ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089500 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◣ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
TRIM37
PSMD6
TEX14
RAD51C
NPAS4
SLC12A9
HEATR6
BRIP1
USP32
TUBD1
RPS6KB1
PFDN4
FAM72C
FAM72D
HTR5A
FAM72A
ARFGEF2
IQGAP3
UBE2C
C12orf66
NUDT1
MRM2
NCAPH
NOL8
CENPP
FAM72B
SCRT1
SGO1
PDE4DIP
HSF1
BOP1
NUF2
FANCI
RNFT1
UNG
FANCD2
TROAP
RFC3
BCAS4
KIF14
RRP15
TRIP13
BRD9
DLGAP5
DZIP3
CIP2A
METTL1
EEF1AKMT3
SKA3
MRPL57
RNF166
CTU2
DYNLRB2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF217
DHX40
TTC27
APPBP2
HSDL1
DNAAF1
PPM1D
ZNF331
MTFR2
VRK1
IQSEC3
ZFPL1
CDCA5
RAB22A
KPNA2
SIKE1
C3orf14
TRMT61A
POLQ
BLM
C16orf46
NTAQ1
EDC3
MCM10
SMC2
NET1
CCNA2
CCT2
MOK
TICRR
NEMP1
NRAS
NEIL3
CPLX2
DCLRE1B
AP4B1
PPAN-P2RY11
PPAN
CYB561
BIRC5
WASHC5
NSMCE2
RAD54B
METTL3
CYB561D1
SGO2
CSTF1
AURKA
SKA2
PRR11
EIF2D
SMYD5
BARHL1
HIPK1
LIX1L
GRWD1
TSR3
GNPTG
RRM2
TOP1MT
NDUFAF6
CCNE2
UTP20
INKA2
DDX20
SUMF1
VARS1
MAD2L1
TTK
BUB1B
CCNB1
FBXO32
OAZ3
ASPM
ZAR1L
BRCA2
C12orf45
PGBD5
TONSL
IPO4
ATXN7
RAD18
SPTLC1
FBXO5
TTF2
C16orf71
ANKS3
HMGB1
XRCC2
SMIM5
SECISBP2
RTF2
TOP1
RRP1
KCNH6
KIF20A
BRD8
PARD6B
STOML1
L1CAM
DSCC1
WDR4
LTV1
SAP30BP
RECQL5
SMG8
SPC25
FDX2
RECQL4
LRRC14
PKMYT1
QSOX2
LOC101928764
ASF1B
HCFC2
GLT8D2
TBX2
TCF19
CCHCR1
TRMT61B
CDK5RAP2
KLHDC4
PPM1E
NCOA3
TEDC1
CDC14B
INTS2
EIF3C
EIF3CL
SHC1
CKS1B
AP3B2
PABPC1
CKAP2L
PRCP
DDIAS
ACOX3
METTL2A
PPP1R16A
MCRS1
RSPH1
AP4E1
NOTCH2
SHCBP1
KIFC1
CDC20
TMEM186
PMM2
BUB1
MRPS23
NHP2
TEDC2
KCTD13
DUS2
DDX28
EXO1
BMP7
NAGPA
RUVBL1
CEP55
RBM19
ZC3H3
MIS18A
MOCS3
DPM1
RPP40
ATXN1L
CDIPT
MSH3
DHFR
NEK11
ASTE1
SCFD2
THOC7
RTKN2
TTLL4
PREX1
ATAD2
BCAS1
NUDT4B
NUDT4
SERINC3
SNAP25
NUP107
NUDT2
KIF24
PHTF1
GGH
BICDL1
SNRPE
RCCD1
POLR2J3
CDC25A
CREBRF
DHODH
ATP6V1C1
NUDT15
SQLE
FBXW8
TADA3
ARPC4-TTLL3
ARPC4
GTPBP10
FAM207A
XKR7
PLK1
POLR2J
TRIM33
MYBL2
KNOP1
KLF10
TSEN2
AEN
TEX10
CEP128
RAD54L
DYNC2I1
DHX37
SLX1B
SLX1A
BOLA2B
BOLA2
WASHC2A
PTPN1
NOP16
HIGD2A
MRPS21
CENPW
GTPBP4
MKI67
RABL2B
SLC35B1
CHUK
TPRA1
NOL11
DPH7
SF3B4
RNF40
CCDC189
NUB1
WDHD1
SOCS4
POC5
KLHL36
VPS33A
ZFYVE1
ESPL1
ATP1A1
NAA35
PRELID3B
METTL6
EAF1
DMXL2
ZNF688
ZBTB9
RACGAP1
RHEBL1
