ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2059876 | BJAB
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◣ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

SLC1A7
THEM4
SLC2A7
KCNJ15
YWHAQ
TATDN3
NSL1
GORASP2
SGCE
PEG10
APOBEC3B
HYDIN
CCDC200
CENPV
ACTL8
MTRNR2L8
UBE2F
SAMD4B
RBBP9
AUH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FEM1C
MTRNR2L2
MSH3
DHFR
NSFL1C
YPEL3
TBX6
ZNF117
EFCAB12
MEMO1
GPRC5C
CEP72
SPDYE1
DEK
TTC32
RABGAP1
MAP3K2
DBNDD2
CMTM3
IGFALS
NLRC4
RPS29
LSG1
APRT
ZFP30
FRG2C
ZNF324B
KMT2A
MGAT5B
SUPT7L
SLC4A1AP
PSMF1
TMEM130
ITGB3BP
EFCAB7
SEM1
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
SEC23B
SLC25A51
FGF1
POLR2J3
NARS1
CCDC88A
CCDC130
PGBD2
SCGB1C2
SCGB1C1
MAD1L1
PUM1
REM1
DEFB124
RCOR3
EXTL2
CYP2E1
TIMM22
ZNF3
RPS7
LCP2
LUC7L2
FMC1-LUC7L2
FMC1
SPACA3
PRSS38
PARP15
BCAR3
ST20-MTHFS
FAM160B1
MBOAT4
DEGS2
PAXBP1
FBXO38
GSPT1
KDM3A
SLC18A2
NME4
CRIP3
ARMH3
SPDYE17
TOR1AIP2
TOR1AIP1
TMEM43
CHCHD4
OGFOD3
HEXD
RPL27
TATDN2
BRWD1
MAN2A1
MTF2
GBA
EIF4A2
NUF2
PCP4L1
LOC101928841
SRXN1
MAIP1
ATAD2
GUK1
ZNF562
PRKAR1B
PRCP
DEFB128
RPS14
DEFB116
WDR43
FAM133B
TBC1D22A
MTRNR2L1
HUS1
SLC24A1
ZNFX1
C2orf88
TLR2
LCN6
RTTN
ABCB4
LZTR1
SPDYE2B
SPDYE2
UPK3BL2
CYP51A1
CCDC149
HNRNPA1L2
SLC30A6
ARHGEF18
MRPL40
HIRA
VPS13B
INTS12
GSTCD
MAML1
MTBP
MRPL13
RERE
PET117
KAT14
PMFBP1
SPAST
IAH1
YME1L1
MASTL
NPAS4
MED4
POLR2J2
METTL8
DCAF17
ZNF441
GTF2H2
MRPL19
CBX1
SAMD4A
RASSF2
R3HDM4
AURKAIP1
KRBA1
SNRPB2
RNF141
EIF1AD
BANF1
NDUFA4
METAP1D
BIN2
FRA10AC1
FAM184A
PPIP5K2
SMIM13
TMEM65
MKNK1
RANBP1
TRMT2A
MTIF2
SSBP1
EPRS1
NBN
METTL25
CCDC59
SNAP47
JMJD4
SLC33A1
KDM1A
TEX46
FRG2
ERVW-1
GTF2H4
MLEC
SPHK2
RPL18
FAM83E
RB1
FAM98A
DCP1A
SRRT
ATR
TMEM239
C20orf141
COMMD2
NUDCD3
CRKL
SPDYE3
SELENOH
RCBTB2
PTCD1
CPSF4
MRPL44
UFD1
CDC45
SNAP29
PI4KA
HM13
CTAG1B
CTAG1A
CHD1L
PRKAB2
COA6
WDR55
NCBP3
SNRPB
TMEM89
SF3B6
FAM228B
ZNF275
RPS15
ADAM22
PTPRCAP
STX18
SUGT1
RINT1
CCDC150
NUP54
TSPAN10
NPLOC4
ZNF718
ZNF595
UPK3BL1
TGDS
HMGB1
USPL1
PPP1CC
HK1
BANP
DOK4
POU2F2
SNX16
TOX4
RAB2B
MUC3A
TBC1D19
DRAP1
C11orf68
DPY19L4
NOTCH1
DCT
LRRC37A3
WDFY1
IL21R
NBPF1
OPA1
SUGCT
MPLKIP
ZCCHC4
LRP6
HIBADH
TIPARP
YIPF4
BCL2L1
FAM209A
HSPE1-MOB4
HSPE1
HSPD1
PDIA6
PSMG1
GAPVD1
CFAP36
NME1
ZMPSTE24
R3HCC1L
UBB
