ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190305 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◣ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

WDR74
KRBA1
MOB1B
PTPRF
ERMN
PRKAB1
TANGO2
BSDC1
DRC7
RTN4
NFE2
MACC1
PYCR2
MTRNR2L2
MSH3
DHFR
BTNL10
ABCB10
MARCHF2
C1orf167
GYPB
SLC6A9
IL13
RNF217
MFSD2B
IL1R1
BNIP3L
GYPE
SLC4A1
SUMO3
MAN2A2
TMEM107
MTRNR2L8
TMEM120A
COL18A1
FKBPL
ATF6B
C21orf58
PCNT
TRIM67
UBE2F
GYPA
EPB41
CASS4
MFAP3L
THEMIS2
POLDIP3
SIRT4
C3orf86
PHF19
SPATA46
PGLYRP4
CCM2
RABGAP1
S100Z
DAGLB
ST6GAL1
MTRNR2L9
SERPIND1
FLVCR1
MGAT5
UCP3
CCDC88B
PPOX
KCNH2
VILL
HDAC6
RPP25
GUCA1B
SLFN14
CLUL1
TRIM63
MAD2L1BP
GTPBP2
IL36A
KSR1
ZNF79
TUBA1C
RINL
SLC43A3
KIAA1586
DEGS2
HTR4
RGPD2
RGPD1
ZSCAN31
FRMD4A
ZNF77
SMCO1
PTPN6
C12orf57
TCP11L2
KCNJ15
SEPTIN5
GP1BB
IL18BP
FKBP8
GPRC5C
ZMYND8
ITGA2B
SCMH1
SLC1A7
SAMD4A
GDE1
CCP110
SLC29A1
BCL7B
ZNF451
PPP1R15A
PLEKHA4
ARHGAP39
HEMGN
DNAJB2
PRAME
CHCHD2
MROH7
NPL
YPEL4
ERMAP
TUBB1
TOP3B
SDE2
ZNF474
SLC45A3
TBL1X
POM121L2
TMBIM1
CCDC200
LARP1
DNAJB4
NARF
AQP1
HERPUD2
TTI2
PRRT1B
YIF1B
KCNK6
DCP1A
CMIP
BSG
CA1
IL1RL1
TMEM74B
PLCL2
C1orf226
FAM83A
RBBP5
TBC1D24
ZNF696
LYL1
LRRC37A3
MST1
POLD4
ALAS2
DSTYK
CHPT1
HDC
ARHGEF12
HSF5
WRN
PURG
FBLN2
ADAMTSL4
NPAS4
SLC2A1
SLC25A42
TAL1
SSBP1
YPEL3
AKAP4
LIPC
GBA
TSPAN32
C11orf21
TNFAIP8
PRKAR1B
SNAI3
NDST1
AQP8
AFAP1L1
STBD1
AIG1
TES
AGPAT1
CD59
CANX
HDAC11
FAM214B
PPP1R14D
ASIC4
RAP1GAP
TXN2
HMBS
GATA1
RPS7
GALNT5
DMAP1
PITHD1
KEL
FBXO9
FAM210B
PACRGL
ARCN1
ALOX12
BIRC2
SPRR2A
TFR2
FECH
RCC1
GORASP2
CPQ
CCDC91
RUNX1T1
CR1L
TNFRSF1B
AP1M1
EPRS1
MRPL40
HIRA
TNFAIP3
KMT5A
ZNF347
VIL1
C1orf100
ZNF718
ZNF595
ABCB6
STRIP2
CBX1
TMEM242
TMEM191C
ARID3B
NUF2
BCL3
OR52A1
BTG2
NFIB
C10orf71
TRIM35
PTK2B
TMEM89
PIGV
SELENOH
SLC3A2
ZNF276
VPS9D1
FOXN1
HAPLN2
PPARGC1B
RAB42
PPM1F
TRIP4
FSD2
LTBP1
SSX2IP
PPIG
NBAS
TMEM9
UTP25
MTHFR
RIPOR3
PLSCR2
TMCC2
ST20-MTHFS
EIF2AK1
CORO1C
TTC39A
BLM
MED23
CHSY1
CIAO3
PEX3
ADAT2
MED18
DOCK7
SLC38A8
DNAJC9
MTF2
SMG8
NUP214
H4C4
ELMO1
PTRH2
POU2F3
AADACL4
DDC
FAM110A
PCIF1
ADAMTS14
CD69
ELOF1
YY1AP1
DAP3
NOS3
ARRDC2
TMOD1
ABCF3
FAM209A
ZNF438
SSH1
HTR5A
TMEM248
OR52N2
RFX1
TPM4
TATDN2
IBA57
TSPAN17
NME1
PI16
SPSB1
TIMM10
IRAK2
