ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX391683 | CD34 Hematopoietic stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◣ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

HTR5A
RAB37
GTF3C3
PDE11A
DMAP1
C3orf14
NUF2
OR4K17
FRA10AC1
TBC1D19
INTS12
GSTCD
IQSEC3
HTR4
KCNH1
MED23
SPX
SRRM3
TOP3B
XKR7
SKP2
LMBRD2
KCNJ15
MRPL44
EIF2D
FAM209A
APOA1
RBBP9
ANK1
RAD54L2
PPIAL4F
PPIAL4E
PPIAL4D
FOXN1
S100A9
CASS4
EXTL2
COX16
NPAS4
PUM1
AADACL4
P2RY4
CPLX2
MRPS31
KIAA1549
MRPL21
IGHMBP2
RPS7
PLEKHM3
USP30
BSDC1
HES3
DCAF10
RBBP5
FGF1
TRIP4
TMEM242
ALG10B
PEX3
ADAT2
MTERF4
MTF2
SELENOH
STAC
GDPGP1
CIB1
ADCY10
ELOVL2
SAR1B
SEC13
SULT1C3
MNAT1
SMIM17
RABGAP1
SNCG
MMRN2
BNIP1
AURKAIP1
COMMD2
R3HCC1
GLRA1
DRG2
RPL37
FAM98B
NCKAP1L
YWHAQ
IPO4
CDK5RAP1
DEGS2
DUS1L
GPRC5C
TPD52L1
TGFBR2
DCP1A
GTF2H2
DLC1
TCF7L2
CEP72
TACO1
DPY19L4
M1AP
TTC4
XKR4
GTF2H2C_2
GTF2H2C
PIP4P2
PERM1
CHGB
VSTM1
NEMF
N4BP2L2
CTAG1B
CTAG1A
PRSS22
CUL5
ZNF391
TMEM222
LRRC61
ACTR3C
CRH
POLR3B
CBX1
RABEP1
LSG1
SLC37A2
GFM2
STX18
TTC32
SNAP25
METTL15
KIF18A
VTA1
NMBR
ATR
FAM24A
SAMD4A
SLC24A1
FAM227B
DTWD1
YAP1
CAMK1D
GSTM5
TEFM
ACSL6
CCDC130
SSBP1
CASC3
DNAJC6
RPL27
NEGR1
COPS7B
PDE6D
ALKBH3
FAM160B1
PRELID3B
STEAP1B
SMU1
C17orf75
ZNF770
OPA1
PXK
SLC44A1
SDR42E1
PVRIG
SPAAR
HRCT1
TSFM
SFT2D3
MRPL39
GDPD5
SCGN
GBA
FEM1C
VPS13D
OPRM1
HMGB1
USPL1
KLF14
BAAT
SLTM
SNAP47
JMJD4
CPNE4
FBXO38
SIGLEC10
PRPF18
ADRM1
TMEM229B
SLC8A1
ZNF117
CCDC88A
ALG10
NMNAT1
LZIC
SCCPDH
PAFAH2
PPP6C
RHOT2
PRR23D2
PRR23D1
CLK4
PDE1C
ZMPSTE24
KANSL3
FER1L5
TDP2
ACOT13
TPM1
RPS20
NDUFS7
MRPL3
KSR1
THSD7A
ACOX3
TRMT44
POLE4
FSIP2
PPP1R3C
AKAIN1
RTTN
EPS8
STX16
ITGB3BP
EFCAB7
INSM2
SLC25A51
PIN4
CALB1
TMEM41A
B4GALT7
TMCC3
SMCO1
NR1H3
ACP2
SLITRK1
GNAL
DSTYK
RMDN2
PSMF1
JMJD1C
REEP3
RPS14
LARS2
ANGEL1
CTNNB1
ST6GALNAC6
BMS1
SCG3
CAMK2G
R3HDM2
GRIA2
TRMT5
SLC38A6
EEA1
NME1
CCDC97
TMEM114
RABGGTA
DNAJC24
DCDC1
TMEM89
EIF3E
VWA8
NTSR2
CLVS1
CSGALNACT1
GPR78
GLIPR1L1
CAPS2
NOXA1
ERCC6L2
RFC1
SF3A3
PDHB
MMP7
NUP54
DRAP1
C11orf68
METTL9
NXPH3
WDR31
C2orf88
OR1E3
FRG1
RPS29
VMO1
GLTPD2
MAN2C1
PPIP5K2
TARS2
MEX3C
DNAJC25-GNG10
DNAJC25
GTF2A1L
COQ2
HNRNPA1L2
MED4
SAMD4B
ATP10D
HERPUD2
RAP2C
MRPL40
HIRA
KLRD1
INO80C
MTMR6
ITGA4
IRAK2
FAM184A
SUGT1
DERA
GINS1
UTS2B
