ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

CCDC200
MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
BSDC1
MAMDC2
KCNJ15
GALNT1
SUPT7L
SLC4A1AP
WDR74
AADACL4
KDM3A
ZNF408
ARHGAP1
ATF7IP
TARS2
RPL27
GABPB2
RCAN1
C19orf18
SF3A3
COL4A5
COL4A6
LGALS3BP
DUX4
IRF6
COX16
MTRNR2L2
MSH3
DHFR
PPP6R1
MMACHC
KRBA1
TMEM79
SMG5
NDUFB3
FAM126B
COX7A2
CDIPT
NME1
PRSS41
PIH1D2
NKAPD1
FCGR1A
ARTN
COPS4
APOA1
AURKAIP1
INTS5
MTF2
RPS26
ARID1A
HDAC8
TUT1
PRPSAP1
CLPTM1
EVPL
RBBP5
LY6K
DNAJC16
CASP9
PLA2G2A
MED18
RPS7
AHCYL1
TPM3
TBL1X
SMG8
RABGAP1
LIMK1
EIF2S1
ATP6V1D
DHX16
ZNF806
CCL20
ARHGAP39
CALCRL
STAT3
KDM5C
SLFN12
WBP1
INO80B
SLC33A1
SELENOH
STC1
SLC9A1
TCTEX1D4
BTBD19
ZNF226
HAX1
RFFL
SERPIND1
AIFM1
UBB
PAXBP1
CCNI
EIF3F
BAIAP2
GPC6
TNFRSF1B
CELF1
MAP3K14
RBM33
CDK12
RGPD2
RGPD1
GTPBP3
ANO8
ZNF540
ZNF571
ZDHHC6
VTI1A
WDR83OS
WDR83
MAN2B1
TIMP4
RMND1
ARMT1
MTBP
MRPL13
KDM1A
TEX46
RAG2
IFTAP
STK40
DUSP6
SNX27
GTF2H4
PSMB7
ABRACL
THG1L
ARMCX5-GPRASP2
ARMCX5
COL23A1
IGFL4
SSBP1
ZMPSTE24
COL18A1
CANT1
PPIL3
NIF3L1
AKIRIN1
ILF2
PACSIN2
BCL10
ARHGEF2
PDE4DIP
RCAN2
ELFN2
LRIG2
SLCO1A2
RPH3AL
LPIN1
PPIP5K2
REXO4
ADAMTS13
PLEKHG1
ZNF331
RNF125
NID1
ZNF585B
ALG14
UTP3
TTC26
ISY1-RAB43
ISY1
NOL12
RPL38
MICALL1
DNAJC25-GNG10
DNAJC25
CCDC174
AP1G1
MRPL11
TFB1M
IL17F
ZNF56
DDX41
MRPS23
VTA1
NMBR
EFHD1
TRIM5
TRIM22
DUSP14
YWHAQ
RAD51AP1
C12orf4
C1orf174
KAZN
EIF5A
ASAP3
GBA
DNAJB12
RPA2
PRRT1B
ZNF383
RHOQ
ATP6V1E2
ZNF790
UQCRC2
TMEM242
SYAP1
PPRC1
CSNK1E
UFC1
ZNF165
B4GALT3
ZW10
HAPLN2
FAM124B
TTC39C
DLX4
CELA2A
RPL11
MRPL30
MITD1
PIKFYVE
C3AR1
NEMF
TMEM101
ARMC1
TRMO
THEM4
PES1
YPEL3
TBX6
ARID3B
TIMM10
TRUB2
COQ4
TOMM40
CASP10
LRP6
FRRS1
BNIP1
SCARB1
TMEM247
SEC22B
ZBTB25
ZBTB1
IFI6
ZNF688
UBE3B
KCTD10
RNF207
TBC1D19
FAAP20
RBM25
MED11
RHOD
CD14
TFPT
PRPF31
SNX17
EIF2B4
PEX3
ADAT2
GTF3C3
NCOA7
DPP9
FAM89A
PDE12
HEATR1
GPATCH3
ZRANB2
CLDN7
ADRA1A
MAST2
LSG1
PTDSS2
ANO9
SLC25A53
ZNF577
RAB30
NR1H3
ACP2
INKA2
DDX20
ZNF461
SIN3B
ADAT1
CTSK
KANSL3
FER1L5
PHC2
TNPO3
PLK3
VPS52
RPS18
B3GALT4
RPS24
POLR3A
KRT19
SLC35B1
WSCD1
BAHCC1
ZXDC
SNRPB
PARP15
SCMH1
BORCS6
DCUN1D2
YJU2
RERE
PSMD3
ECPAS
ISLR
IPO4
UFD1
CDC45
ZNF585A
TNFRSF1A
PAFAH2
MTR
STX1A
SLC39A9
ERH
PCNP
TTLL2
MDM4
