ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
KCNJ15
ADAMDEC1
MTRNR2L8
MTRNR2L2
MSH3
DHFR
KRBA1
WDR74
RAB37
CLDN18
MTRNR2L1
SMCO1
TSC22D3
PAXBP1
GBA
TTLL1
RGPD2
RGPD1
OR4K17
LCE3A
LCE3B
GOLM2
APOA1
DCP1A
RAPH1
UBC
TRIM48
FBXO31
RBBP5
BSDC1
ILF2
MMEL1
ZNF317
TMEM89
ST20-MTHFS
ZNF761
HTR5A
H4C8
TDP2
ACOT13
DUX4
MATK
C19orf18
NDUFS7
DEFA6
LOC102724265
FRG2C
TOP3B
FAM184A
MTRNR2L9
FAM209A
TARS2
SNAP47
JMJD4
HSD17B6
COX16
TBC1D19
CCDC130
SLC44A1
EIF2D
B4GALT7
SUB1
USP30
TRIM9
FRG2
DEGS2
CABIN1
NCOA7
PRSS38
FUT8
CXCR2
RAB11FIP1
COMTD1
TPM1
ITGB3BP
EFCAB7
TNFRSF13B
TEX38
ATPAF1
ZMYM3
FAM227B
DTWD1
RAD54L2
OR4X2
NUF2
CDHR1
TMEM43
CHCHD4
NCBP3
COMMD2
NPAS4
ATP5MC2
ZNF76
TSPAN10
NPLOC4
TMEM259
CCDC88B
SLC33A1
RPS14
CASC3
WDR11
EPS8
RD3L
MRPL38
TATDN3
NSL1
BCL9
S1PR4
SAMD4B
TACO1
STK39
S100P
FAM174B
DMAP1
KNL1
CALM1
BARHL1
JAK1
UBE2F
AURKAIP1
TINAGL1
PIGW
MYO19
IRAK2
BCR
GPD1L
WWOX
WDFY1
SNX19
NGB
LEP
PDE7B
ANAPC1
PPP6R1
IQSEC3
BLK
ATP1A1
MAP3K7CL
CORIN
HMGB1
USPL1
UTP3
IPO4
ZNF670
RGPD8
RGPD5
RGPD6
MTNR1B
TOR1AIP2
TOR1AIP1
ZCCHC4
PDE8A
TTYH1
GNG13
TRIP4
STX18
RRP15
KRTAP9-6
DRG2
OR2AP1
KATNBL1
SYT3
ACYP2
GRM4
DPH6
TMEM229B
MTF2
EPRS1
CNTNAP4
METTL15
KIF18A
BAIAP2L2
ANKRD20A1
COL23A1
RPS29
FSIP2
RILP
CXCL8
RERE
KLHL12
RHEX
MZT2A
ZFP30
STRBP
NOTCH2NLC
PDE4DIP
NOTCH2
DSTYK
NOTCH2NLB
NOTCH2NLA
FETUB
FOXN1
CCDC92B
MRPL21
IGHMBP2
GNAL
COPS4
DUS1L
COG2
PRSS22
NCOA3
RPS6KB2
IAPP
C2orf88
TEFM
POLE4
FAF1
PCYT1A
KRTDAP
IGFALS
FAM98B
ALG10B
FRG1
SCIMP
CDC73
NUDT15
ZER1
TAF1C
ADAD2
THEM4
MFAP3L
MKRN2OS
MKRN2
COL6A1
LHX6
STX16
HARS2
HARS1
PLK1
RHOG
CACNG4
RPS7
NINJ1
POR
FAM72B
CLEC19A
CLTB
RNF217
TTLL12
ALKBH3
ZFP37
SH2D6
ARSD
MED23
POLN
HAUS3
UIMC1
NEUROD4
PCDH1
SF3A3
FAM160B1
ELAVL3
SPTBN4
BLVRB
SDHAF3
MUC3A
CYP17A1
SNX16
SELENOH
STX6
SLC24A1
AGK
DOCK3
CCDC200
DCAF10
RBBP8NL
CCDC107
POLG
ZPBP2
IKZF3
ZMPSTE24
SMIM17
ADPRH
CD55
CAPN2
NPW
SHTN1
SLC25A51
NSFL1C
NAB2
NUP107
INTS5
MRPS14
CRH
RABGAP1
TMEM242
TTC26
MFSD4B
CDK3
MTR
CEP72
MDM4
SLF1
KIAA0825
CSRP1
IFIT1B
CDK5RAP1
NR1H3
ACP2
RHOT2
FGD4
ISM1
DGAT1
TRIM52
ITGA7
HIBADH
ATAD2B
RDH5
BLOC1S1
TLE5
MRPS31
TMED1
GPAM
ZNF527
CFAP73
CALCB
ADNP
PACC1
ATG4C
ABLIM1
RBM25
TFAP4
SNX18
GTF2H4
MRPS18C
HELQ
LTB4R
LTB4R2