DDIT4
MTRNR2L10
INO80C
HK1
RBM28
CNKSR3
C22orf24
OR4K17
STMP1
BCAS1
PITPNC1
GUSB
C2orf88
HECTD3
TEPP
TMPPE
GLB1
KLHL20
LUC7L2
FMC1-LUC7L2
FMC1
AURKAIP1
GUK1
GJC2
SAMD4B
C5AR2
XKR7
OPN1SW
GOLGA5
FOXO3
KIF5A
RBM33
FAM234A
TBX19
HERC1
DOCK9
TATDN3
NSL1
CRYAB
HSPB2
FEM1C
SLC14A1
RAB21
CAB39
RMND5B
LSM12
G6PC3
CTPS1
RAB3IL1
PLIN3
SPINK4
TLCD4
TLCD4-RWDD3
ZNF510
CDT1
SAR1B
STX1A
PSMB6
TRUB2
COQ4
LPIN1
DHH
CDH23
VWA7
SKP2
LMBRD2
CCL28
POLR3B
PPP6R1
ASF1A
CDC14A
HEPH
SF3A3
INTS12
GSTCD
CYP26A1
MAPRE2
WASHC2C
SPTBN4
BLVRB
FRG1
SACM1L
PAFAH2
CXCL6
UTP3
CTAG1B
CTAG1A
INTS5
COX16
ZMPSTE24
OPA1
GCNT2
H2AZ2
SMARCD2
NDUFA4
ADPRS
TEKT2
ARF4
EMILIN2
PRXL2B
E2F1
ZNF385A
TTC26
PRR5
ZNF562
NDUFS7
H4C11
COX7A2L
BROX
AIDA
RCSD1
TSFM
RHOT1
H4C3
H1-6
LRRC8D
TARS2
KDM1A
TEX46
SEC13
ABCC5
PRIM2
RABGAP1L
SF3B6
FAM228B
KIAA1522
ZC3HC1
RHBDD1
KRTCAP3
EIF2D
GPX4
MAP3K8
POLR2E
STK11
DRAP1
C11orf68
RANBP1
TRMT2A
POLE4
ZBTB40
KNL1
USP6NL
NFXL1
CD2
PISD
TMEM259
CNN2
GADD45A
LRRC37A
PRDM11
NRCAM
CCRL2
ZNF391
MRPL30
MITD1
CCDC174
BMS1
SKIL
C8orf37
APOA1
ELAVL3
MAMDC2
SNX17
EIF2B4
SMIM34A
VIRMA
SLC13A3
TMEM43
CHCHD4
PDRG1
BCOR
THEM4
MSRA
TRIM7
SPI1
MFSD12
TRIM17
H3-4
ST7
TLE2
TXNRD2
MRPS15
DDX42
CCDC47
NME4
ZSCAN25
CENPF
SNCG
MMRN2
DNAJB12
FZR1
TFRC
TSGA10IP
P2RX6
H1-0
GCAT
MTRNR2L1
H4C8
SLC24A1
SMAP2
U2AF2
NPRL3
VTA1
NMBR
ZC3H10
RPL41
EEF2K
DPEP3
NUP210L
ATP5MC2
INTS6L
MTIF2
NECAP2
FAT1
F11R
SLC25A37
CYP21A2
DPP9
ADSS2
FAM89B
ZNRD2
EHBP1L1
RABEP2
RPL27
POLR2J3
ELP3
KRT3
AKR1C1
NDUFS3
KBTBD4
ANO10
ABHD5
SPRED2
NDUFA5
SLC40A1
TMEM79
SMG5
SCNM1
LYSMD1
UBASH3A
ZNF317
POLG
TMEM14B
PLXNB3
VAMP5
ZBTB45
HMGN4
LY6G6F-LY6G6D
LY6G6F
ABHD16A
LONRF2
ZSCAN12
KLHL12
ALDH1A2
APOBEC3B
TBC1D19
ZNF792
KMT2D
NQO2
SPN
LSG1
TEX9
RFX7
H4C12
MRPS18C
HELQ
ILF2
TOR1AIP2
TOR1AIP1
GTF2B
WDR70
ATP2C1
GPR89A
ANKRD45
BAAT
SPECC1
ANO1
TACO1
CCAR2
C8orf58
HPCAL1
ZNF408
ARHGAP1
PIAS3
SUB1
TMEM87B
IRF2BP2
AGPAT3
ARTN
HLTF
PTMS
SPDYE14
SPDYE10P
MBOAT4
DHX16
CRKL
SH3BGRL3
BCR
NPAT
ATM
WDR36
RRP15
HTRA2
DQX1
MAPK1
MFN2
RAC2
SECISBP2L
TRIM6-TRIM34
TRIM6
STX18
EXD1
CHP1
C1orf105
TMTC3
CEP290
LEP
SARS1
VCL
SLC33A1
RPL37
CDK5RAP1
HIP1
HINT3
KMT2E
ANPEP
SCGB1C2
SCGB1C1
PSMD9
HPD
RHAG
SCAND1
DHTKD1
ARID2
OR2T1
CWF19L2
UBE2E1
EZR
C4BPB