RABGAP1L
EIF3E
TIMM22
HEMK1
C3orf18
AMHR2
ALG10B
RUVBL1
POLR1H
HEBP2
ZNF510
ZNF335
TAF12
TRAFD1
TRPV2
CDK5RAP1
DDX18
CHMP7
ANKRD13C
MAN1C1
SHOC2
BBIP1
COMMD2
TEFM
EPRS1
PIGL
NCOR1
FAM184A
CCNC
TM2D1
SPHK2
RPL18
FAM83E
SULT1C2
OCIAD2
NEURL4
RCC2
ZNF750
SNRPD1
PDE10A
CEP120
CLASP2
PRDM1
PREPL
CAMKMT
GYPC
ATP5MC2
CCDC97
LIG3
FRA10AC1
COIL
TTC14
ZNF221
NOL8
CENPP
TTI2
AASDH
PHF5A
ACO2
ZBTB40
POLG
SMIM12
FBXW7
DDX42
CCDC47
MTHFD1L
DHX8
FAF1
TMEM259
CNN2
NEK2
KAT7
FAM222B
FAM209A
TTC32
POMGNT1
LURAP1
PSMB6
NR1I2
S100A11
SEC16B
DMAP1
CCNY
USO1
NUF2
MED23
SESN1
CEP57L1
AKR1A1
GADD45A
GMEB2
DYNLRB2
SLITRK5
SLC1A3
MROH7
PLCD3
ACBD4
IPO13
RPL26
SH2D5
DAPK3
CREM
RBL1
ARMC7
TIMM9
KIAA0586
TBC1D9
BANP
NBPF1
SRSF1
CMSS1
OAZ3
PXT1
KCTD20
ZNF2
TUFT1
LYPLA2
SCP2
TRAPPC8
ZNF260
METTL25
CCDC59
DHRS2
MRPL1
PCBP2
ANKRD17
AAAS
PDSS2
NYX
GTF2B
GALM
INTS2
KIAA0319
SGMS2
TMEM128
LRRFIP1
LACTBL1
GLIPR1L2
ARL14EP
PEAK1
HMG20A
ZNF793
EFCAB14
WDR11
CCDC107
MRPS33
MRPS15
ZBED9
GOSR1
KDM8
JMJD1C
MOB4
CALD1
KRR1
CNGA1
ZNF484
DBF4B
RTTN
SREK1IP1
CWC27
FDXACB1
C11orf1
HIRIP3
RPL37A
CLN3
APOBR
KIF2C
CCDC115
UIMC1
CPD
CZIB
ZBTB45
NR1H2
RFXANK
BORCS8-MEF2B
BORCS8
TTLL12
C11orf49
CDK19
AMD1
WDPCP
MDH1
PHB2
NFYC
PPIH
CDC5L
SUGP1
MAU2
STBD1
UQCRH
LRRC41
SNIP1
DNALI1
OSBPL8
MYO1B
IRF9
ZBTB8OS
RBBP4
PRRG2
NOSIP
CORO1C
KDM6B
FBXO46
MTMR11
C19orf48
AJUBA
EIF3D
SCT
CDHR5
SH2B1
INTS4
RAB42
CDK14
DNAJB4
MRPL45
NCF4
TM9SF4
FUBP1
SUGCT
MPLKIP
NME7
BLZF1
GABARAPL1
NRDE2
BRF2
ATG4C
SF3A1
CCDC157
PRDM4
WDR36
ZSCAN30
PDE7B
SMARCD1
CORO2A
LIMA1
UTP11
TNFAIP1
IFT20
ZNF572
INO80C
CYB5R4
RSPH3
MLX
COASY
KCNH4
HCRT
MYCBPAP
RHCG
TMEM30A
PRKCI
MTRNR2L10
TRMT1
NACC1
GABPA
ATP5PF
MAP2K3
JUN
MRPS18C
HELQ
NOP16
HIGD2A
MYO1H
TANC1
RIMBP3C
RIMBP3B
GPX1
BNIP5
ABCD2
ZSCAN4
TPK1
EMILIN1
CSTF2T
PSMD9
HPD
SLC35A4
APBB3
BEST4
CES3
ERICH4
MED16
DMAC2
CALCB
ZNF302
SF3B5
TIMM50
WASF2
TBX18
F2RL1
SUMO3
MNAT1
STARD10
GDF6
ASB5
ZNF350
DNM2
CASQ1
ATP5MC3
LMNTD1
SCNM1
LYSMD1
ZNHIT3
CHST4
ETFBKMT
UBQLN4
LAMTOR2
ZBTB7B
GFM2
MIDEAS
HAUS4
NHLH1
TSFM
SOD2
DCT
SPRR2F
WTAP
SIRT4
NEK4
POC1B-GALNT4
POC1B
GALNT4
WDR5B
FBXW10
C8orf37
MVB12A
TMEM41B
ADPRS
AAR2
TEKT2
CYB561D1
KXD1
CRADD
MBNL2
TTC9B
AP2M1
RTL9
LSM5
AVL9
SCYL3
NOL11
LMNA
CHRNA9
GLCE
