ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089512 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◣ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
TUBD1
RPS6KB1
BCAS3
TRIM37
HEATR6
IQGAP3
BRIP1
ZNF217
PFDN4
FAM72C
FAM72A
USP32
PARD6B
APPBP2
FAM72B
TEX14
RAD51C
BIRC5
NCOA3
PPM1D
NPAS4
UNG
SGO1
BCAS4
CREBRF
HIPK1
CCDC200
FAM72D
DYNLRB2
C3orf14
UTP20
SKA3
MRPL57
MOK
FANCI
CCNA2
ARFGEF2
PPM1E
DZIP3
CIP2A
WDR4
PHTF1
NUF2
TTF2
TICRR
INTS1
NCAPH
DLGAP5
NEMP1
ZNF331
RNFT1
RRP15
TRIM33
RACGAP1
CCT2
XRCC2
YPEL2
NET1
TBX2
KPNA1
BMP7
RNF166
CTU2
FBXO32
TROAP
C12orf66
TRIP13
BRD9
SAP30BP
RECQL5
MAD2L1
VRK1
RRM2
ZEB1
EXO1
P2RY2
CCNB1
METTL1
EEF1AKMT3
L1CAM
PDE4DIP
PRMT6
ATP1A1
FBXO5
KPNA2
DHX40
UBE2C
SKA2
PRR11
KLF10
SIKE1
POLQ
UFD1
CDC45
MCM10
NTAQ1
ZFYVE1
QSOX2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HSDL1
DNAAF1
ESPL1
SLC12A9
DCLRE1B
AP4B1
SPPL2A
CEP55
RAB5B
TRMT61A
CKAP2L
IPO4
ATXN7
THOC7
GABARAPL2
HCFC2
GLT8D2
NOTCH2
CRBN
KIF14
TTK
HTR5A
LTN1
CDC14B
ZHX3
LYSMD2
TMOD2
ZNF706
RHNO1
FOXM1
SEC22A
SUV39H1
PDXDC1
IQSEC3
VANGL1
KLHDC4
KIFC1
WASHC5
NSMCE2
CSTF1
AURKA
TEX2
KIF18B
MLYCD
TTLL11
FAM214A
NBPF1
RAB22A
LCMT1
TADA2B
CCDC96
ZNF367
SUSD6
SURF2
SURF1
NUDT4B
NUDT4
DYRK1B
PWP2
LOC102724159
EDC3
SPATA2
ZC3H18
CCT5
ATPSCKMT
RNF114
ATP5F1E
SPAG1
NOL8
CENPP
ARMC2
DOP1A
MYL12B
SPC25
FANCD2
ZFPL1
CDCA5
BLM
AP3B2
ABCA5
SERINC3
XPOT
TBC1D30
GNS
RAD51
DDX49
COPE
RNASEH2A
MAX
TUFT1
RFC3
POLR2J3
C16orf71
ANKS3
ZFAND2A
CLTC
DHX37
RHEBL1
ZSCAN2
SLF2
CKS2
ATAD2
MYBL1
C20orf27
ATG101
NDUFV1
OS9
RMDN1
CPNE3
NUDT1
MRM2
RSPH1
TMEM231
SCRT1
TTC27
CPLX2
CEP128
GGH
ZNF79
BUB1B
MND1
DNAH7
SLC25A24
TSFM
ZAR1L
BRCA2
NBPF15
PIMREG
KMT5A
METTL2A
INIP
GNA13
MYO5C
SMYD5
CYB561D1
TMOD3
GOLGA3
SMG8
MOCS3
DPM1
AP4E1
KLHL24
GPR89B
TOPBP1
TF
RUBCN
TOLLIP
SLC25A19
TMEM129
TACC3
CACYBP
TSR3
GNPTG
RABL2A
EEF1E1
REXO4
RFC1
SMC2
MRPS23
PSMD12
SRPRB
ZMAT3
TASOR2
FIS1
PRKAR1A
ZDHHC24
ACTN3
LRFN4
RRP12
CCNG2
TWNK
MRPL43
RECQL4
LRRC14
HSF1
BOP1
RIPK2
FBXO33
COQ2
IDI1
WDR37
LRRC29
BICDL1
ASB8
MTFR2
GPATCH4
NAA25
NEIL3
CIT
GTSE1
RUVBL1
INCENP
DARS2
CENPL
CSDE1
SYVN1
ASPM
STRIP1
MBTD1
UTP18
GPRIN1
NEK2
WDR53
FBXO45
NEURL2
CTSA
ZNF778
FBXO43
KAT2B
PPP1R16A
MKI67
RPS6KB2
