPYSL2
TMEM101
PACSIN2
CSRNP3
RIF1
ZDHHC6
VTI1A
LRCOL1
PPP6R1
MAP3K14
REEP3
CCNC
RANBP2
TUBB
MDC1
RUNDC3B
SYT1
ZSCAN25
NCOA7
GSTA4
ZNF226
KRTAP10-9
PES1
TARS3
DCP1A
TIGD2
POLG
TMBIM6
ZNF570
ZNF569
TTC39C
ZNF806
TMEM275
UBR2
WDPCP
MDH1
RFFL
DRG2
DCLRE1B
AP4B1
IRF9
ARMCX5-GPRASP2
ARMCX5
GPRC5C
ZNF134
ZMYND8
GMEB2
RAB5IF
ARID5B
FAM199X
INSYN2B
DSTYK
GTF2H2C_2
GTF2H2C
TRUB2
COQ4
DHTKD1
SLC18B1
ATG5
GCNT2
SOBP
CSNK1E
TOMM20
PNISR
DOCK3
POLDIP3
ZNF688
IL36A
KIF12
GORASP2
TIAM1
FAAP20
PARP2
ZNF585A
INO80C
LTN1
SDR42E1
PDGFD
AARS2
ZNF793
CALCB
MRPS16
SLC39A9
ERH
DNM2
DAPK3
SCNM1
LYSMD1
LONRF2
OSGEPL1
STX1A
SSH2
EFCAB5
MTBP
MRPL13
RPS13
SLITRK5
LRIG2
POC1B-GALNT4
POC1B
GALNT4
PLA2G2A
CREB5
CFAP20
ADCY10
TPM3
ZBTB45
FAM124B
KAZN
WDR36
KLHL20
THG1L
TAF12
ZNF566
ZNF841
TXN2
HBS1L
SPSB1
SNX27
PLK3
CSTF2T
ALG10B
MTOR
SNRPE
ZNF292
ZNF546
CLPTM1
KANSL3
FER1L5
NECAP2
SLC39A6
ELP2
PLK2
CLASP2
TMEM72
FAM89A
BRAP
ACAD10
RIPPLY3
GSTP1
HEBP2
NTN1
AJUBA
TBCB
PNPO
PSMD9
HPD
NME4
BANP
DCP1B
ZNF350
RPS14
ZNF302
HTR3A
CTAG1B
CTAG1A
NRL
AIFM1
IFI6
DCAF11
CTSK
CHID1
POLR1H
CCDC120
ACOX3
TRMT44
TSFM
ATP5F1B
FRRS1
RPL7A
MED22
SURF2
SURF1
UTP25
DEDD
SIKE1
PPIG
RPTOR
MRPL54
APBA3
UBOX5
FASTKD5
MED11
STX18
PRIM2
COIL
VPS45
CREBL2
CC2D2B
ZXDC
NFKBIL1
ATP6V1G2
DDX39B
TPK1
SEC23B
LRRC29
TRIM41
RPL7L1
TXLNB
CDK5RAP1
NR1H3
ACP2
CDIPT
MAEA
RGPD2
RGPD1
SUGCT
MPLKIP
CEP120
KDM6B
ARRB2
PDCD7
GTF2H2
IL21R
TMEM30A
ANKRD13C
CYCS
ZNF317
OPA1
COA6
LRFN3
MXI1
OSGIN1
ARF1
RMND1
ARMT1
PDE10A
TMEM107
TRIM46
KRTCAP2
CNIH3
GSTM5
SLC35A3
TRIM5
TRIM22
TMEM128
IRAK1BP1
LOC100421372
HSPA14
CDNF
SLC35B1
SNRPB
GFM2
PPIH
ARTN
AMACR
PTCHD4
GALK2
LOC102724265
COPS2
GTF2B
PRRG2
NOSIP
DDX18
MAD2L1BP
GTPBP2
DNAJC16
CASP9
RNF146
S100A13
S100A1
PRSS41
CCDC115
RIMKLB
REN
TNFRSF19
RAF1
CLEC12A
AKT1S1
TPR
ODR4
PEAK1
HMG20A
CEP85
C11orf49
NHS
CCDC130
SLC30A6
ZNF527
ZNF687
TIMM9
KIAA0586
C6orf118
CALD1
NUP205
IPP
NR1H2
NEK2
SREK1IP1
CWC27
CORO1C
C11orf65
DYNLRB2
VPS33A
ANXA11
RPAP2
GLMN
ADNP
