ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089498 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◣ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
NPAS4
TRIM37
HTR5A
PFDN4
DYNLRB2
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
KPNA2
SLC12A9
ARFGEF2
APPBP2
IQGAP3
USP32
FAM72C
FAM72A
POLR2J3
RNFT1
FBXO32
RFC3
SIKE1
SKA3
MRPL57
TSR3
GNPTG
FAM72D
SCRT1
FAM72B
BARHL1
UNG
NCAPH
BCAS4
DCLRE1B
AP4B1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HIPK1
FANCD2
C12orf66
NCOA3
PPM1D
NUDT1
MRM2
DZIP3
CIP2A
TRIP13
BRD9
IQSEC3
UTP20
DSCC1
ATXN7
OAZ3
PDE4DIP
RSPH1
SGO1
PPM1E
RABL2A
CREBRF
XKR7
PARD6B
GRWD1
ZNF217
KCNH6
BCAS1
SUMF1
L1CAM
RRP15
SMG8
POLQ
LIX1L
C3orf14
NEIL3
RNF166
CTU2
CSTF1
AURKA
ZFPL1
CDCA5
C16orf46
ZNF331
CKAP2L
XRCC2
DHX40
SAP30BP
RECQL5
ATXN1L
MTFR2
NOL8
CENPP
TTF2
CYB561D1
CCNB1
CPLX2
ESPL1
YPEL2
KIF14
CRBN
SMC2
UBE2C
SKA2
PRR11
BIRC5
RAD54B
FANCI
ZNF696
METTL1
EEF1AKMT3
HSF1
BOP1
TROAP
CCDC86
INKA2
DDX20
WASHC5
NSMCE2
PRCP
DDIAS
WIPI1
RACGAP1
RAB22A
MCM7
AP4M1
ATG14
NTAQ1
NET1
NOTCH2
COG7
DOP1A
GFPT1
RRP12
NEURL2
CTSA
BUB1
TRIM33
NOL6
EDC3
CDC14B
CCT2
TTLL11
ATG101
GFOD2
HSDL1
DNAAF1
TTC27
CEP128
TRMT61A
RNF40
CCDC189
NAGPA
NUF2
MYBL2
INTS2
C8orf33
MFSD1
PGBD5
RMDN1
CPNE3
MCM10
EXO1
TTK
SLC52A2
FBXL6
PPP1R16A
MOK
PRELID3B
BICDL1
NEMP1
MAPK8IP2
TONSL
CCNA2
GTF2H3
EIF2B1
METTL2A
MED20
BYSL
CENPBD1
PIGU
ZAR1L
BRCA2
TICRR
NHP2
AP4E1
ACOX3
NRAS
NUP107
TWNK
MRPL43
AP3B2
BMP7
GTPBP4
TMOD3
DYNC2I1
NOMO3
RRM2
URB1
NME1
KIFC1
TOP1MT
RAD9A
RABL2B
DNAH7
STOML1
TBX2
MIS18A
LTV1
LRRC29
DHX37
NDUFAF6
CCNE2
ABCA5
PWP2
LOC102724159
PHTF1
KLHDC4
ACBD7
WDR4
QSOX2
FAM227B
DTWD1
SPEF2
IPO4
RTF2
CEP55
RPP40
CPSF1
ZHX1-C8orf76
ZHX1
POLR2K
SMYD5
RAD18
EEF1E1
FRAT2
EIF2D
RHEBL1
NPM1
ZNF79
THOC7
VRK1
GTSE1
IARS1
NBPF15
SQLE
MYL12B
RECQL4
LRRC14
TCF19
CCHCR1
DEPDC1B
KIF20A
BRD8
SPTLC1
WDR43
ZFAND2A
MON2
HCFC2
GLT8D2
ATP6V1C1
GGH
TASOR2
RTKN2
POC5
MRPS23
FAM207A
TACO1
PSMD4
NUB1
TOP1
OS9
MED6
DLGAP5
SARS1
ZFYVE1
SHCBP1
EIF3C
EIF3CL
ASPM
PRPF18
RNF114
CDC25B
PPAN-P2RY11
PPAN
PCOTH
MIPEP
PRMT6
NDUFV1
METTL3
NAA35
SNRPE
ERN1
DNAJA3
C11orf49
FEZ2
BLM
MARS2
WDR47
PLK4
RRP1
CENPN
AARS2
CCNG2
RAD51
HEATR5A
TTC26
TMEM186
PMM2
KLHL36
TCTN2
AMIGO1
FAM214A
