ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089511 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◣ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
PSMD6
TRIM37
PFDN4
TUBD1
RPS6KB1
PARD6B
ZNF217
TEX14
RAD51C
NPAS4
NCOA3
APPBP2
USP32
PPM1D
BCAS4
BRIP1
CREBRF
IQGAP3
DYNLRB2
CRBN
DHX40
HIPK1
YPEL2
PPM1E
UNG
C3orf14
ARFGEF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQSEC3
RNFT1
FBXO32
DCLRE1B
AP4B1
NBPF15
TBX2
ZFYVE1
SIKE1
RRP1
SCRT1
SMG8
BARHL1
METTL1
EEF1AKMT3
SKA3
MRPL57
HTR5A
MOK
ZC3H18
MYO5C
BMP7
WASHC5
NSMCE2
PHTF1
DYRK1B
SGO1
AP4E1
KPNA2
NOTCH2
RABL2A
C12orf66
TRIM33
UTP20
RRP15
CCNA2
TTF2
NTAQ1
TMOD3
ZEB1
POLQ
FAM214A
TMEM203
NDOR1
NUDT4B
NUDT4
TPTE
PDE4DIP
RACGAP1
PTRHD1
CENPO
DZIP3
CIP2A
UBE2C
MBTPS1
CYB561D1
ATXN7
ESPL1
XKR7
SUMF1
EIF2D
KLHDC4
SUPT4H1
SLC45A3
LYSMD2
PIAS3
TMOD2
TICRR
ASB8
CCDC200
GABARAPL2
HEATR5A
GREB1
ZNF331
CKAP2L
DDX49
COPE
NET1
ABCA5
L1CAM
PIP4P2
NEIL3
NCKAP5L
FAM72B
ZHX3
ARSG
SLC16A6
NDUFAF6
CCNE2
TROAP
THOC7
RIPK2
C16orf71
ANKS3
C16orf46
ATP6V1C1
FANCD2
VANGL1
FAM72C
FAM72D
OAZ3
NUB1
BCAS1
SAP30BP
RECQL5
SLC25A19
ATG101
DNAH7
RMDN1
KLHL24
PRELID3B
CPNE3
NCAPH
FANCI
SPEF2
ATG14
QSOX2
HSDL1
DNAAF1
LIX1L
PRMT6
ATP1A1
ATAD2
LATS2
LRRC29
RAB22A
MKI67
NEMP1
DSCC1
MRPS23
NBPF1
NRAS
CSRNP2
FAM72A
TBC1D30
GNS
GFPT1
CFAP69
TP53INP1
SPAG1
ZSCAN2
P2RY2
RUVBL1
MED13
SULF2
TANC2
KCNH6
GFOD2
CPLX2
CDC14B
STYXL1
MDH2
AKAP1
STX5
RASA2
PHLPP2
CNPY3
WASHC2A
RNF166
CTU2
NXF1
TTC27
MAPK8IP2
HSF1
BOP1
TSFM
KLHL36
DEPDC1B
SLC12A9
TASOR2
PPP1R12B
SLC25A24
SKA2
PRR11
TSEN2
NBN
ZDHHC17
SLITRK3
TTLL11
PLK1
AZIN1
CCT2
MIS18A
CSTF1
AURKA
TRUB2
COQ4
GNAI3
GPSM2
ZFPL1
CDCA5
TSR3
GNPTG
LOC101928764
RECQL4
LRRC14
TCP11L1
TRIP13
BRD9
ATXN1L
PRKCA
FAM227B
DTWD1
METTL2B
DECR1
RNF40
CCDC189
TNPO1
PGBD5
KIF14
GTF2H3
EIF2B1
CCT5
ATPSCKMT
USP30
TRMT61A
RABL2B
SERINC3
TCTN2
HM13
GPR89B
CSDE1
C7orf50
DMXL2
PRDX6
CEP128
SLC22A15
BICDL1
TBC1D13
GABPB1
HELZ
MCM7
AP4M1
NEURL2
CTSA
CENPBD1
CDKL1
DLST
NAGPA
CKS2
PRPF19
CHD1
DYNC2I1
SEC22A
TMEM39A
HYOU1
NTNG1
BIRC5
NUDT1
MRM2
PPP1R16A
REXO4
RBSN
PREX1
H3-3B
CLTC
SARS1
JAGN1
TFF1
POLR2J3
RAE1
DENND2C
NDUFV1
FBXW8
KLHL32
NDUFAF4
SLC35B1
INTS1
LTV1
RABIF
ECT2
RHEBL1
CNOT2
RRP12
BLM
EDC3
C8orf33