CIDEB
VWA1
CCDC115
PRKG1
CERS3
C1orf68
FBXW7
LIMCH1
OR10A3
SSBP1
CCDC174
PARP2
SRFBP1
CREG2
TNFAIP2
ADRM1
DOCK7
MT1X
NUAK2
RAF1
TRANK1
CEBPA
AKIRIN1
SYT7
HECTD2
CBX1
USP2
DPP9
XKR8
FAM214A
TPK1
BUD13
ZNF35
GSTO2
AP3B1
SAAL1
KLKB1
PXYLP1
CTAG1B
CTAG1A
GINS1
RNF187
AARS2
MT1A
PUM1
TYW3
CRYZ
CORO7
SACM1L
CLUAP1
C16orf90
THG1L
FAM25E
ZC3H6
SYK
C12orf43
ZNF829
ZNF568
KCNB1
AADACL4
YPEL3
FAM153B
SNCG
MMRN2
PDE11A
ANP32D
TATDN2
TBX6
GORASP2
CFHR4
EXTL2
MBOAT4
TLR2
SULT1C3
ZNF572
FEM1C
APOBEC3B
ZNF324B
ZNF117
BCAR3
LMLN2
BAAT
ADCY10
GSTM5
ZNF562
SARS2
MRPS12
TXNRD2
SLC1A7
RBPJ
COL18A1
SCCPDH
YWHAQ
MAPRE2
APOL4
NARF
RABGAP1L
CAT
ACAA2
ARHGAP39
MON2
GPRC5C
DUSP6
SLC27A5
ZNF623
RFC1
TMEM62
C1GALT1C1L
CYBC1
RBM33
PNPLA7
SUPT6H
SDF2
PDCD7
DBNDD2
SMIM31
SDR42E1
JMJD1C
FASTKD1
MAD1L1
GALNT1
SUMO3
SEM1
PRRT1B
SLC2A7
C16orf54
PEX3
ADAT2
FRA10AC1
SATB1
MMACHC
FAAH
RPL27
NFE2L3
RBBP9
C3orf14
RPL11
TTC32
ACOX3
RNASET2
OAZ3
CEP85
SUPT7L
SLC4A1AP
LUC7L2
REM1
DEFB124
FMC1-LUC7L2
FMC1
ZNF577
LSS
ACTL8
TMX2
MED19
MSRA
SCGB1C2
SCGB1C1
TRMT44
CALD1
THOC5
ZSCAN31
EFCAB10
PIN4
DNAJC25-GNG10
DNAJC25
TMEM14C
ZNF566
YJU2
NME1
SLC38A9
INTS12
GSTCD
CANT1
TMEM44
TEX50
ZNF32
KDM3A
COLEC11
NOS3
DLAT
RPL37
REEP3
RMDN2
DUSP16
MNAT1
CALCRL
LSG1
LARP1
ACSM2B
POLR3B
ADI1
CADM2
CASP10
SKP2
LMBRD2
ATP9B
GTF3C3
TMEM41A
DNAJB12
METTL25
CCDC59
NEMF
GTF2A1L
PSEN1
STC1
PPIP5K2
FABP6
SERHL2
DHRS2
GTF2H2
RTCA
TMBIM4
TFPI
PAFAH2
CASP4
SAR1B
MOB4
ST6GALNAC6
KDM1A
ZNFX1
SRSF7
SEC22B
RTTN
ZNF792
VTA1
NMBR
MROH7
REXO4
ADAMTS13
DEK
CD14
DPY19L4
PIK3R1
DISP1
GABPB2
TRMT5
SLC38A6
TBCK
AIMP1
VN1R4
PRDX3
MAIP1
KANSL3
FER1L5
TMEM68
TGS1
GCNT1
STAT3
CLEC12A
NME4
TFPT
PRPF31
TEX46
ZNF556
CNOT3
CLK4
ATF7IP2
MTERF4
KIF2C
WDR36
ATF7IP
ESR2
EIF3F
BANP
MRPL44
ENG
KMT2A
SAMD4A
NDUFB3
FAM126B
ZNF408
ARHGAP1
POLR2J3
FGD3
TIGD2
RTP3
SLTM
MRPL30
MITD1
LCN8
RAB30
CDYL
ZNF30
GTF2H2C_2
GTF2H2C
YY1AP1
DAP3
STK19
SPAAR
DXO
ARRDC2
CCDC97
INO80C
PPP1R3B
HERPUD2
TAAR9
TTI2
MRPL40
HIRA
INPP5F
CFAP298-TCP10L
CFAP298
ZNF391
ZNF426
RCHY1
H4C11
CLDN4
KLHL41
SLC45A4
MTIF2
H4C12
IQCF2
PSMF1
OR8B3
COX7A2
SLC35G5
PMF1-BGLAP
PMF1
OPA1
LMBR1L
BNIP1
PRKAG2
UBE4B
ZNF841
S100A9
SLC41A3
POLR2J2
NUP54
IL36A
BAIAP2
LBR
CCDC150
RCAN1