DMXL2
CRNKL1
CFAP61
DSCC1
ATG14
TSEN2
RAD51AP1
C12orf4
SLC35D2
RPP40
SEL1L
LSG1
TRUB2
COQ4
LRRC59
CHCHD3
AZIN1
LLGL2
SLC25A26
SPC24
SUPT4H1
SARS1
CHD1L
PRKAB2
RPL30
ATP6V1C1
THOC3
TAMM41
DNM1L
TWF1
UBAP2L
C1orf43
DYNC2I1
SGO2
GTPBP4
MON2
BARHL1
MACROD1
TMEM183A
KLHL36
SPEF2
STYXL1
MDH2
SPG7
UBE2N
UBR3
NDUFAF6
CCNE2
HELZ
SNX27
RAD54B
RRP1
PLK1
INKA2
DDX20
CYB561
STX6
MYBL2
NOP9
DHRS1
PTGFRN
PCMTD1
WASHC2A
MCM7
AP4M1
NOP16
HIGD2A
EIF3C
EIF3CL
GFPT1
TRPM7
DLST
HSBP1
RAD18
PGBD5
MCRS1
PPP1R12B
KXD1
ACBD7
CCZ1
FAM193B
PRPF18
DPY19L4
NXF1
TBK1
ESRRA
SLC22A15
RNF44
CCDC86
RNF40
CCDC189
ENDOV
WDR3
GDAP2
HJURP
TCP11L2
XKR7
RABL2B
DDX11
DIABLO
DENND2C
SMC3
TTC8
SCFD2
GTF2H3
EIF2B1
SNX16
FAM200B
KNL1
SLC52A2
FBXL6
VPS13B
NOB1
GDPGP1
CIB1
RABL3
GTF2E1
MTHFD2
INPP5F
DNAJB6
MAP11
IPO11
GLE1
LRPPRC
FAM117B
METTL6
EAF1
RIDA
POP1
CBSL
CBS
TC2N
HMGB1
COA8
BAG5
MRPL52
CNPPD1
RETREG2
GRWD1
HSPA9
CS
MED13
PRKAB1
RTTN
KLHDC10
TPTE
CYP51A1
AUH
EIF3B
WIPI2
DYNLL2
DYNC1H1
NTNG1
GTF3C5
SPOP
SF3B4
DOLPP1
LOC101928764
CCDC150
NGDN
CFDP1
ARFGAP1
ERCC3
WASHC2C
RTF2
NRAS
CDK5RAP3
PIP4K2C
RIOK1
CAGE1
NCKAP5L
DNA2
TSEN54
TRAIP
TMEM203
NDOR1
HEATR5A
BZW1
TPCN1
IQCD
URB1
DDX21
SQLE
RAE1
CDT1
DKC1
CDK5RAP2
SLC27A2
PHKG2
CTDSP2
RAD54L
SHC1
CKS1B
DUS2
DDX28
RMI2
GFOD2
PSEN2
LTV1
CENPE
RAB7A
CDCA3
PLD1
VARS1
LMAN2
TCTEX1D2
BCAS1
ZNF688
CPEB4
NARS2
MRPL11
POC1A
FAM24B
PREX1
SULF2
OAZ3
BRMS1
MRPL3
DEPDC1B
TRAFD1
CHERP
STYX
PITRM1
ANKRD13A
UTP23
SLC25A16
PRPF19
CCDC88A
ZER1
MAP3K3
MARVELD3
SLX1B
SLX1A
BOLA2B
BOLA2
DNAJA3
LSS
OXR1
FBXW2
MYL12A
SCRIB
PPM1H
ZBTB34
HAGH
FAHD1
INTS2
IDH3A
MFSD14B
SPTAN1
EXOC6
PRXL2C
PRKCA
SAR1A
GPD1L
MAPK8IP2
CDK1
MED20
BYSL
FAM227B
DTWD1
TIMELESS
PDSS1
ATP5MG
RRM2B
C11orf24
TENT5C
BRPF1
RPS23
ATP6AP1L
SHCBP1
RTKN2
ARSG
MFN1
FANK1
SLC16A6
GPSM2
TUBA1A
H1-10
TGFBR1
NAGPA
CENPH
RIOK3
PLEKHM3
ADCK1
GMCL1
DSTYK
NOMO2
ALAD
PLEKHM1
ETFDH
C4orf46
GNPNAT1
GINS2
RNF8
CCNE1
KIF2C
STX16
ZSWIM9
LIG1
GLRX5
WDR47
AKAP1
MBTPS1
TTC13
ARV1
CLBA1
PTTG1IP
POC5
SKA1
POLR2J2
TMEM120B
SMARCC1
METTL17
DECR1
ZNF148
TCTN2
SKIV2L
NELFE
CLCC1
ATG7
MSH3
DHFR
OSGIN2
FAHD2A
FUBP3
SCYL2
DEPDC4
SLITRK3
MTMR14
DCTPP1
SART1
PRELID3B
TADA3
ARPC4-TTLL3
ARPC4
RPUSD1
CHTF18
SLC25A13
CNOT2
MTRR