CPEB4
PRPF18
GGH
AOPEP
CYB561
PRKAR1A
MRPL4
STRIP1
OXR1
RMND5B
ZDHHC23
RHNO1
FOXM1
BRD3OS
MYL12B
MYO5A
CACNG4
PTPN1
APH1A
TMEM231
PUS7
LRFN4
LEO1
GNA13
DHX37
SPATA2
MFN1
BCAS2
ADIPOR1
FAM210B
PWP2
LOC102724159
MOCS3
DPM1
BUB1
SLF2
RNF114
TRIAP1
DSTYK
CCDC88A
PIP4K2C
PRC1
ZER1
DYNLL2
CYP24A1
WASHC2C
NAA25
HAUS7
SEL1L
SLC35C2
SWI5
GOLGA2
CDT1
NUP160
C1QBP
TEX2
GMPS
EXO1
CCDC86
TSEN54
CASKIN2
SPTLC1
SKIV2L
NELFE
LARP4
PSRC1
TCTEX1D2
STXBP3
ABTB1
HCFC2
GLT8D2
QTRT2
CCDC191
GPR146
KCND3
MMUT
CENPQ
SPPL2A
E2F7
CA2
ATL2
CCNG2
DUS2
DDX28
CDC25B
ING4
FBXO33
SLC27A2
DLGAP5
SPC25
ZMAT3
KAT2B
TADA2B
CCDC96
ANKRD46
MAPK6
HABP4
FKBP4
GTSE1
SLC52A2
FBXL6
MXD4
CHFR
WIPI2
SPG7
KIF6
ARMC2
ERN1
RHEB
SNX16
DNAJC25-GNG10
DNAJC25
PDCD2
XPO4
SUSD6
MACROD2
IPO11
TACO1
RAB5B
SF3B2
TBC1D23
SPOP
PMEL
CDK2
TADA1
PTBP3
SIRT7
NEK2
NUP107
GCDH
WFDC3
DNTTIP1
URM1
SORT1
GKAP1
CCNB1
RPP40
RXYLT1
RTKN2
MAX
PCNX3
PDIA5
SLC25A13
KAT7
CEP112
IPO4
SMIM5
GPR89A
UBE2G2
PLEKHM1
VRK1
DIAPH3
FAM207A
VSIG10
KIFC1
SFSWAP
METTL2A
ATG7
AMZ2
LOC100289561
DNM1L
MFSD14C
XRCC2
RAD54B
RSPH1
GTPBP10
DHODH
EIF1AD
BANF1
POLL
DPCD
TMEM18
TRPM7
EMSY
WWP1
PUS1
PDSS1
VCPKMT
EXOC6
CDCA4
MTFR2
POC5
TTLL4
C20orf27
KANSL2
PPP2R5C
AJUBA
LMBR1
IQSEC1
RECQL
GOLT1B
CRELD1
TAX1BP1
WDR25
WARS1
SEC62
DGKE
C17orf67
KLHL18
KIF9
TDRKH
HSPA5
LRRC59
TXNL4A
RBFA
G2E3
ERCC3
DDX23
PIK3R4
NFATC3
VAC14
TCF19
CCHCR1
USP8
C7orf26
HECTD4
FBXO28
RRM2
SGO2
CENPW
RTF2
PCNP
LLGL2
KIF18B
UTP23
CLCC1
FRAT1
PSMD4
EDC4
USP10
NPHP3
OTULIN
VAMP3
TPR
ODR4
SLC46A1
CDK1
PBK
UBE3B
KCTD10
ENTPD5
BBOF1
TSN
FBXL3
ANKRD28
NDE1
MARF1
PPM1F
SH3BP5
NFATC2
NOM1
HEATR1
ATP5F1E
ZHX1-C8orf76
ZHX1
TMEM120B
USP35
KCTD21
LOC112694756
SURF2
SURF1
PCBP2
NIT2
SIK1B
SIK1
DMWD
ASPM
AP5Z1
LSS
GLE1
MDM1
TCOF1
MRPS25
SENP5
SPACA9
AK8
TRIM45
FOXJ1
XPR1
CAPZA2
ZC3H14
SHCBP1
PCOTH
MIPEP
TOP1
FANCC
ZNF212
ARL8B
E2F4
EXOC5
AP5M1
BRPF1
SRPK2
PDZK1
RBM48
PEX1
DDX19A
CHUK
FCF1
AREL1
MXD1
PLCG1
NDUFV3
USP36
FBXO25
ITGB5
SLC25A26
C12orf45
GTPBP4
TCP11L2
MDM4
ZNF706
SAV1
MYL5
ATP5ME
NOL8
CENPP
AEN
CFDP1
KPNA1
E2F8
GTF3C5
SFXN2
ARL3
ZNF622
MKRN2
COX19
TENT5C
IKZF5
ACADSB
SLC35D2
SLC48A1
RAD18
TWNK
MRPL43
PDXDC1
IDH3A
NOMO2
WDR47
GCSH
STX4
MRPL45
COMMD5
DDX11
STX16
CLPTM1L
CYB5B