CLTC
PLCG1
SPC25
ZHX3
MCRS1
ARMC2
ZBTB9
FBXO5
ZNF688
SMIM5
EIF2S1
ATP6V1D
PLEKHM3
DENND2C
METAP1D
AEN
PUF60
LOC101928764
FBXW8
AOPEP
BCAS2
IFT22
WDR59
COMMD9
TBC1D30
GNS
RXYLT1
NIPSNAP3A
TDRKH
GABARAPL2
RFC1
AP5Z1
URM1
NEK11
ASTE1
PSMA5
ATP5MG
TMEM231
TBC1D13
YWHAG
CLBA1
PLK1
HEXA
MTMR14
SLC35B1
ENTPD5
BBOF1
ATP6V0D1
PARPBP
NUP37
CCT5
ATPSCKMT
CFAP69
IFT88
DDX11
NOMO1
CIT
ROPN1L
E2F4
KAT2B
PSMB7
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
VAC14
PRMT2
FANCC
DUS4L-BCAP29
DUS4L
COG5
PRKAB1
MOCS3
DPM1
IPO11
SH3BGR
LCA5L
RMI2
C16orf71
ANKS3
CDC25A
PUS1
CFDP1
EIF3E
VANGL1
SEC22A
AGFG2
RRM2B
ETFDH
C4orf46
ACTR6
CCDC150
DPY19L4
ANGEL1
MRPL27
EME1
ANAPC7
ZNF367
CHCHD3
VARS1
GALK1
SECISBP2
WDR3
GDAP2
PTRHD1
CENPO
SGO2
TSEN2
FARSB
CKS2
PIP4K2C
ATXN3
MARCHF10
HMGB1
SAXO2
EFL1
AXDND1
RNASEH1
SNAP25
XPO4
NUDT4B
NUDT4
TRIAP1
VPS13B
TPTE
SPNS1
FIS1
GATB
DUS2
DDX28
CYB561
TMEM183A
APH1A
ZNF408
ARHGAP1
L2HGDH
DMAC2L
SURF2
SURF1
VPS50
HEPACAM2
TRMT1
INIP
ATG7
CENPA
CENPW
DYRK1B
TEDC2
GOLGA5
USP8
WDHD1
SOCS4
GRB2
PHLPP2
MELK
TRAPPC10
TMEM67
RABIF
STYXL1
MDH2
MBTPS1
AUH
ZNF622
WDR35
HMGCS1
CSRNP2
TTLL9
KLHL20
MED13
TUFT1
SENP5
HELZ
FBXW2
TSFM
ASF1B
RPS29
TPRA1
MRPS21
WDR31
ATP1A1
MDM4
LRR1
MND1
BBS1
SPRYD3
QTRT1
ATAD2
RBM28
RPIA
LMAN2
EBAG9
CSDE1
TEX10
ZGPAT
ARFRP1
WASHC2A
PTPN1
CHD1L
PRKAB2
ZNF789
TAF13
CDK1
HAT1
DNAJC2
SCFD2
LTO1
METTL6
EAF1
METTL2B
RIOK3
FCF1
AREL1
TASP1
HASPIN
RIOK1
CAGE1
NUP35
MET
ATR
SLC25A26
FSD1L
SLC25A19
RNASEH2A
HEATR5B
GPATCH11
SPATA33
NGRN
RABEPK
PRPF19
RCN2
LRPPRC
PSMD12
USP54
CDIPT
RAE1
STRIP1
COPS3
NXF1
GREB1
LSM14B
PRPF6
RBM48
PEX1
C12orf45
ADPRS
NARS2
INTS1
PRPF39
TTLL5
ERG28
VPS53
MXD4
GLE1
TBC1D31
RMDN3
FDX2
POLR2J
RHNO1
FOXM1
STMN3
NTSR2
COMMD4
PDXDC1
MRPL3
ADCK1
PRKAR1A
KLF10
RPL32
GCN1
CLCC1
ZC3H18
RSL1D1
OSTM1
ATP5F1E
NOL11
CAMSAP2
REXO4
DYNC1I2
RPL30
PEPD
CNPY3
RBSN
GOLGA3
NME2
MAPKAP1
PWP1
GTPBP10
IMP4
CCDC115
POLD3
ZNHIT1
PLOD3
TEX2
VPS45
CCDC90B
PREX1
MARCHF8
SNRPD1
PDSS1
MSH3
DHFR
FAM13B
EXOC5
AP5M1
CLCN7
NANS
CRNKL1
CFAP61
ZSCAN2
THADA
GNAI3
SPPL2A
SRD5A1
NSUN2
AMZ2
KCTD13
TAMM41
KLHL32
NDUFAF4
POLR2J2
DPH7
C14orf28
SPATA2
MRPL11
TRMT44
SLC45A3
RIF1
NEK10
ABTB1
SDAD1
C6orf89
TM2D3
CCDC146
SFSWAP
GPR89A
TTLL4
PYCR3
REXO5
