ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089509 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◣ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
PSMD6
TUBD1
RPS6KB1
HEATR6
TRIM37
IQGAP3
TEX14
RAD51C
PFDN4
DYNLRB2
BRIP1
UNG
NPAS4
APPBP2
USP32
PARD6B
HIPK1
YPEL2
BCAS4
SGO1
PPM1D
FAM72B
XRCC2
ZNF217
FAM72C
FAM72A
SLC12A9
RNFT1
ARFGEF2
C3orf14
KLHDC4
CREBRF
NCOA3
FANCI
ZFPL1
CDCA5
RNF166
CTU2
METTL1
EEF1AKMT3
MOK
SKA3
MRPL57
BIRC5
PPM1E
TICRR
POLQ
FANCD2
BARHL1
DHX37
CYB561D1
TRIP13
BRD9
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TROAP
PHTF1
GABARAPL2
SCRT1
NCAPH
SKA2
PRR11
UTP20
KAT2B
FBXO5
RRP15
CRBN
SLC45A3
SMG8
NOTCH2
TTF2
WASHC5
NSMCE2
RAD54B
DCLRE1B
AP4B1
FAM72D
RAB22A
DZIP3
CIP2A
NUF2
DLGAP5
CSTF1
AURKA
ATXN7
PDE4DIP
DHX40
CPEB4
ZHX3
SIKE1
CCNA2
HSDL1
DNAAF1
CKAP2L
SAP30BP
RECQL5
SUMF1
C16orf46
C12orf66
UBE2C
NUDT4B
NUDT4
ZEB1
DYRK1B
SMC2
INTS1
HTR5A
ZNF331
DOP1A
FAM214A
OAZ3
CCT2
SHCBP1
GPR89A
ROPN1L
HCFC2
GLT8D2
MOCS3
DPM1
CCDC200
MYL12B
TASOR2
NET1
FBXO32
HSF1
BOP1
BICDL1
RRP1
MTMR14
SPAG1
FAM207A
TRMT61A
EIF3C
EIF3CL
GTF2H3
EIF2B1
KLHL24
KIF14
TTLL11
LOC101928764
NBPF15
RUVBL1
DDX11
HELZ
TWNK
MRPL43
ING4
RACGAP1
SPPL2A
NBPF1
NRAS
ESPL1
CS
NEIL3
CEP128
TRIM33
DNAH7
BMP7
PWP2
LOC102724159
KPNA2
NHP2
TMOD3
RAD51
ABCA5
GNAI3
NEMP1
NEURL2
CTSA
SNX16
TBX2
EXO1
ZFYVE1
MCM7
AP4M1
ATG101
QSOX2
SEC22A
MIS18A
LYSMD2
TPTE
AP4E1
IQSEC3
WASHC2A
POLR2J3
RNF114
ATP1A1
PRKAB1
METTL2A
MCM10
KLHL36
TBC1D30
GNS
NDUFV1
PRMT6
SLC27A2
LIX1L
SLC25A24
VARS1
PRKAR1A
CCDC86
ZSCAN2
MRPS23
CENPN
APH1A
RRM2
PLK4
KIFC1
FAM227B
DTWD1
CLPTM1L
VRK1
C20orf27
AZIN1
GNA13
RAE1
THOC7
TSEN2
AP3B2
IPO4
RHNO1
FOXM1
CFAP69
PRELID3B
RRP12
BUB1B
SH3BGR
LCA5L
NUB1
NTAQ1
NAA25
MKI67
MYL12A
RPS6KB2
XKR7
L1CAM
ATP6V1C1
C8orf33
TCTN2
CALCOCO2
CCNB1
CENPBD1
C16orf71
ANKS3
MED20
BYSL
FBXO43
RNF40
CCDC189
TADA3
ARPC4-TTLL3
ARPC4
ERN1
GRWD1
WIPI1
PRPF18
TRPM7
ATXN1L
MTFR2
CHFR
DDX49
COPE
ATG14
GTSE1
RHEBL1
FAM210B
MAX
GTPBP10
MYG1
TTC27
MAPK8IP2
TOLLIP
TXLNG
MYBL2
CCT5
ATPSCKMT
TBC1D13
INCENP
BLM
LTV1
C11orf24
GPSM2
TAF4B
TP53INP1
SLC25A25
NAIF1
SNAPC4
CFDP1
GPR89B
NXF1
SMYD5
DIMT1
NOMO1
MXD4
NME1
NUDT2
KIF24
ZFAND2A
MBTPS1
PCNX3
RAD18
SKA1
SLC52A2
FBXL6
DENND2C
AURKB
TMOD2
PPP1R16A