TENT5D
ADCY10
FAM184A
STK40
EPB41L2
METTL25
CCDC59
ZNF3
ZNHIT6
SLC18B1
RGS20
MUC3A
WBP1
INO80B
ADAR
TDRD10
DCT
BZW2
ANKMY2
PRMT5
CRB1
PRKAA1
SUV39H1
CMKLR1
SLC4A5
FASTKD1
RMND1
ARMT1
EMILIN1
TMEM131L
MAP1LC3B2
LIN28A
MINPP1
YDJC
CCDC116
PCGF5
ZNF316
GSTM5
METAP1
TAMM41
ISG20
DUXB
SH2D1A
HTR1F
KANSL3
FER1L5
MRPL21
IGHMBP2
GALK2
COPS2
SMCHD1
ACTL8
ATG4C
TMEM72
INHA
OBSL1
GPR37L1
MTR
HEATR1
CTNNB1
SERINC5
ANK1
BIN2
ABCA3
RSAD2
ZNFX1
AQP10
ATP8B2
RUBCN
DIP2A
KLHL22
NCOA4
WNK4
RNASET2
ATF7IP2
FAM227B
DTWD1
GTF2H4
MRPL24
ETFB
RHCE
ASB1
SCRIB
EZH1
PDE11A
MTOR
FGFRL1
LPAR5
EIF3F
NCOA7
NUDT9
IL21R
FAM13A
GPX1
SLC35B1
INTS7
DTL
NKX1-1
ANKRD27
RNASE1
RGS9BP
TUT1
RPS3A
C11orf49
OGT
POLR2J
CCDC90B
PFKFB4
PLAU
TCFL5
CALCRL
LOC102724265
PTAFR
CLK3
ERVH48-1
RAB30
CACNG1
CYB5R4
TTC33
PDXK
PLD3
LCN1
JMJD1C
DNAJC25-GNG10
DNAJC25
SLC44A1
ATP6V1F
FPR3
NKX1-2
CAT
REEP3
DBF4B
KLF3
FCHO2
NNMT
CCR6
MME
GPR84
GSTT1
COMMD2
STX16
POLR3E
MRPL16
ZNF331
VHL
NSUN4
ARRB2
MBNL1
RFT1
SMIM33
GCK
PAXBP1
SMG7
ICAM2
SLC12A9
EPHB4
CCNC
DIPK1A
ZMAT2
ZNF785
SPTA1
SRSF7
COMT
SMARCC2
THRAP3
DHX9
MELTF
ZNF609
ATP5MC3
ZNRF4
DYNC2I1
HSPA5
CS
TRMT1
NACC1
TBPL1
ATG9B
ABCB8
BHLHE40
ADCY7
GRPEL2
SAMD1
IGF2R
METTL2B
EIF2B3
ZKSCAN8
WDR24
EMC4
ZNF683
TMEM64
ZNF761
LBR
DDX1
ACSF3
OSBPL5
KRTAP10-9
MAN2A1
KCTD5
KRTAP10-6
SNAP47
JMJD4
AQR
SLC11A2
TAS1R1
NOL9
ATF6
TOR1A
FCF1
AREL1
SHF
NOC4L
TNNI3
DDX51
APOL4
RPS14
RIMBP3C
RIMBP3B
LAS1L
NOL7
KATNA1
NUP54
LRRC61
CCNT1
NUDT4B
NUDT4
RPL5
R3HCC1
CLN8
STAT3
VPS29
RAD9B
NOP16
HIGD2A
RAG2
IFTAP
WASHC1
MTRNR2L6
ARMC1
GP6
BCAR3
ATR
RPS19
SRFBP1
RBSN
ADARB1
ATP5MF-PTCD1
ATP5MF
NEK2
MRPL44
PHC2
PRPSAP1
TMEM44
TFPT
PRPF31
COPS4
SH2B1
MIA3
METTL6
EAF1
ZNF19
MON2
MRPS31
CCNL1
CSTF1
AURKA
DNMT3A
PUS10
PEX13
STAU1
DDX27
ELP1
ABITRAM
ANAPC5
GPR89B
LOC388813
COX7A2
BAIAP2
C18orf21
FAM133B
YTHDC2
ITM2A
MYNN
ACTRT3
PKM
HMX3
TMEM41A
SDHAF3
TMA16
NUP107
SOD2
WTAP
OR2AT4
MRPL1
EIF1AD
BANF1
SRP9
MAST4
CEP164
RBBP9
LSS
IPO4
MAPRE3
RSU1
FAM153B
CEP85
S100A5
S100A4
S100A3
IPO13
FAF1
LEMD2
POLB
YJU2
CLTC
SNRPE
METTL15
KIF18A
TMCC1
ATL3
TGM2
CAV2
ZNF556
DDX18
TPM3
KRR1
PEX14
DFFA
ESYT1
DNLZ
SSNA1
ANAPC2
FZD1
LATS1
HEXIM2
LDB1
RAB37
TPR
ODR4
ITGA7
GFM1
NGLY1
OXSM
RDH5
BLOC1S1
REN
CDK12
ZNF212
UFSP2