CCDC50
AAR2
PSRC1
BAIAP2
SREK1IP1
CWC27
ZFPM2
ADAMTS7
CBWD5
CBWD3
HUS1
CBWD6
WDFY1
SYTL4
NPIPB9
CPA6
GGACT
APOBEC3B
PRUNE2
DUSP6
MARCHF4
STOML2
APOL4
C11orf49
LEP
HSD17B6
NECAP2
TMED1
DLGAP4
EXOC2
SCNM1
LYSMD1
CRP
PPM1H
ZNF579
UBE2F
TTC26
DDX18
MNDA
NCOA7
FAM207A
ZNF296
GEMIN7
TMEM62
DISC1
FGFBP3
ASF1A
ACAA2
MOB4
TMEM68
TGS1
RTP3
DGKZ
ZNF761
WDR36
HRH4
TMX2
MED19
SMIM13
SLC38A9
CTHRC1
PPP1R14C
LAMTOR1
RNF6
YBEY
MCM3AP
NDUFC2-KCTD14
NDUFC2
PDCD6IP
TSPAN10
NPLOC4
NDUFA4
MS4A12
EIF5A2
ADNP
EDN1
RUVBL1
CPEB4
TXNRD2
PLCL2
ATXN7L2
TRDMT1
TFPT
PRPF31
ITGA7
TVP23B
ANKRD46
HOXC6
HOXC5
SNRPB
ALDH3A1
POLR1F
FUT10
NEUROD1
NMNAT2
ALDH1L2
YJU2
MRPS14
PLEC
CLDN4
DDX1
ANKRD40
ZNF829
ZNF568
MRPL30
MITD1
SYN3
FAM133B
RPL7A
MED22
SURF2
SURF1
AQP2
BZW2
ANKMY2
SESN1
CEP57L1
DHX32
CA2
FAM221A
SNX19
GLIPR1L2
AGK
PHF21A
SECISBP2L
ZNF212
CDKN2AIPNL
C12orf73
GPT2
EIF2B3
IL4R
ZFP30
POLR3E
TNFAIP8L1
CTRL
RARG
MAPK1IP1L
TATDN2
TOR1AIP2
TOR1AIP1
TRAM1
HPSE2
PDE4C
NMRAL1
HMOX2
NBEA
MAB21L1
PDE7B
TBCK
AIMP1
KDM3B
OAZ3
THEM4
GARS1
SAAL1
ACSF3
SCAMP2
STK19
DXO
RPL5
ZBTB40
DPH2
KLHL20
L1CAM
LUC7L2
FMC1-LUC7L2
FMC1
SLC35A3
GTDC1
WDR11
NCBP3
OTUD7A
ARL8B
NNT
ANKRD18B
DHRS7
TMEM202
A2M
METAP1D
TEX9
RFX7
DGKQ
AARS2
CXCL2
LGR5
VIRMA
CBWD1
NPIPB6
MRPL58
BIN2
SLC41A3
KNL1
ABR
GPD1L
STAT3
PRMT3
TMEM255A
SNRK
CENPV
MRPL16
PPP2R5B
KCTD6
ATP5MC2
LCP2
BTG3
PCSK1
TTLL12
ZNF426
POMP
DLGAP3
GASK1A
TAMM41
SLC35G5
EPHA3
PET117
KAT14
SLC1A7
MRPL22
GEMIN5
TPM3
LIPA
SNAPC3
NBN
ZSCAN12
CDC73
GOT2
TOMM20L
BTN3A2
GJB2
FOXN3
ANKAR
ZNF501
TAB1
PRDX3
PLCD3
ACBD4
GPR3
NXPE3
CEP85
METTL25
CCDC59
PSEN1
CRBN
ZER1
PNPLA7
NPFF
ZNF609
SMAD5
ACOT2
TMEM60
PHTF2
MRPS18C
HELQ
TRAF6
RAG1
MSMO1
COLEC11
MAOA
EEFSEC
EIF1AD
BANF1
KMT2D
TANGO2
PPIAL4C
PPIAL4A
ZNF324B
SCAF11
NKX1-1
STXBP3
TINF2
C10orf88
ZNF114
MTPN
LUZP6
PRSS38
PTPRCAP
COL9A2
SVOP
CCNF
ATF7IP2
SNRPB2
MTIF2
BCL9
PTPN21
ISM1
RNASE10
MTA1
WDR24
CACNA1G
CYP17A1
CD47
WDR41
FOXJ3
UTP3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CCDC92B
COL18A1
SERHL2
TDRD7
RPL11
C8orf37
LIN28A
TOX2
COA6
TMTC2
CXCL3
THOC5
AGO1
BRF2
PFN3
ZFP41
INTS5
CDH5
TIGD2
VANGL2
RHBG
ILF2
TMEM70
ELOC
EPS15
DUSP16
NFAT5
SPEF2
ARAP1
PSMA3
SDHAF3
LSM5
AVL9
RPS15
LGALS2
ZC3HC1
SORBS1
CHCHD6
ANKRD34C
BCR
CFAP298-TCP10L
CFAP298
C17orf50