KLF10
ZNF778
SLC25A19
MED13
CDT1
SCFD2
KIF18B
NDUFAF6
CCNE2
TEX2
LRRC29
GFPT1
ZC3H18
DERL1
CPLX2
NOL6
CYB561
SLC35A5
ATG3
NCKAP5L
MLYCD
XPOT
LATS2
POLR2J
CSDE1
ALAD
PLK1
ZMAT3
DUT
METTL17
TRIM45
WDR4
SRPRB
C6orf89
VANGL1
PREX1
SGO2
TSEN54
CASKIN2
DHODH
GFOD2
TUFT1
IPO11
NUDT1
MRM2
LARP4
PSMD12
TTK
BUB1
CDC14B
PDXDC1
GABPB1
LSG1
RTKN2
LRPPRC
FIS1
DBF4B
ATP5F1E
LTO1
PLEKHM3
ARSG
HEATR5A
SLC16A6
ACOX3
HAUS7
TRMT44
IQCG
LMLN
ASB8
NAGPA
RTF2
P2RY2
SLITRK3
GALK1
PIAS3
PUF60
MON2
TSFM
UTP23
PSRC1
ZNF821
TOP1
KPNA1
KMT5A
SPTAN1
RABL2B
RMDN1
TFPT
PRPF31
CPNE3
OSGIN2
PDP1
ESCO2
STOML1
DEPDC1B
FRAT1
GOLGA3
CALR
GFI1B
TSC1
DSCC1
GCSH
SUV39H1
SLC27A3
TCF19
CCHCR1
DKC1
COTL1
PGBD5
PRCP
DDIAS
USP54
QTRT1
NUP107
SFSWAP
PTPN1
SART1
BCAS2
RIPK2
AACS
ZBTB9
NIPSNAP3A
CCNG2
MRPL11
CLTC
CIT
RNF121
LOC100133315
DYNC2I1
RSPH1
FDX2
REXO4
MFN1
SPEF2
PSMA5
LLGL2
SMAGP
CACNG4
NEK2
COX14
HSPA5
DCTPP1
AP2A1
GTF3C4
DDX31
ANAPC7
TSR3
GNPTG
UFD1
CDC45
MARCHF8
PTTG1IP
WDR74
EDC3
EIF2D
DUS2
DDX28
NR4A2
SLC25A44
MIGA2
MYO5C
HARBI1
ATG13
METTL3
TRIAP1
GLE1
TBC1D31
HAUS5
LRP10
PIGU
DIAPH3
TMEM120B
SPATA33
ANKRD28
CLCN7
FLCN
CCDC146
PYCR3
CKAP5
SLC35A2
DMXL2
CHIC2
ATR
DDX19A
ETFDH
C4orf46
UTP4
DERPC
CHTF8
CSRNP2
EEF1E1
SLF2
SPG7
RABL2A
PDSS1
PRPF19
PRMT3
CCND3
RAB5B
ZNF622
MRPL2
KLC4
GRB2
MYO5A
POC5
USP14
NKIRAS1
SWI5
GOLGA2
COPS3
NR1D2
PLCG1
KLHL20
MFSD14B
SPATA17
GPATCH2
CEP55
SPC25
GCDH
CREB3L2
STRIP1
RFWD3
ZNF148
CBLB
TMEM129
TACC3
LACTB
MRPL28
ATAD2
ARMC2
C12orf45
NOP9
DHRS1
C8orf76
MAPK8IP3
TACO1
WDR3
GDAP2
BBS1
UBE3B
KCTD10
CALM1
EXOSC5
BCKDHA
FBXW8
SRD5A1
NSUN2
MACROD1
SNRPE
PPP1R12B
CNTRL
HPS3
C5
GATAD2B
URB1
MAD2L1
SLC25A26
MRPL27
EME1
TTLL5
ERG28
ARFGAP1
CDK5RAP2
NMD3
FITM2
NTNG1
KLHL18
KIF9
TOP1MT
NEK11
ASTE1
POLL
DPCD
PCYT1A
FAM117B
KCTD13
DICER1
NOC4L
DDX51
RUBCN
EIF3B
WWP1
SERINC3
SQLE
SARS1
LRRC37A3
CORO1C
TRIM25
PRR29
KLC1
RBM19
SSNA1
ANAPC2
IFT88
NOB1
SF3B4
NEK10
SUSD6
TMEM71
PHF20L1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SAXO2
EFL1
RPGR
KATNIP
GTF3C1
ARNT
SYNJ2BP-COX16
SYNJ2BP
ZGRF1
LARP7
MFSD5
WDR59
ZKSCAN8
NOP16
HIGD2A
WDR61
SPEF1
PDCD2L
DOLPP1
CHRNA5
VPS4A
PTGFRN
WASHC2C
WDR46
PFDN6
RXYLT1
TMEM67
RTTN
CLBA1
ERGIC1
NUMB
LSS
TDRKH
SSBP2
RFC1
MRPS14
DYNLL2
NDUFS3
KBTBD4