HAAO
ARID2
UBQLN1
FOXO3B
DCTPP1
CSF3R
CDH1
SAT1
SLC25A44
NUP54
CGGBP1
C3orf38
PTAFR
CYB5R2
PRKCSH
CCDC151
IARS2
BPNT1
RC3H2
ACTR6
TEF
THOC2
TMBIM1
RUFY3
LOC100509620
UBE2F
NDUFS7
TMED1
ZNF570
ZNF569
EIF4A2
CEP162
RBM8A
SFSWAP
SRFBP1
TXNRD1
SRRM1
FGD4
HBS1L
S100A13
KIF20A
BRD8
NHS
S100A1
BORCS7
ZNF48
RCC1
PLPP5
USF1
MYLPF
RIN2
SEPTIN1
CPN2
TCIM
RPS29
FAM13A
STAT6
SLC4A8
TRMT11
TAOK3
NRL
ZMYM6
SLC7A11
GALNT6
DCAF11
MTUS1
RAB33A
CCDC130
CFAP298-TCP10L
CFAP298
CCNT1
RPL22
POGLUT3
ASXL3
GSTA4
QRICH1
INPP5A
SLC35A1
TAF15
ZFC3H1
THAP2
MZT1
BORA
CAND1
MRPL48
NECAP2
WDR55
SLC35E2A
ZNF613
SULT2A1
SEPHS2
SLC30A6
ZNF791
ZNF490
MAD2L1BP
LTA4H
GTPBP2
DOCK3
INHA
PSG9
OBSL1
TAF13
SLC39A6
ELP2
HROB
INSYN2B
PSME3
FNTB
HEXIM1
ATAD5
CD2BP2
SNU13
RAI14
TMEM120B
SNX12
RPL7L1
GCNT2
AARSD1
CNPY2
CHKA
FCRLA
CDRT1
THOC5
LZTR1
GPN3
FAM216A
TXN2
RPS12
YARS2
SIAH1
UBR2
KLF3
GNA12
ENDOV
GP5
PLAAT2
TES
GOSR2
TBC1D22A
COPS7A
AKR1D1
C1orf100
AGTPBP1
PYGB
CACNB4
PNPLA7
NPAS4
PMF1-BGLAP
PMF1
RPS3A
RIF1
ADRM1
LRRC29
PLS1
TRIM25
CREBL2
NECAP1
CACTIN
MSANTD3
CTSB
MAPK13
ZNF566
MTOR
C16orf92
ZNF300
TIAM2
ZNF573
HTR3A
AQP12B
C4orf51
GORASP2
DSTYK
DRG2
SPAAR
U2SURP
ACBD5
XPNPEP3
ST13
ARSF
POLR2J3
DDX46
HAUS6
LRP10
NTN1
GPX8
ELSPBP1
BSPH1
RNASET2
PRIMPOL
CASP3
TTC39A
TSPAN3
RTCB
PUS10
PEX13
RWDD1
CALM2
DEDD
SLC18B1
IGF2R
PIK3CB
ARHGEF10L
CDCA3
MAIP1
DNAJC11
TAS1R1
NOL9
DYNC1I2
SRSF4
MAP3K7
RPS27A
CLHC1
ARHGAP9
MARS1
TATDN3
NSL1
GTF3C5
MIS18BP1
IRF2BP2
PLEKHG2
DYNC2I2
CHID1
NXT2
RASL10B
SSR2
HMGB1
USPL1
CFAP20
C2CD5
MEGF8
DHRS13
YTHDF2
ADGRL1
PHF23
GABARAP
RPAIN
NUP88
ZSCAN22
SMG7
UTP25
TENT2
TPGS1
PNISR
CLCN3
PSMD8
KCNE2
RUFY4
ZNF175
PHF12
SH2D3C
TTC5
GNAL
UBOX5
FASTKD5
TMEM107
RPL29
ATP2C1
PLIN3
TRIM46
KRTCAP2
DGKD
AMPD3
NOLC1
FNIP2
TPD52
IAPP
PDXP
LUC7L2
FMC1-LUC7L2
FMC1
ABR
BAG6
APOM
CLASP1
TXNDC17
KIAA0753
ADIPOR1
SIRT3
PSMD13
PKDCC
OSGEPL1
ERAL1
NSUN3
DHFR2
POC5
SH3BP5
TRIP10
ITPR3
GRWD1
ZNF623
CLK4
ZNF391
CUL2
SLC35E4
SRP54
CHD8
ELAC2
ZNF416
ZIK1
OS9
SNRPG
CRTAM
PDE11A
RBM45
TNFRSF19
CCDC90B
ARHGAP24
SULT1C4
SNX3
PUM3
FAM187A
EFTUD2
CCDC103
HSPA5
C6orf118
MTREX
DHX29
FUCA1
TRIM10
TUSC3
KLHL34
LOC102723996
ICOSLG
POLDIP3
TMBIM6
SLITRK1
ZNF20
GSR
MRPL27
EME1
ZNF180
TACO1
SF3B6
FAM228B
PRPF18