CLTC
ANKEF1
AP1G1
CCDC97
NEIL1
NDUFS7
GFI1B
TSC1
NYAP1
CCSER2
IBA57
ATXN2
SDHAF3
FAM98B
SPRYD7
NAPEPLD
CA14
SLC9A3R1
CLUL1
TRIP4
ZNF408
ARHGAP1
REN
CRNKL1
CFAP61
DHX58
KANSL3
FER1L5
KLHL22
NDUFB3
FAM126B
ZZEF1
CYB5D2
CA2
PPP5D1
CALM3
ZNF292
PEX5L
TMEM229B
DUX4
MCM7
AP4M1
GNG2
MICU2
GCFC2
SLC41A3
HARS2
HARS1
SLC29A2
TBC1D13
TRIP12
FBXO36
DCXR
RTN4R
WDR74
PRPSAP1
SCCPDH
EMILIN1
NUDT15
OR4K17
PEX3
ADAT2
MTRNR2L9
DYNC1LI2
DCAF10
FGD3
MCUR1
COPS7B
PDE6D
RABGGTA
RPL37
TSG101
FZD1
PIH1D2
NKAPD1
TMEM191C
RRP15
ZNF25
PCYT1A
DDX1
RNF6
SPDYE14
SPDYE10P
CASTOR2
IPO4
LDB3
TBCD
HKDC1
TTLL12
TRMT61B
ZNF891
ZNF10
YDJC
CCDC116
RBBP5
FAM227B
DTWD1
CCDC71L
POLR3B
RPS6KA2
REXO4
ADAMTS13
GALK2
RUVBL1
COPS2
EEFSEC
DCTN4
MRPL48
TTLL1
GSTP1
SYPL1
ARL11
SLC7A11
BCAP29
EDC4
SLC25A13
RABGAP1L
ALG10B
ZCWPW2
AZI2
TRAF6
RAG1
UBE3B
KCTD10
WWOX
GNB2
CBLL1
ACAA2
BTN3A1
MRPS18C
HELQ
MS4A1
NSMCE4A
ZSCAN26
NCOA1
UBL7
CAPN14
ARHGAP45
ZNF341
CCNG2
UBE2L3
CCNI
BFSP1
DSTN
RAD54L2
FBXL13
ARMC10
FBXO11
C2CD4C
FAM170B
C8orf37
MIA3
CADM2
EIF3E
BIRC6
SEPTIN7
SRRM3
LANCL2
MOB4
DHTKD1
IST1
NCF2
UCHL5
RO60
KDM5C
TNFAIP8L1
ZMIZ2
ATXN7L2
ING2
EMC8
COX4I1
XKR3
RBM33
CALM2
GTF2H2C_2
GTF2H2C
DSTYK
TFPT
PRPF31
UIMC1
NMNAT1
LZIC
TVP23B
KDM3B
SIRPA
UBE2D2
ZNF572
RHEX
AP5S1
PCBP2
ZNF436
IFT22
BCR
CT45A10
MRPL58
VRK2
CRLS1
H3-3A
WDR36
MRPS23
IFI44
GOLGA3
TENT4B
DRG2
WBP1
INO80B
RPS26
REEP2
BLOC1S6
NAA35
VTA1
NMBR
UBOX5
FASTKD5
ST6GALNAC6
SUPT4H1
DESI2
TRA2A
INTS5
NCKAP1L
PDE4A
INO80C
RBL1
ZC3H6
SAYSD1
TMEM230
PLCB2
MNAT1
MRPL30
MITD1
ZSCAN25
ZER1
TWF2
PPM1M
VPS50
HEPACAM2
LARS2
SYT7
DNAJB12
TRUB2
COQ4
ZCCHC8
WIPI2
RNF139
DOCK2
TFR2
PTGS1
PRKRIP1
PCP2
STXBP2
NOP16
HIGD2A
PUS10
PEX13
USP32
TCTEX1D2
ETF1
FAM118A
OASL
GARS1
LOC100289561
OST4
UGCG
N6AMT1
ZNF789
C18orf21
DHRS12
SELENOI
ADGRF3
TRAM2
SOCS5
NEDD9
IRF5
DUS1L
SPINT2
KIZ
ANGEL1
UNC50
COA5
PSEN2
RPS20
CDK12
MAPKBP1
TMEM41A
SNIP1
DNALI1
AARS2
CAB39L
SETDB2-PHF11
SETDB2
MRPL42
GPR180
PHIP
NUDT7
C11orf80
GABPB2
MRPL38
NIP7
COG8
MTERF4
PDGFD
ACBD6
TRRAP
MRPS26
GNRH2
CLK4
NFAT5
PLK3
RABIF
SLC35A1
HS1BP3
STX16
SECISBP2L
KCTD5
CCS
CCDC87
TERF2
ABHD12
BRF2
MRPL1
SRP9
ZNRF4
ING3
BANK1
KPNA3
B4GALT7
ZNF333
MRPL3
ITGA4
RNASEH2C
CDC25C
FAM53C
ENG
RBM28
COPS8
ORC5
ZNF337
POLR1F
SLC39A13
ARL14EP
COMT
PTPRA
PBRM1
GNL3
CD300LD
