ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116422 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◣ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
HTR5A
METAP1D
FBXO5
UTP20
SUMF1
XKR7
MTFR2
RAD51
UTP25
RBM19
CCNB2
RRM2
EXO1
SGO1
NEIL3
UFD1
CDC45
VARS1
PIGU
NUF2
KIAA0895
ANLN
QTRT1
GRWD1
TRMT1
KLHL18
KIF9
NCLN
NEK2
GPATCH3
RRP15
XRCC2
IQGAP3
NCAPH
IQSEC3
WDR4
NUP214
CCNA2
SHCBP1
TRIP13
BRD9
ESCO2
UNG
GTF3C4
DDX31
DPH2
CFAP299
GPATCH4
DNA2
DHX37
RRP12
RAD54L
FANCI
NOL7
TROAP
CRNKL1
CFAP61
C12orf66
BLM
FAM72C
FAM72A
CKAP2L
PPIL2
KIF2C
PGBD5
COMMD9
MAPK8IP2
WDR74
EBNA1BP2
CFAP57
FAM72D
URB2
TAF5L
URB1
MND1
RRS1
BUB1B
C16orf71
ANKS3
KAT2B
TTLL9
TICRR
INTS7
DTL
TOMM40
PMS2
AIMP2
KIF15
KIAA1143
L1CAM
BIRC5
ODF2
PLK4
SMTN
TTK
EXOSC5
BCKDHA
KIF18B
CKMT1A
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
FAM72B
SPNS1
C16orf46
CCNB1
CDC6
MOK
TTC27
RNF40
CCDC189
METTL1
EEF1AKMT3
MIS18A
STIL
BARHL1
KIFC1
NAGPA
LTV1
GATB
CKMT1B
HSPA9
SMYD5
CYB5R4
POU2F1
CCT2
CDK7
SUPV3L1
IREB2
NEU1
SLC7A5
FBXW9
SCRT1
ADPRS
ZNF688
KIF20A
BRD8
POLR1B
CELSR3
SKA3
MRPL57
NOL6
PBK
TADA2B
CCDC96
POC5
RABL2B
EDC3
ACOX3
WDR46
PFDN6
PPAN-P2RY11
PPAN
UBXN11
TAF13
SPC25
CCDC86
KNL1
CENPW
FANCD2
CDKN2D
SCFD2
NOL8
CENPP
SMC2
CENPE
CRKL
VPS33A
IFT172
AXDND1
PUS1
CDC25A
PRCP
DDIAS
TTC26
PPP1R10
MRPS18B
TTF2
GNL2
AGFG2
SETD4
SNRPD1
RNF166
CTU2
MARCHF8
SPIRE2
DLGAP5
TIMM23B
PARG
ALKBH8
NUDT15
MRM1
SMC4
IFT80
MDN1
AURKB
CCNG2
FARSB
ADK
AP3M1
RAD18
RPP40
NOM1
ARHGAP11A-SCG5
ARHGAP11A
TMED5
CCDC18
LRGUK
SLC12A9
WDR62
THAP8
MAD2L1
ZNF593
C1orf232
USP2
DZIP3
CIP2A
CEP55
CFAP410
WASHC2C
WASHC2A
CYB561D1
PWP1
CCDC113
CDK1
CPLX2
CDC25C
DERL3
SNRPD2
QPCTL
COP1
HMGB1
QSOX2
C1orf109
CDCA8
EIF2D
DDX21
UBFD1
EARS2
OIP5
NUSAP1
ZWINT
H3C2
HMGB2
KIF14
ZFPL1
CDCA5
RABL2A
MYBL2
CLSPN
ANKHD1-EIF4EBP3
ANKHD1
NBPF1
RPSA
CENPS-CORT
CENPS
TCF19
CCHCR1
NOP16
HIGD2A
TMEM248
DYNC2I2
TTC30A
FBXL13
