ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4313223 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◣ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
XKR7
SUMF1
UTP20
HTR5A
VPS50
HEPACAM2
VPS33A
TPH2
WASHC2A
COMMD9
SCFD2
INSM2
SSBP1
FANCD2
TRMO
TNC
FAF1
SVOP
IQSEC3
NUP107
CDK5RAP1
STX16
WASHC2C
SLC39A3
G6PC3
HEXA
CRBN
METTL1
EEF1AKMT3
QTRT1
NDUFAF5
ESF1
TBC1D19
KCNB1
CCNG2
NAGPA
DHX37
SF3A3
RBM19
NME1
C12orf66
RPS7
VTA1
NMBR
UTP25
RTF2
C1QTNF1
CRNKL1
CFAP61
COMMD4
SPNS1
MTF2
PLEKHM3
PCOTH
MIPEP
RAD18
NEURL2
CTSA
PEX3
ADAT2
ITGB3BP
EFCAB7
TTC26
POLR2J3
ZCCHC4
CCDC146
LSG1
NUF2
ACVR1
WASHC5
NSMCE2
MRPL44
RRP15
GPATCH3
TACO1
VPS11
PDE4DIP
MPHOSPH10
MCEE
CWC25
ATG14
COMMD2
MOCS3
DPM1
HAGH
FAHD1
TSFM
SUPT7L
SLC4A1AP
EBNA1BP2
CFAP57
SLC24A1
TRMT1
HMGB1
USPL1
SULF1
FCF1
AREL1
CCAR2
TMEM242
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GFM2
CPLX2
RRS1
AP5Z1
BRF2
RBM48
PEX1
TOM1L2
DRC3
RBM28
WDR11
NMNAT1
LZIC
IDH3B
NUDCD3
NPEPL1
TEFM
LLPH
USP30
ALK
MPRIP
STX18
COPS7B
THOC1
PUM3
CHMP1B
NAPA
DMAP1
MRPS18C
HELQ
AAR2
ACTR6
SEC13
RRP12
INTS12
GSTCD
TRIP4
NBPF1
TMEM199
POLDIP2
CBWD5
GTF3C3
CFAP299
TAF13
KYAT1
NDC80
METTL4
TFIP11
FBXL13
ARMC10
IPO4
KAT2B
ATR
PEX12
PSMB7
MRPL30
MITD1
OPA1
POLR3F
DZANK1
GDAP1
FHL2
WDR36
PCNA
HECTD3
GALK2
COPS2
SMIM12
SEC22B
CTNNBL1
PVALEF
AATK
TPX2
DCAF10
PDZRN3
TMEM186
PMM2
TRMT6
MCM8
PLEKHD1
STMN3
MTIF2
MFSD1
SYF2
HRCT1
KCTD5
PIH1D2
NKAPD1
SPRYD4
EXOSC5
BCKDHA
SNRPB2
GPATCH4
NOXO1
PBK
PSMB2
DNAJC25-GNG10
DNAJC25
SLC33A1
MTMR9
CBWD3
CBWD6
TOR1A
MSS51
PRPF6
DNTTIP2
AQR
GSX1
TOP3B
PTPRD
DRG2
DBR1
DNAJC24
DCDC1
PIGK
ZNHIT6
RAB37
RPS27L
MRPS15
POMZP3
SCNM1
LYSMD1
DDX18
SLC36A1
TUT1
NCOA1
TSEN2
TBC1D15
TMEM222
FAM240C
TARS2
RBL1
COX16
ZNF721
PIGG
UBE4A
BCAS3
C2orf49
WFDC3
DNTTIP1
UQCC1
C3orf14
NDUFS3
KBTBD4
LTV1
DNAJC2
METTL9
MTERF1
GTF2B
LAMTOR3
PSMF1
YARS1
S100PBP
LOC101928764
MRPS23
CCDC86
FXN
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SMG8
SDAD1
BLOC1S1
ALKBH3
SLC25A26
ZNF668
ZSCAN30
HIPK1
MRPS31
USP2
INTS7
DTL
ZC3HC1
SELENOH
CDK11B
CDK11A
PNPT1
SCP2
GRWD1
PACRGL
FKBP1A
CGGBP1
C3orf38
LAMP1
KRR1
TOP3A
SMCR8
BET1
MARCHF4
HSPH1
C12orf73
TRIM62
BOD1L1
CELSR3
ATG7
METAP1D
ZSCAN25
MTFR2
FBXL20
VGF
WBP1L
CLUAP1
DPH5
OGT
FARSB
NUP54