SLC15A4
PUM2
USF3
NUF2
UFD1
CDC45
ZGRF1
LARP7
ZFAND2A
VPS13B
TAF3
TADA3
ARPC4-TTLL3
ARPC4
MED23
SCRN3
CIR1
RNASEH2C
RNF31
PSME2
CCND3
SPRYD3
PMPCA
ENTR1
RNF19B
ADAMTSL4
MARCHF11
SNRPE
METTL3
ATP5MG
NME2
UMPS
AKAP10
AP3B2
LRPPRC
METTL6
EAF1
USP54
SPTAN1
GGCX
CSTB
GCH1
SLC37A3
MCM10
NAGK
TAF5
PDIA4
FBXO43
MYG1
RAB21
ATP6V0A2
CHD6
C2orf50
SERPINB6
FBP1
SMYD5
SMC2
DYNC1I2
SART1
RIDA
POP1
WDR70
YIPF4
MRPL21
IGHMBP2
PRKAR1B
IFT22
VAV2
TTK
GTF3C4
DDX31
ODF2
EEF1E1
MTMR14
TAF4B
PUF60
SLC35A5
ATG3
NOP9
DHRS1
WDR19
LETMD1
H1-10
GRWD1
NAA35
PSMB4
CALM1
TMEM251
MOAP1
MARCHF6
USP42
PCYOX1L
TSPAN9
MYBL2
SH3BGR
LCA5L
ROPN1L
LIN9
SLC25A40
DBF4
MRPS14
ARCN1
UBR5
XPOT
NEPRO
KIF2A
CCDC186
ANKRD13A
FBH1
ANKRD16
ZDHHC7
PRRT4
NME1
CCDC146
COG7
C6orf89
TAMM41
GPAM
NGDN
TMEM41A
LSM14B
SYF2
C8orf76
LRRC37A3
VGLL4
PIP4P1
MTHFD2
STK3
PNN
ABHD4
SLC2A6
MED20
BYSL
STAT1
TTLL5
ERG28
PPP2R5B
HAUS5
MAP3K3
TMEM127
CIAO1
ZNF451
VIPAS39
AHSA1
TULP3
UBA2
VPS4A
CIZ1
SLCO4A1
B4GALT4
ZBTB38
ZNF778
ANAPC7
PRMT2
CDIPT
PRKAB1
MACROD1
RSL1D1
RFWD3
RMDN3
PDF
TXLNG
LUC7L3
OVOL1
SDAD1
CENPN
WDR43
SSNA1
ANAPC2
PSMD12
MYL12A
NDUFB3
FAM126B
GOLGB1
VPS72
OSGIN2
SEMA4B
SMARCA4
CHPT1
NPRL3
CDK7
ASF1B
NDUFS3
KBTBD4
DCTPP1
HACL1
BTD
MMS22L
TOP3B
CAPN7
AUH
ASCC2
SUB1
NR4A2
GPR107
PRKAA1
KCTD3
UNC119B
PSME1
MATN2
ZNF688
EIF3C
EIF3CL
UBFD1
EARS2
HEATR5B
GPATCH11
POLR3F
DZANK1
DPY19L4
ARFGAP1
IFT88
SAC3D1
FAM161B
COQ6
YIPF3
POLR1C
RFX1
KIF3A
TRIM25
PIKFYVE
KLC1
ARHGEF5
DRAM2
CEPT1
HACD1
EDF1
EEF1AKMT1
BROX
AIDA
KIAA0040
VPS50
HEPACAM2
VTA1
NMBR
TOMM22
PSMB7
SYS1
NUDCD1
TPD52L2
C18orf21
NAA20
EAPP
HIF1A
TMEM33
LNPK
FBXL12
TERF2
APPL2
PPP1R12A
RBM17
NUP210
UBTD2
MPP5
ERBB3
FAM102A
BUB1B
GOLGA3
CCNB1IP1
RPLP0
HERC4
TP53RK
FH
DCAF15
ESD
MAP3K20
PODNL1
RGS16
TMEM141
CD99
SCFD2
ACOX3
WIPI1
LTN1
TBC1D15
SEC13
TRMT44
CGGBP1
RBM8A
B3GNTL1
KRR1
SNRPC
PAM16
ZNF654
CCZ1B
NUDT8
AMIGO1
COX6C
ERGIC1
PLS1
TOR2A
CERS5
SYNE2
RBBP8NL
LRP12
ADA
SLX1B
SLX1A
BOLA2B
BOLA2
URB1
ACTR6
FBXW9
TDRD7
LMAN2
KCTD9
CDCA2
MSH3
DHFR
MVK
INTS8
PWWP2A
NOL12
MLKL
ZC3HAV1
SCAI
MVD
USP6NL
UNC79
BTBD7
MEF2D
AXDND1
TIMM23
OXNAD1
DPH3
SQLE
C11orf49
PSMD9
HPD
MON2
GOSR2
GALK1
DRG2
EMC8
COX4I1
MAPKAPK5
TOLLIP
PPM1H
TRIM23
TRAPPC13
SHLD3
NUMB
SBNO1
ZNF860