ZHX3
MRPL27
EME1
PES1
AOPEP
TOPBP1
TF
MND1
MAPK8IP2
MRPL3
BOLA2-SMG1P6
GTF2H3
EIF2B1
NOM1
HEATR1
PRKAR1A
URB1
PPP1R12B
FANCC
RPUSD1
CHTF18
PRMT6
UTP4
DERPC
CHTF8
RAD51
TAF13
NBPF15
PLCG1
PIGU
ZNF778
POFUT2
RMDN1
CPNE3
WASHC2C
PLK4
TSFM
VAC14
EEF1E1
CDK5RAP3
OS9
CIT
YPEL2
IFT22
VPS50
HEPACAM2
CCDC150
AGFG2
NME1
ANAPC7
PNPT1
LRPPRC
DENND2C
APH1A
CCDC86
DNAJC25-GNG10
DNAJC25
QTRT1
NDUFS3
KBTBD4
LRWD1
ALKBH4
ZSCAN2
RHBDD2
LRFN4
GDI2
NEURL2
CTSA
RXYLT1
RCE1
PSRC1
ITGB4
ATG101
BICD2
COMMD4
NDUFV1
MED20
BYSL
FIS1
PTRHD1
CENPO
ADCK1
BCAS2
SLC45A3
IDH3A
MPHOSPH6
GNAI3
CRYL1
GTSE1
TAMM41
TCOF1
GPATCH4
TWNK
MRPL43
POLR1B
PARPBP
NUP37
DNAJA3
PXMP2
POLE
PWP2
LOC102724159
TAF3
KIAA0895
RABL2A
ANLN
PDXDC1
ZNF888
TTLL11
CLCC1
CDT1
SLC52A2
NOL10
FBXL6
COG7
DUSP12
RBBP8NL
PMS2
AIMP2
INIP
RUNDC3B
SGTB
NLN
MTMR14
KATNIP
GTF3C1
CSRNP2
HEATR5A
METAP1D
FBXW9
PRMT2
TMEM203
NDOR1
CCNB1IP1
CYC1
CDK1
DOP1A
GFPT1
RNF115
POLR3C
CHFR
RMND5B
TRIAP1
ABCA5
MCM7
AP4M1
PPIL1
SYT5
RAE1
ARFGAP1
TMEM258
FEN1
MDM4
SUV39H1
PWP1
IARS1
ZHX1-C8orf76
ZHX1
HASPIN
TATDN1
NDUFB9
POLR3F
DZANK1
CKS2
DYRK1B
PUS1
ZFAND2A
CLCN7
CRBN
NOMO3
UBL7
NIP7
COG8
TAF1C
GPSM2
ZNF771
LRRC29
STX16
DUS4L-BCAP29
DUS4L
COG5
NBPF11
GOLGA5
DDX11
TECPR1
DDX49
COPE
TMED5
CCDC18
TRUB2
COQ4
H3C15
H3C14
RELA
CUL7
UTP23
ZNF367
INTS1
BLOC1S1
MDM1
DERL1
NIPSNAP3A
WDR59
NOL6
KLHL12
RIPK2
ALG8
CNPY2
SPNS1
C8orf33
RABIF
MACROD1
MYG1
NBPF1
TACO1
CCT5
ATPSCKMT
DNAL1
TBC1D30
GNS
FAM214A
METTL25
CCDC59
LYSMD2
TPTE
SKA1
KIF11
MFSD1
RBSN
ANKRD35
CDK7
NME2
ASNS
CKAP5
COQ2
OSGIN2
ACBD7
ATR
PIF1
MXD4
TIMM9
KIAA0586
CEP112
NEK2
DNAH7
RHNO1
FOXM1
CEP135
GFOD2
ANKRD46
CNTRL
MTHFD1L
C5
MCOLN1
NARS2
ATP5F1E
SPPL2A
PRPF3
EBNA1BP2
CFAP57
CENPE
NUFIP1
GPALPP1
C20orf27
CHRNB2
PIAS3
IPO11
HAUS7
TAF4B
OXR1
RNASEH2A
CCNG2
SLC25A19
SMC6
GEN1
CEP72
CRELD1
AAAS
WDR62
THAP8
FAM200B
NOC4L
DDX51
TRMT5
SLC38A6
MMS22L
MBTD1
UTP18
AP5Z1
CENPA
MRPS14
TCHP
ZNF706
WDR43
RMI2
CFAP69
RABEPK
CLPTM1L
SLC35E3
HAT1
SCRN3
CIR1
PSMC5
FTSJ3
ZC3H8
TRMT1
RNASEH1
NEK10
SPATA33
ZNF622
SLF2
TCTN2
ATG7
RSRC1
ZDHHC24
ACTN3
NPM1
YIF1A
CLTC
CHD1L
PRKAB2
EXOSC5
BCKDHA
NAGK
ANGEL1
PRPF19
POLE3
C9orf43
NAA25
RAD9A
ZC3HC1
INPP5K
ADAR
ZNF34
WIPI2
ZFP41
GSN
RAB14
PRKAB1
ATIC