ERI2
MAPKAPK5
CUL2
PIMREG
AP1M1
MAPK8IP3
CHRNA5
TRIM14
MTPN
LUZP6
NOP9
DHRS1
SRPRB
MFSD5
MACROD1
ZC3H3
SETDB1
WIPI2
NFATC2IP
CORO1B
RAD54L
TADA2B
CCDC96
TCOF1
NOMO2
MLYCD
RPS16
TMED9
NUDT2
KIF24
FBXL13
ARMC10
POLL
DPCD
PDPR
CCND3
ADAT1
PNPLA8
WDR77
ATP5PB
ALAD
CFAP206
PRIM2
UBXN11
NDUFS3
KBTBD4
CHFR
MIGA2
PRMT3
DYNLL2
MAD2L1
UTP23
PES1
CNTRL
C5
TCP11L1
SNAPC4
ESCO2
UBFD1
EARS2
HM13
TAF5
ATP6V1H
INPP5K
SF3B4
SPAG1
DNA2
KNOP1
DNAJC25-GNG10
DNAJC25
RNF115
POLR3C
ARFGAP1
SPG7
GOLGA7B
KIF18B
PUM3
LARP4
ECT2
ASNS
BRD3OS
ARL6IP1
KCNC1
TUT7
NBPF1
TOPBP1
TF
ANKRD46
GOSR2
ORAI2
SMARCD1
RUVBL1
CENPE
CDT1
RAB7A
FBXW9
NAA25
SF3B2
PIP4P2
ANKRD28
ARCN1
CYP51A1
INTS4
NEK2
DDX19A
NGDN
TMEM129
TACC3
WDR81
MMS22L
DNAJC30
BUD23
SAC3D1
B3GAT3
TSC2
NTHL1
SRRT
VPS33A
SEC13
METTL18
C1orf112
RCE1
PSRC1
ZNF107
BUB1B
ZNF778
XRN2
DERL1
FANCA
MAN2B2
PI4KB
RANBP6
KLHL18
KIF9
QTRT2
CCDC191
MMUT
CENPQ
PPP1R12B
SLC25A16
KXD1
UTP4
DERPC
CHTF8
GDPGP1
CIB1
PROSER1
NHLRC3
PSMA7
NOC4L
DDX51
PUS7
WDR70
ZEB1
SWI5
GOLGA2
LEO1
CACYBP
GPATCH4
AURKB
NUFIP1
GPALPP1
MARS1
ARHGAP9
TBC1D23
UCHL5
RO60
PMPCB
GNA13
EMC8
COX4I1
SAR1A
WDR46
PFDN6
NOP16
HIGD2A
TBC1D15
DDX42
CCDC47
MYBL1
TATDN1
NDUFB9
NUDT15
GAR1
DDX46
KIF11
HSPA5
CREB3L2
RAB5B
FAM174A
C11orf24
CANX
SH2B1
TUFM
PDIA5
HNRNPF
NLE1
ECSIT
MRPL21
IGHMBP2
NBN
PSMB4
INO80
RBM19
PMS2
AIMP2
CENPH
PIF1
RIDA
POP1
NOB1
CFAP54
HGS
ARL16
S100A13
CHTOP
ARHGEF35
SHQ1
THAP10
LRRC49
NDUFB2
XPO6
PRPF4
CDC26
HRH3
NSDHL
CETN2
FAM185A
LRFN4
USP15
PRPF3
MYG1
RABGAP1L
SLC27A2
VTI1B
CCP110
CYBA
DENND1B
TADA3
ARPC4-TTLL3
ARPC4
MYL12A
GUSB
TKFC
DDB1
DMXL2
WDR25
WARS1
CDK5RAP2
WASHC2C
SETD4
PDCD2L
RIPK2
PRXL2C
DIAPH3
MKI67
VPS11
DHODH
LSS
GMCL1
STX7
EIF3B
GSTO2
GOLGA1
HOMEZ
SLC27A3
PPRC1
TMED5
CCDC18
SPEF1
ASB8
PALB2
DCTN5
SYT5
LIN9
PRKDC
MCM4
MTX1
THBS3
SIRT4
FICD
MTRES1
VPS37A
CNOT7
RRP36
WDR74
VMP1
PTRH2
PEX3
ADAT2
RSRC1
RHBDD2
NSUN5
SPIRE2
WDR27
C6orf120
IFRD1
ETFRF1
CFAP94
CD55
AP2A1
SNX4
PDZK1
WFDC3
DNTTIP1
POLR3B
CBX1
FAM210B
GPR89B
CS
RNF121
LOC100133315
DCXR
COX19
POLR1B
TRIP4
FLAD1
TFPT
PRPF31
MEA1
HJURP
ASCC2
NOP58
ICE1
TOMM40
UBN2
PPIL1
ANAPC10
ABCE1
ATG16L1
ZDHHC24
ACTN3
TARS2
SCRN3
CIR1
SLC25A44
SPTLC2
CTTN
LYRM7
KLHL24
OXNAD1
DPH3
SUPT4H1
TMEM203
NDOR1
MAX