SNRPB
CCNC
TBL1X
PPIG
NUDT9
TULP4
PARP15
DNAJB13
IL21R
MRPL48
KLRD1
TMEM79
SMG5
GFM2
C8orf37
GLIPR1L2
C18orf21
COPS7B
SMG8
BMS1
ATR
TTC5
OR1E3
NBPF1
IFT88
PES1
REN
PDCD6IP
LRRC61
XKR7
BRF2
ANK1
MRPL1
ZNF554
CD200R1L
MTOR
THOC2
DGKQ
SNIP1
DNALI1
GALK2
IQGAP2
ZNF292
C1orf167
RAB6D
CATIP
PRIM2
ASPSCR1
KLHL20
AKAP10
MS4A1
TMEM202
AUH
IL36RN
IL36B
GSTA4
TSFM
ZNF772
LRIG2
FGF1
SGCE
PEG10
CELF2
MRPS23
ZNF134
EIF1AD
BANF1
ZNF383
FAM133B
SEL1L
OPRL1
LKAAEAR1
CYP4X1
N4BP2L2
HACL1
BTD
ZSCAN25
TTC23L
FANCI
TRUB2
EPB41
COQ4
PHB
ZNF165
PRSS41
MTBP
MRPL13
GTF3C5
SCMH1
PLEKHM3
SF3B6
FAM228B
IAH1
CCDC83
SLC35A3
PDRG1
RUVBL1
EML2
HYOU1
ZNF582
TUT1
GTPBP3
ANO8
DDX18
SCNM1
LYSMD1
ARID1A
LSM5
ZNF280D
NAT8
ZSCAN22
CENPV
CCDC88A
SMU1
DHX16
TGFBR2
SH3BP5L
ZSCAN30
C10orf88
LRP6
COA6
TMEM222
VPS13B
ZNF677
VN1R2
NECAP2
RPL5
CLTC
ZNF385A
SNX17
EIF2B4
RBM45
CLUL1
CEP85L
HYAL1
RMND1
ARMT1
NOP16
HIGD2A
TMPRSS7
AVL9
HIP1
ERBB3
SCAND1
CPPED1
ANXA3
SMARCD2
TMOD1
ISY1-RAB43
ISY1
C17orf75
MRAP2
WDR55
EIF3E
PUS10
PEX13
AFAP1L1
FBXO38
R3HCC1
PIH1D2
NKAPD1
TMEM101
SUGCT
MPLKIP
GLO1
COPS2
HSPE1-MOB4
HSPE1
HSPD1
CT45A10
CTAGE8
CTAGE4
ALG10
SNRPD1
TMA16
METAP1D
ABCC10
MACC1
DHTKD1
ERICH3
SEC13
ALG14
FGFBP3
COX8C
RPS15
GRPEL2
DRAP1
C11orf68
SREK1IP1
CWC27
CBWD5
TTC4
HEATR4
ARID3B
CCNI
HEATR1
GAS2L3
CBWD3
CCSER2
HAX1
PTDSS2
SMG7
ACTR3C
POLDIP3
GASK1A
SMIM13
CCR6
SPARCL1
LGR5
AQP10
ZNF501
LRTM2
RNF125
ANO9
CCDC149
SRRM3
PDE6D
CHD1L
PRPF18
FBXL12
CD248
RNF6
PHIP
DNAJC24
DCDC1
POLR3E
EEA1
NBN
METTL9
TPM3
CEP120
ZBTB45
NRBP2
CLASP2
RPS3A
SNRPB2
ZMYND8
SLC35E2A
HUS1
PRKAR1A
MAN2C1
WBP1
INO80B
NDUFS3
METTL8
KBTBD4
DCAF17
TTC38
PKDREJ
SOD2
AIG1
ZNF609
PFKM
APRT
MRTFA
DDX1
RPL7A
MED22
DCLRE1B
AP4B1
FLT3LG
MED18
ZFP42
RPS20
MRPL3
TARS3
HDAC2
C5orf34
ZNF546
CCAR2
C8orf58
MTHFD2L
NFIB
CCNY
ZNF561
ALDH7A1
CRKL
ABCG1
ARHGAP19
LIPA
SLC35B1
TIAM1
SRP9
TMEM114
PCP4L1
PRELID3B
MLEC
GARS1
AASDH
PIP4P2
ZNF441
ZNF512B
GFI1B
CREM
PRKAB2
PDGFD
RABGGTA
ARMH3
TPM4
MEMO1
PHC2
ZBTB40
PACSIN2
CTAGE9
CASS4
CT45A7
PLCL2
DNAJC6
ARHGEF12
IRF9
KRR1
ATP10D
CNN2
ZNF540
TPR
ODR4
STOML2
NDUFA4
LARS2
ABCB10
PLSCR4
TCTN3
CERS5
NSUN7
CUL5
B4GALNT2
UBOX5
FASTKD5
RIF1
ORC4
MBD5
SEC23B
RPS26
PRKAB1
NOL12
GATAD1
TMBIM6
NMNAT1