MYBL1
SKIV2L
NELFE
USP14
ECT2
FRAT1
ZNF212
FBXO43
PSMB4
SURF2
SURF1
RPRD1A
WIPI1
GFM1
WDR61
PYCR3
YEATS4
DYNC1I2
HJURP
MFSD5
VTI1B
RITA1
DDX54
CEP41
KIF18B
CENPN
NGDN
SAXO2
EFL1
PMPCB
KIAA1586
ESCO2
KIF2C
ARMC2
MMUT
CENPQ
NOP9
DHRS1
LSM8
AMZ2
SZT2
MED8
CNIH1
C1orf109
CDCA8
CENPH
PIP4P2
FBXW2
CALCOCO2
HRH3
RNF114
METTL18
C1orf112
ACTR6
CCDC146
RRP1B
HSF2BP
TUFT1
XPOT
SPDL1
SLC22A15
KLHL18
KIF9
THAP5
DNAJB9
YIPF4
PNO1
SCNM1
LYSMD1
RSL1D1
LOC112694756
CLBA1
ZNF805
MYO5C
CORO1B
SRPRB
ECSIT
NOMO1
GPR89B
BZW2
ANKMY2
NBN
MIGA2
CCND3
GLMP
UTP25
POLL
DPCD
EXOC5
AP5M1
ZNF641
THEM4
MYL12B
REXO4
SYS1
SPEF2
TBL3
PPIL4
P2RY2
OTUB1
PDZD11
KIF4A
CS
GEMIN5
TMEM250
RBM28
CFDP1
ZNF408
ARHGAP1
STRIP1
SLC35C2
EID2B
NEDD4
ATG14
GTF3C4
DDX31
SUPT4H1
GABARAPL2
RPLP0
FAM227B
DTWD1
SNRPD1
HMGB2
SPOP
EEF2K
GFUS
TMEM167B
CDK20
NTSR2
VPS45
VCPKMT
THAP10
LRRC49
ZSCAN25
SPG7
MAD1L1
MAPK8IP1
LTN1
DPY19L4
SARS1
E2F8
HPS3
WDR25
WARS1
SMPD4
MZT2B
UNKL
LTO1
POLR2K
MELK
CIART
TMEM150A
GABPB1
DNAJC30
BUD23
MAPK8IP3
CARHSP1
NFKBIE
XRN2
MARS1
ARHGAP9
ANAPC1
RFWD3
CDK4
SETDB1
FANCA
SLC25A26
ZNF696
ZC3H18
CEP162
CMSS1
ALAD
PDPR
SWI5
GOLGA2
RRP12
WDR74
UFD1
CDC45
KLHL24
LSS
GLE1
FPGS
TARS2
CKMT1A
ATF2
G2E3
ODF2
SHQ1
PUM3
DUT
SEC22A
GINS2
OVOL1
DNA2
TRAIP
DEPDC1B
HEATR5B
GPATCH11
PRC1
KNTC1
SMAGP
FBP1
TASOR2
GAR1
HSPBP1
GTF3C5
KXD1
ATG5
GALK1
DNAAF2
GOLPH3L
TMCO6
TC2N
AURKB
DDX21
PDSS1
RRP9
PARP3
PPIB
PRPF4
CDC26
IDUA
WDR46
PFDN6
TRMT6
MCM8
SH3BGR
LCA5L
CREB3L2
TBC1D31
PDIA4
IDI1
ZNF273
WDR37
PSMD4
CYBA
LLPH
EIF3E
POLG2
TMEM170A
DNAJB2
HSPA9
SFSWAP
SDAD1
ATAD5
ZMAT3
BOD1
RIOK1
CAGE1
AP1M1
SPACA9
AK8
ISCA1
CSTB
SLC5A6
ATRAID
PLEKHM3
FAM174A
CHCHD6
TBC1D13
YWHAG
CFAP54
PDCD2
PRIM2
NTMT1
MET
CSDE1
BLOC1S2
C8orf76
SELENOS
SPC24
RECQL
GOLT1B
TMEM67
TASP1
PIP4K2C
LAMTOR3
LCMT1
DARS2
CENPL
ZNF789
ZNF497
GSTK1
SLC2A8
ARHGEF35
LIN9
ENTPD5
BBOF1
NOMO2
E2F4
EDC4
EMC2
CCDC200
CENPM
USP30
AKAP1
LIN54
PSEN1
IQGAP1
CORO2A
SEC13
TAF5
ING3
KCTD5
SEZ6L2
ASPHD1
TMEM18
RRM2B
DNAJC2
MON2
OXLD1
CCDC137
STRADA
ZNF529
ARPP19
AXDND1
ZGRF1
LARP7
METTL2B
FCF1
AREL1
RNMT
FAM210A
FANCE
SCRIB
EMC8
COX4I1
ZNF785
GPR78
CRNKL1
CFAP61
RRS1
KIF15
KIAA1143
DIMT1
PEPD
CELF6
ERLEC1
ASB3
SSB
LYRM7
KCNS2
AGBL2
SNAPC4
BRMS1