MRPL39
ABLIM1
MOK
SNAP25
AASDH
ZBTB17
ARHGEF1
C16orf91
WDR24
C5orf51
TIMM10
TMEM101
MCM6
RAB5IF
ARL14EP
SCN3B
RTTN
UBE2F
GTF2H2C
GTF2H2C_2
COPS8
RASGRP3
PSMB1
TBP
KDM1A
TAMM41
ZNF200
NUP214
OS9
MAGOH
MAP3K7CL
UBOX5
FASTKD5
FAM133B
PPP6R1
OGDH
RPL27
CBX5
GATB
SNRPD1
MMUT
CENPQ
METTL2B
STX12
FAM200A
CFLAR
STAT3
POLR2M
MYL12B
GRN
ZNF17
IFT46
HSPB7
NGDN
MC2R
CDK7
MTOR
PIGL
REXO4
ATP6V1H
CEP162
TBL3
TADA2B
CCDC96
NFIB
PRPF18
OXNAD1
DPH3
THAP10
LRRC49
RNF6
MTERF4
TATDN3
NSL1
UBA52
EIF2S1
ATP6V1D
HPCA
STK4
GTF2H3
EIF2B1
ERMARD
VPS25
SUGCT
MPLKIP
DNAJC16
FRA10AC1
AURKAIP1
FAM228B
SF3B6
FBXO32
ATP6V0D1
GFM1
LRRC29
TMEM181
CLN3
NAPG
TRMT5
SLC38A6
RPL26L1
POLR3D
DGUOK
INO80B
TVP23B
VAC14
ZSWIM3
ACOT8
POLR2J
POLR2K
SCAND1
NRAS
RPF1
TRAPPC6A
BLOC1S3
MED18
HMGCL
SAP30BP
RECQL5
HSPBP1
COMMD1
MTBP
MRPL13
NSUN4
CDC6
UBN2
PHB
MRPS33
TMEM230
PNO1
TOMM5
PMS2
AIMP2
INO80C
SMIM5
RNMT
FAM210A
TOMM22
SECISBP2
NFE2L2
TTLL9
ATG16L1
TTI1
RPRD1B
PLAAT5
SASS6
LRRC59
ATG4C
ZNF335
MED23
RBSN
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
ADAMTS17
UTP15
ANKRA2
VPS72
EXOSC9
GLRA1
FAM227B
DTWD1
KLHL12
PTCD3
POLR1A
POMP
VPS45
GPN1
CCDC121
SH2D3C
THUMPD3
OSTC
RTKN
YJU2
ZNF185
UNC80
OAZ3
ZNF212
SAMD4B
SGO2
TBC1D30
GNS
SHQ1
IQCH
AAGAB
PUS1
NBAS
CCNC
ZMAT2
KDSR
ZNF461
NDUFS7
ANKRD40
NKAP
FREM1
DDX1
VPS4B
MCM7
AP4M1
ATP5F1E
U2SURP
ELAC2
ZNF331
GNL2
NECAP2
RCAN1
TWNK
MRPL43
KNOP1
ALG1
DMAC2
MNAT1
TCF4
TTC8
ATAD5
SLC1A5
ANAPC5
DHDDS
SNIP1
SYTL3
PSMD3
DCLRE1B
AP4B1
HSPA9
NIFK
CCDC28A
ZBTB40
CSTF1
AURKA
PTPN1
PRPF38A
ORC1
YPEL5
RYR1
TFPT
PRPF31
TTLL11
THADA
MRTO4
EMC1
GRIA2
SSX2IP
AGFG2
EXOSC3
SLIRP
ALKBH1
C12orf43
EDEM2
ZNF609
SFSWAP
MRPL3
SLC25A32
DCAF13
PINX1
SUPT4H1
PAFAH2
NET1
CFAP69
RPUSD4
FAM118B
KTI12
HELB
ZBTB45
C17orf75
RBBP5
MARCHF8
ZSCAN22
TRUB2
COQ4
GPAM
COASY
UNG
OSBPL9
EIF3H
MAF
C11orf52
C20orf141
ATP6V1C1
DPH1
POLD3
ZMPSTE24
GBA
ZNF383
CCT2
ACOX3
HEATR1
NSUN5
SF3B5
SLC25A51
NCOA5
COX7A2
GTPBP10
NR1H2
PSD
FBXL15
MARS2
LTN1
FLAD1
GTF2H2
EIF3F
KCNMA1
ZNF830
CCT6B
BNIP3L
FAM183A
TRMT44
RPL32
KIF2C
RTEL1
TOX4
RAB2B
ARMC8
GARS1
RRN3
MYO18A
DDX49
COPE
COG7
MTHFR
CLCN6
RABL2B
STK36
RNF25
ALG10
ATP5MPL
PFDN4
TRMT61B
BIN3
EIF3K
MAP4K1
KLHL20
MANBAL
MTMR14
TIMM23B
PARG
SSR3
CXorf56
MRPS34
EME2
SEMA3D
NME3