STOML2
UCHL3
COMMD6
PPOX
EMILIN1
ZNF48
FOXP1
ATP1B1
MYLPF
ST6GALNAC2
SEPTIN1
FEM1C
PLEKHM3
ALG10
CHMP7
AGPAT3
ZNF56
BCAR3
SCAND1
HDAC2
RWDD1
CORO2A
ECHDC1
CD2BP2
LSM5
AVL9
WDR55
SRP9
C2CD5
DRAM2
CEPT1
APRT
ZNF561
LIN54
FBXO44
FBXO2
CDK12
SLC41A3
GRM4
STAT6
SLC4A8
ZNF442
GALNT6
JUN
SH3RF2
B3GALNT2
LMNTD1
MRPS31
SF3B6
FAM228B
PDE7B
CCDC124
HIPK1
HIGD2B
BBS4
FCGR1A
BCL10
GRAMD1B
ZNF345
FABP6
DPYD
USO1
TLR3
GLIS2
NOL12
FNTB
SCYL3
FLRT3
TMA16
PRPSAP1
UBE3B
KCTD10
TLE3
SULT1C2
FAAH
TATDN3
NSL1
SNX17
EIF2B4
METTL18
C1orf112
LURAP1L
PLAC8
YTHDC2
TTC3
TSTD3
TDP2
ACOT13
IPO4
RPS12
SYAP1
TMED1
C3orf14
MEGF8
B4GALT3
RSPH3
APOL2
CTH
SRCAP
LOC730183
ERAL1
CLN3
APOBR
CD55
RGL2
SLFN12
SDHAF3
ARL14EP
ICA1L
NBPF1
GOSR1
AAAS
SNAPC5
SNCG
MMRN2
ZNF331
CHST4
SLC2A7
CCNL1
SLC43A2
GOLM2
OSGEP
APEX1
NAT10
TFB1M
SBNO1
SYNJ2BP-COX16
SYNJ2BP
IGFL4
HMGB1
USPL1
ZBTB8OS
RBBP4
SFXN2
ARL3
TTC30B
NPAS4
CYB561D1
GTPBP10
VPS25
IARS2
BPNT1
EXO1
ZFYVE1
ZNFX1
MTERF4
MIER1
DNAI4
ZNF2
INPP4B
MTIF2
ZNF385A
ABLIM1
CSTF1
AURKA
UFL1
AKR1A1
TTLL1
ZNF286A
HMGCR
BRMS1
B4GAT1
INKA2
DDX20
MEIG1
DCLRE1C
SOCS6
NEK4
GLCE
NRDE2
SESN1
CEP57L1
LIG3
TCTEX1D4
BTBD19
HAUS6
SOD2
WTAP
QRICH1
LAMTOR5
CALHM4
ATP1A1
R3HCC1
TPM4
COA7
ZNF585B
ACTR3
TOR1AIP2
TOR1AIP1
COG2
CGGBP1
C3orf38
HECTD1
GPN3
FAM216A
RPL26
PHIP
ZNF221
SNRNP35
CUL2
CRNKL1
CFAP61
AP3B1
TTC14
CRY1
CYB5R4
SRSF11
LRRC40
ZSCAN26
SPAAR
ASF1A
PSMD6
COMT
TMEM247
TRAFD1
CEP162
LACTBL1
SULT2A1
SCGB1C2
SCGB1C1
MRPL40
HIRA
SPATA5
NUDT6
CZIB
PXT1
KCTD20
SPG7
LMNA
SYDE1
SMU1
TAF13
MAGOH
SERPIND1
FKBP8
PDE12
BCL6
RPL34
TMEM120B
STK32C
SFSWAP
VPS29
RAD9B
GPATCH3
KIAA0319
WDR5B
ABCD2
RIMBP3C
RIMBP3B
UBE2L3
HDLBP
PRR14
GPATCH4
GPX8
TTC38
PKDREJ
SRP54
TMEM138
CYB561A3
SHC3
TRIM59
LRIG3
NUP54
SMIM13
CUL5
MRPL11
RNF220
RIMBP3
MRPS33
PCBP2
PARPBP
NUP37
ASXL3
RNF216
NSUN4
H4C14
MAP3K7CL
FOXP4
CCT8
EFR3B
PBX3
TMEM114
CCNT1
NAV2
RSPH4A
MAST4
MYO1B
GRN
OAZ3
DEK
TTC21B
PLEKHA3
FKBP7
ELOVL1
PLPP5
TSKS
AP2A1
ADGRL2
COA3
CNTD1
PHLDB2
IFIT3