FASTKD3
AKT2
STK10
KIF20A
BRD8
SLC39A6
ELP2
NOL11
SLC45A3
FAM91A1
SEC14L1
ARNT
SEMA4B
PTGES2
CYB5R1
ABTB1
PI4K2A
C16orf46
EBNA1BP2
CFAP57
LIX1L
UTP15
ANKRA2
KIF11
PDZD11
KIF4A
CKAP5
BLOC1S2
CENPBD1
SSR2
UNKL
LSM5
AVL9
CDCA4
PELI3
TOP1
FBXW8
GPR89A
ANAPC5
CHUK
ECT2
EEF2K
STRADA
FIGNL1
CSRNP2
CAMSAP2
PDP1
SGK3
SCARB1
ADCK2
PBK
MCOLN1
WDR77
ATP5PB
NME2
XPO4
PSMD7
PPP2R5E
SNRPE
VMP1
PTRH2
BCAS2
SLC35C2
TMED10
KIF3A
PRIM2
RRAGC
UBR5
NEPRO
FAM3C
NUTF2
CENPT
OVOL2
ATR
STAT1
FAM185A
UTP4
DERPC
CHTF8
FBXL3
COG3
STK3
POLR1B
SHQ1
CENPN
SH3BGR
LCA5L
SPEF1
ASF1B
MXD1
NKIRAS1
FBXO48
APLF
NR1D2
USP10
CD55
TIMM50
CERS5
SFSWAP
PABPC1
CRELD1
TM2D3
PI4KB
SNF8
MTMR12
IKBKB
SUMF1
CCDC146
DIMT1
CNPY3
EBAG9
DUT
PDCD2L
GALK1
TRIM25
POLD1
TBC1D2
SCAI
CPLX1
PIGU
NUP214
PPAN-P2RY11
PPAN
NUP35
ZNF696
PC
SSBP2
CFAP69
ANKRD46
CHFR
AMZ2
FBXO28
MAN1B1
S100A11
METRNL
MARCHF8
WIPI1
FARSB
RBBP5
RBSN
RBM8A
SLC25A32
DCAF13
IQCG
PCNX3
NBN
LMLN
CALU
ANKRD28
CAMTA1
GMFB
NDUFS6
CTSD
NOMO1
SLC7A5
SCRN3
CIR1
EDC4
EIF2B2
SUB1
LATS2
SH3BP5
TOP2B
TTLL9
ODF2
BUB1
TTLL5
ERG28
PYCR3
ZHX1-C8orf76
ZHX1
FAM174A
C5orf34
ZNF789
RNF31
PSME2
EDEM3
RBBP8NL
MEF2D
HPRT1
USP2
BIN3
PSMB4
COX19
NDE1
MARF1
CHRNA5
TMEM65
MGRN1
FAM193A
BOLA2-SMG1P6
PLK4
POLR2J
FAM207A
GSN
FANCM
RAB14
NSUN5
MLEC
UBXN1
RPS13
CSTB
UQCC3
LBHD1
WDR93
PEX11A
UBALD2
APPL2
MPHOSPH8
EIF4ENIF1
CREBBP
GPR135
VPS50
HEPACAM2
COMMD4
CENPF
LARP4
CDIPT
NGRN
PRKDC
MCM4
WDR35
LEKR1
EID2B
ARF3
DUSP23
DNTTIP2
PRPF38B
RMND5B
SIRT7
TXLNG
PDPK1
UNC79
BTBD7
RPIA
PRPF38A
ORC1
HSPA5
PSMA5
POLD3
FPGS
TMEM18
PSMD9
HPD
ENTPD5
BBOF1
ARL8B
INVS
ERP44
CAPN7
CDK11B
CDK11A
SEC61B
C7orf26
KCNMB4
H3-3B
MKRN1
PLCL1
MORC3
SPATA7
FBXW9
NUP107
NUB1
MEA1
FANCC
SPATA4
MMS22L
RABGAP1L
CCND3
MAD2L1BP
GRINA
TMEM260
STRN3
AP4S1
PLXNC1
TTC26
UBXN11
TACO1
DDX42
CCDC47
RECQL
GOLT1B
TASP1
TAF4B
E2F8
SMN2
SMN1
DNAJC9
RIF1
RFX1
VGLL4
DNLZ
XPNPEP1
PTBP3
TUT7
ZDHHC23
RAB2A
KIF27
TRIM28
PRTG
HAUS7
APH1A
HROB
SYT5
CFAP206
GCSH
ZNF324
ZNF507
C12orf73
E2F5
ARPP19
NVL
NMD3
YPEL5
PSEN1
ADCK5
DNMT1
SPAG9
CORO1B
MRC2
DHODH
TCOF1
PKMYT1
NAA35
DYRK3
MFSD14C
KLC1
KCND3
CYP24A1
RYBP
GXYLT1
RRS1
VTA1
NMBR
OXNAD1
DPH3
ZNF408
ARHGAP1
ABCF2-H2BE1
ABCF2
INPP5K
ARL13B
TSG101
RNF19A
SMAGP
MRPL28