UBXN11
NLE1
DSTYK
SLC35A5
ATG3
TTC4
ATAD3A
ELP3
HBS1L
ZKSCAN1
HARS2
HARS1
UTP14A
TFB2M
CNST
SUPT6H
SDF2
NCSTN
COPA
C1QA
GNG11
PSMD6
ERLIN2
OPRD1
SLC31A1
FKBP15
MEF2C
WIPI1
KIF23
ERAL1
CHGB
IPO11
CFAP410
KIF3B
DISP1
DCP1A
SPTLC1
VPS41
NDUFV2
ZGRF1
LARP7
NGLY1
OXSM
ZDHHC6
VTI1A
NXT2
PPIP5K2
VGLL3
ZGPAT
ARFRP1
POLQ
SLF1
KIAA0825
FBXO48
APLF
BNIP1
NOL10
SLC39A6
ELP2
FBXW2
RANBP2
PHF5A
ACO2
ITPA
SDHD
PSMA5
PBRM1
GNL3
NDUFA5
PCBP2
ZNF555
FAM98B
RPTOR
SMIM26
RAD54L
TIMELESS
FAM207A
SEC14L1
SMARCD2
ERI1
ERLEC1
ASB3
SULF2
SSTR5
MED27
CCDC30
TTC27
SIKE1
BRIX1
CYB5R4
MXD1
CWF19L1
M6PR
KLRG1
TM9SF4
SLC35E2A
STRA6
RECQL
GOLT1B
INSIG1
VAMP5
VPS13B
ARL6IP5
PPP1R8
KBTBD8
AARSD1
RPS8
SERP1
EIF2A
CDC42EP3
CHRNG
DYRK1B
METTL2A
MTMR6
ANAPC7
POLR1H
RAD51AP1
C12orf4
MDH1B
FASTKD2
AXDND1
LRRC37A3
MAGOHB
IQGAP3
MRPL12
MAIP1
TMEM41A
SYNJ1
WDR31
C18orf21
MRPL15
CDC20B
LURAP1L
HHIPL2
RABL2A
NUP35
GNAI3
PALB2
DCTN5
POLR3B
RRP8
ILK
KRIT1
ANKIB1
TMCO1
DARS1
EIF3D
FLRT3
MRPL16
ARHGAP28
ESCO2
RNF115
POLR3C
RAB18
SNRNP200
CLP1
NCAM1
THOC3
TRMT10C
POC5
UBE3B
KCTD10
POLR1F
PRPF3
UBXN1
OTUD7B
CHMP2B
EDC3
GTF3C5
STAU1
DDX27
ATF6
SRSF11
LRRC40
RFC3
MDN1
HIF1AN
FNTA
ZFYVE1
MAK16
EIF2D
UTP23
LONP2
ABCC11
FOSB
ZCCHC3
ZNF217
CDK4
PDAP1
BUD31
KIAA0895
ANLN
RNASEH1
HBP1
SCRN3
CIR1
ZBTB18
RPIA
CDC7
RBM45
C2orf42
BORCS7
PIK3R4
LMAN2
PHB2
TP53RK
PEMT
HUS1
RFC1
EIF6
SLC25A53
WDR77
ATP5PB
RPF2
PDCD11
ATP5MD
METTL6
EAF1
LRRC46
ST7
CATSPERG
NSG2
JAKMIP2
POLL
DPCD
MDM2
KAT5
PER2
TYW3
CRYZ
NEXN
EIF1AD
BANF1
MTLN
RPL5
ELOVL1
CUEDC2
KRT80
NOL6
FAM185A
SLF2
ZER1
KANSL1
MDM1
LSM8
RPS20
NFKB2
KANSL3
RPL11
EPHA3
HES3
NCBP2AS2
NCBP2
DNAJC11
TMX1
TMEM241
RANBP6
SLC9A1
GAMT
WDR74
CCDC200
HACL1
BTD
OSBPL7
DBT
TSPAN33
DBF4B
DYNC2LI1
COPS4
WDR70
MFAP3
FAM114A2
PPRC1
TBRG4
GOLGA5
MRM3
GLOD4
SETDB1
BSDC1
DDX56
HIBADH
BTK
RPL36A-HNRNPH2
RPL36A
MYBPC2
STIL
SPATA2
TMEM209
NOC2L
ZNF165
RMND1
ARMT1
IARS1
MED30
TPRKB
TTC16
PTRH1
ROMO1
ZNF717
NOTCH2
NOLC1
ALKBH8
ATP6V1E1
OSER1
FAM204A
ZNF268
DNAH7
RMC1
TUBD1
RPS6KB1
PARL
ZNF3
TTC30B
NHLH2
FBXW8
RIOK3
AARS2
VPS33B
PSMB6
ZNF473
VRK3
CNOT2
ATAD3B
RBM42
EXOC1
CDC23
SLC35A3
PAXBP1
PRR5
PRR5-ARHGAP8
ALLC
MRPL27
EME1
METTL25
CCDC59
NUP155
TOM1
MRPL17
WDR7
STON2
RAE1
SEM1
LIMCH1
LAP3
TMBIM4
SLC44A1
BIRC5
PIGU