ANKRD36
COMMD1
ADSS2
TENT5B
POLE4
SFSWAP
ASNS
RRBP1
SLC26A11
EIF2D
KRR1
RAD52
CUL2
GABPB1
FPR1
RPS6
POR
NOP56
RIC1
PKM
MARCHF10
CYLD
SCAND1
DPP9
CFAP20
MGST3
TMEM101
CCNL1
SCP2
TAF3
MTX2
THAP7
RTN4
TNPO3
FER
IDH3B
USP15
VPS4A
SPATC1L
ABCB10
SMIM26
THAP11
NUTF2
KATNBL1
PAK2
NT5C3A
FAM234A
CAB39
C1GALT1
WDR70
CDCA7L
SMURF2
WWC1
TEFM
ZNF770
FBXO22
KIAA0895
ANLN
LSM5
AVL9
NAA20
COX7A2
TMEM168
PPP1R14C
DPY30
MMP26
PAFAH2
TUT1
CEP120
SMAD5
FAM76B
CEP57
FAM110A
HCFC2
GLT8D2
SERPINB9
KMT2E
HAX1
PRMT5
CYB561D1
MGARP
SF3A3
ASPSCR1
DDX18
HMOX1
COA1
RNF24
TTC4
EIF2B3
ZNF22
E2F2
SLTM
LONP2
ABCC11
TLN1
CREB3
STRN
DNAJC27
RMND1
ARMT1
ANTKMT
VPS72
TEX261
CCDC78
TTC27
ZMYND15
CXCL16
SLX4IP
MKKS
SKIL
NRROS
POLR2J
CLK3
SCO1
ADPRM
GPER1
PIK3R5
AKAP10
COG2
ZNF557
NDUFA6
PSMG3
ITGB4
CCM2
OR2L13
OR2AJ1
C1orf53
RBCK1
SGK3
DAG1
STAT3
ZNF335
WDR53
FBXO45
C7orf31
MPEG1
ORM2
ORM1
TMEM39B
CAPRIN2
PURA
DTX2
ALG10
TARS3
TIMM10
ATRN
TSC22D2
ZSCAN31
TMEM68
TGS1
METTL9
TIMM9
KIAA0586
CCZ1B
QRICH1
CAMK1D
FOXJ3
NOXA1
GTF2IRD2
GTF2IRD2B
ADNP
CCDC57
MBTPS1
ISY1-RAB43
ISY1
POLR2C
MCCC1
ERCC1
WDR5B
TDP2
ACOT13
SMG8
CATIP
MRPL39
ANKRD40
CALM1
PCTP
HPCAL1
GGA1
WDFY2
ID1
TMEM222
KIAA0319
DTNBP1
DMAP1
SNAPC3
CTDP1
DOCK8
UBA5
ACAD11
IL17RA
POLR1D
LNX2
METTL26
ZNF23
MCRIP2
SEC14L1
LNPK
HERC4
CCPG1
C15orf65
CFAP298-TCP10L
CFAP298
RSAD1
FBXO28
STARD4
KAAG1
DCDC2
RELA
RSRC1
DDX5
CEP95
SHOX2
CHMP1B
CIPC
FHAD1
SIRT1
RFC1
DDX46
TMEM106B
BCL2L13
INAFM2
LCOR
TFB2M
CNST
C10orf88
DGKZ
RNF216
ARSG
IPO13
ZNF570
ZNF569
PPIL4
SCNM1
LYSMD1
RBSN
GMPS
STX8
CFAP52
WASHC2A
WDR17
PSMD12
STK35
NR3C1
ZNF609
FAM217B
PPP1R3D
CCNA2
PTOV1
PRPF18
ABLIM1
PIGO
YAE1
INSIG2
LMF1
ARHGAP19
ABCA3
TTC21B
PLEKHM1
CCDC77
KDM5A
TRIM47
CBX8
UFSP1
MRPL16
TTC14
SDE2
EFCAB2
CSRNP3
RASSF6
DNAJC30
BUD23
OCEL1
AADACL4
UBXN1
LGALS9C
ZBTB45
CT45A7
CT45A6
CT45A3
GOLM2
TAF1B
TPX2
TXNRD2
NR1H3
ACP2
RALBP1
RHOG
ITGB1BP1
CPSF3
CELA3B
CYBC1
CLPTM1
CDC73
TMEM167B
TRNAU1AP
LYPLAL1
ZNF324
TASP1
RCHY1
HEATR1
DHRS13
FLOT2
PRSS27
LGALS1
TLR4
DUSP6
TACO1
NOS3
TSGA10
MTMR6
PDCD6
C2orf15
TRIB3
CALCB
NR1H2
WDHD1
SOCS4
LIMS1
WASL
MED14
LRRC58
CRY2
NSUN5
MTOR
APEH
DENND4B
LHX3
UBE2Z
EIF2B5
SRCAP
LOC730183
CDC25B
QSOX2
CENPB
RASA4
ARID3B
ADRM1
WDPCP
MDH1
ZSCAN12
AQR
HNRNPA0
SEC22B
COPS4
TRMT6
MCM8
ARMC8
RAB4B
MIA
TPR