PIP4K2C
WDR31
FAM117A
VAC14
THOC3
RECQL
GOLT1B
VPS45
CDC25B
CHCHD6
SLC25A46
TRAP1
TMEM38B
INKA2
DDX20
NME2
SAC3D1
ACBD7
PPM1G
KYAT1
PHF1
LRRC8A
FBXW9
ATP6V0D1
TMEM258
FEN1
NGLY1
IFT22
HEATR5B
GPATCH11
MCRS1
MRPS21
CCDC88A
USP8
GMFB
TMEM65
PCOTH
MIPEP
IQGAP1
BANP
MND1
TOX4
RAB2B
UPF2
PPAN-P2RY11
PPAN
WDR62
THAP8
CCDC150
DDX46
TMEM203
NDOR1
INIP
DLST
PRKCA
CARD19
AEN
DEPDC1
SPOP
SETDB1
PITPNB
GSN
PPIL1
CKS2
RAB14
SND1
SLC35C2
E2F4
GSTP1
UCP2
CENPW
SETD4
ANGEL1
LSM14B
C14orf28
ANKS1A
BACE1
TVP23C
PBK
PPRC1
CENPA
FAAP24
CEP89
FANK1
COQ2
GOLGB1
MRPS22
CEP112
RAD54L
VPS33A
GTPBP4
MRPL3
FBXO33
BCKDHB
HNRNPF
TAF6L
DNA2
CDK1
CDC25C
MARS1
ARHGAP9
RINT1
LRGUK
BLOC1S2
PPP2R5B
AP1M1
POLG2
SLC25A14
ABHD4
SLC37A4
FAM53C
SPATA2
METTL18
C1orf112
EIF3E
DPH7
NAA35
SPOUT1
RPLP0
MLEC
IFT57
PRRC1
XPNPEP1
SLC29A3
ACSF3
TADA2B
CCDC96
SEL1L
ZC3H3
ANKRD46
TPD52L2
STYX
SH3BP5
SIRT7
PCYT2
GSKIP
ATG2B
TONSL
TCOF1
SORT1
SNX27
ADPRS
SPCS1
GLT8D1
INTS2
ERAL1
RIDA
POP1
PDIA4
LRFN4
SF3B2
TSC2
NTHL1
AHCYL1
NAP1L1
ARHGAP33
POLD1
CARMIL3
SLC29A2
COG7
PC
ENTPD5
BBOF1
TCP11L2
USP36
CDK9
AMIGO1
UTP25
POLR1B
NEU1
MKRN2
C12orf73
COX19
GLS
OVOL1
C12orf43
TMEM231
TXNL4A
RBFA
TMEM267
KAT7
SULF2
C12orf65
HRH3
TRADD
FBXL8
ZMYM5
TAMM41
CDIPT
CRELD1
IDI1
WDR37
TNFAIP1
IFT20
PEBP1
FAM76A
URI1
ZDHHC17
CTDSP2
RPS21
PSMB7
NGDN
SSR3
EEF1AKNMT
BAG6
APOM
SURF2
SURF1
H3-3B
EIF2B2
ARF3
ASPM
PDCD11
ATP5MD
ZNF706
WDR20
HSP90AA1
FSD1L
FUBP3
NUDT16L1
OAT
CREBBP
SFXN1
ATXN2
CDC25A
LTN1
STX16
PRMT2
NUP35
ANAPC5
C11orf49
ARRDC4
NOMO2
MMS22L
TBK1
CHRNB2
ZGPAT
ARFRP1
CNBP
TXNDC16
TRMT12
GNB5
RNASEH1
POLD3
HASPIN
PSMD9
HPD
ZNF17
THAP10
LRRC49
RCCD1
TMEM39A
ZNF142
BCS1L
RASA2
PLBD2
SPATA7
SLC46A1
SUPV3L1
SPC24
RAD51AP1
C12orf4
FRAT2
CCDC77
GDPGP1
CIB1
KDM5A
TMED10
XPR1
GSTO2
EXD2
RMI2
SVOP
INPP5K
ZNHIT1
PLOD3
EDC4
ZMYND19
ITGB4
GID4
ATPAF2
CLPX
SPTSSA
NOL8
CENPP
COMMD4
SPTLC1
E2F8
ADPGK
YIPF4
GET3
PHF5A
ACO2
RFX5
RNF216
C12orf29
KCTD3
ZFR
SHC1
CKS1B
DARS2
CENPL
ATG7
RRP1B
HSF2BP
DNAJC2
ZNF212
MIA3
ABCC10
TENT5C
MFSD14C
FAM8A1
PHLPP2
APPL2
LMAN2
CHD1L
PRKAB2
PIP4P2
INTS8
GEMIN5
NDUFB5
MRPL47
ERCC3
ACBD3
RELA
AP1S1
RGL2
NUP210
SNTB2
RBM28
DPY19L4
VPS13B
CBLL1
NUDCD1
WDR47
NDUFB2
BCAS1
TMED9
H1-10
CUL2
CRTC2
ZNF330
CA2
KDELR2
IARS1
MYBL1