PPIAL4H
PPIAL4G
NME4
ZNF280D
VPS72
SPDYA
MTERF1
SLC7A6
SPATA20
PRMT5
ABHD11
SNX1
CIAO2A
CLEC12A
VAMP4
SFTPC
CALCB
COMMD4
SYNPO2
OR1E2
GRAMD4
NDUFAF5
ESF1
GSTA4
ANXA3
SLC35B1
ZNF148
HIP1
WSB2
ROBO3
IQCF2
GDAP1
STEAP2
ZPBP
SPATA48
PSTPIP1
RBM45
LRTM2
SLC35E3
FIS1
NOC3L
SCN9A
C20orf194
C7orf26
ARRDC2
ARMH3
PDE4DIP
MLEC
SRP9
SLCO4C1
STAU1
DDX27
CFHR4
CCDC150
SMAP2
F8A3
F8A2
F8A1
H2AB3
H2AB2
H2AB1
EIF3F
AIG1
RANBP1
TRMT2A
PPA2
TBPL1
ING3
RAPGEF1
MAIP1
RBIS
TTC5
ZNF385A
ABL1
SLC38A2
TUBGCP3
RPTOR
NOTCH2
UBE2L6
KMT2A
NDUFS3
KBTBD4
CCAR2
C8orf58
RAD52
GNG2
COMMD1
MBOAT4
BACH2
ADD2
PCID2
CUL4A
JRK
MON2
GTF3C5
ATP6V1B2
SST
MPPED2
TPH2
YPEL3
TIGD1
EIF4E2
EDC4
NLE1
TMBIM6
CRLF3
BBS1
ZNF292
WDR55
CHD1L
PRKAB2
GPAM
RARS1
WDR47
TIA1
CYB5A
ITGAL
SLC27A5
SMARCD1
CEP164
UBLCP1
CNTNAP5
LRRD1
ATP1A1
SPARCL1
WARS2
PHIP
VPS4A
MAPK8IP2
MAGOH
NFE2L2
ADARB1
CD274
TMIE
ALS2CL
CLTC
PSMD6
TMPRSS12
RNF103-CHMP3
RMND5A
TATDN3
NSL1
CSDE1
ZNF138
HS3ST2
KDR
TAAR9
OR6J1
SLC39A13
SEMA3D
EMID1
SLC45A4
SF3B6
FAM228B
RIPOR2
NRF1
MRPL48
FAM25E
GEM
TMA16
UCHL3
COMMD6
MAPKBP1
AKAP13
TRIM16L
MIER3
RAB24
PRELID1
RARA
FGFRL1
NFE2L3
SYP
GRM1
RTN1
TUT7
AGBL2
P2RY6
TXLNB
ELP1
ABITRAM
TRAPPC5
MCEMP1
MTBP
MRPL13
C1GALT1C1L
NINJ1
GPR62
SLC39A3
SHF
KRAS
CYP20A1
NLRP1
PLEKHM1
SEM1
GATAD1
ACTA1
DTD1
CHRM4
FBXL12
ATP5MC3
GPBAR1
MYOCD
B4GALNT1
ALDH9A1
METAP1
KCNK12
FASTKD1
RETSAT
ELMOD3
CHRFAM7A
MFAP3L
SNX17
EIF2B4
PTCD1
CPSF4
RBMS3
ZFP62
SCNN1G
TLR2
PIK3R1
CTAGE8
CTAGE4
CEP85L
CCDC115
CT45A7
CT45A6
CT45A3
TTLL4
CACNB3
CT45A10
HTRA2
DQX1
CPE
TMEM79
SMG5
COL26A1
INPP1
KDM1A
TEX46
MAF1
WDR97
OR8B3
PNPO
EPHA10
SATB1
CPPED1
SMIM8
NSFL1C
STMP1
ACYP2
U2SURP
GRAMD1C
MTR
KDSR
PDCD2
LRRC10B
ZNF562
SLC33A1
CCNC
ZNF518A
TBC1D13
LMLN2
LIG3
LIG4
ABHD13
PKIB
HNRNPH1
CLUL1
KAT6A
TTC37
ARSK
BARHL1
UNC80
DEK
CA14
F8
KIF21A
PCP4L1
TEX50
OGT
MUC12
TPK1
MACC1
MEGF8
PSMG3
REXO4
ADAMTS13
RPP14
HTD2
OMP
HPCA
DPYD
GAS2L1
IL12A
RPL38
TRMT61B
POLR2C
CSRNP1
CHSY3
SEZ6L
RIF1
STAT6
OTUD7B
PRKG2
POU4F2
TPM4
FAR1
SFRP4
EPDR1
CNOT11
SNTG1
DNAJB12
CLASP2
ZFYVE9
ADAMDEC1
ZNF827
TEX261
TMEM101
GPR37
HIF1AN
TMEM14C
RCHY1
MRPL1
GRIN2D
KDELR1
METTL8
DCAF17
TFAM
QDPR
CLRN2
RNF146
RGPD8
RGPD5
PLK1
RGPD6
TBC1D10A
CENPVL3
ZSCAN25
GCFC2
FAM118A
FAM76B
CEP57
SMARCD2
SETD1A
CEP41
TSGA10
C2orf15