ARMC10
HSDL1
DNAAF1
POLQ
TRMT61A
UBN2
TFB2M
CNST
SPCS1
GLT8D1
PUM3
THADA
FDX2
GCDH
NME1
MRPL40
HIRA
DIAPH3
C1QBP
SKA1
MRTO4
EMC1
CEP135
SRM
DYNC2I1
ZNHIT6
UTP15
ANKRA2
SLC19A1
PPP1R13L
POLR1G
TRAPPC6A
BLOC1S3
ATAD2
CEP43
AUNIP
DUT
PHB2
MON1A
SPC24
ZNF74
MCM7
AP4M1
EPHA10
TRMT6
MCM8
CSNK1G1
PLK1
COG7
TPH2
YEATS4
UBE2T
SYT5
DDX49
COPE
DSCC1
PNPT1
TRIP12
FBXO36
ATP6V0D1
TBRG4
SNX8
EIF4EBP1
PRPF38A
ORC1
MRPL1
PSMD14
ACTR6
VRK1
KCTD9
CDCA2
DDX11
SAR1B
DYNLL1
CNOT4
PRMT1
PPT1
MSH3
DHFR
MCM10
DIMT1
FAM200B
PDSS1
DDX19A
NDC80
METTL4
RNASEH1
PEPD
ZSWIM9
LIG1
MNS1
HPCA
MPHOSPH10
MCEE
PAQR4
KNOP1
HCFC2
GLT8D2
HAUS7
PSME3
CAD
TMEM186
PMM2
PC
MARS2
NPM1
CDC7
LYRM4
FARS2
ESPL1
TIGD5
EEF1D
TRAIP
TIMM23
CDC37
RER1
MORN1
FANCM
POLR1F
DEPDC1
ATP5MC1
MAK
WDR61
UBE2L3
RIMBP3C
RIMBP3B
MACO1
TIGAR
CR1L
TIMM44
TMEM150A
ZGRF1
LARP7
DHX16
DDX42
CCDC47
CENPH
FAF1
SLC39A6
ELP2
MFSD1
GTF2H3
EIF2B1
VPS50
HEPACAM2
TSFM
KTI12
RIMBP3
DPP3
DNAJC6
ZAR1L
BRCA2
IPO4
SYNJ1
POMZP3
MCOLN1
GTSE1
NUP35
CRCP
SECISBP2
PPID
IQUB
PRMT2
ING3
MRPS28
YDJC
ASPM
LTN1
SDF2L1
CENPN
G6PC3
NUDCD3
RAB37
HAGH
FAHD1
CENPM
MTR
RPUSD4
FAM118B
ASF1B
MRPS2
C9orf116
CHRM4
PRAME
SHC1
CKS1B
TOP3B
SNRPE
PDE8A
PCOTH
MIPEP
E2F3
DYNC2LI1
SLC38A7
RECQL4
LRRC14
DISP2
C5orf34
CEP162
RCC1
ENDOV
MED15
SNAPC5
ZC3HC1
PPIL1
ZNF239
CCDC15
ANAPC1
HEXA
RPUSD2
MAP3K7
MAN2B2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
FNBP1
GFM1
EIF4H
HROB
DCTPP1
C12orf43
MRPL27
EME1
ECSIT
ALG1
FOSB
MTF1
WFDC3
DNTTIP1
C22orf39
HSP90AB1
GAR1
SGO2
AKR1A1
NOS3
YIF1A
PDIK1L
CCDC146
FBXO48
APLF
ACOT7
HEATR1
BBS5
FKBP1A
QTRT2
CCDC191
CLCC1
IMP3
RHEBL1
PARPBP
NUP37
ZNF92
FANCE
TOM1
MED20
BYSL
TPX2
MRPL4
NOMO1
LARS2
UBIAD1
NECAP2
SSBP1
DUS3L
PPM1F
RMC1
PDE4C
DGCR2
KLHL22
C6orf89
LSS
NUDT2
KIF24
GMNN
WDR27
C6orf120
UTP23
PNO1
ANAPC10
ABCE1
IARS1
MYBBP1A
DHCR7
GTPBP4
DUS4L-BCAP29
DUS4L
COG5
EXOC2
BBS12
NUB1
CENPF
EIF3M
THOC3
FZR1
ZBTB9
HECTD3
RCCD1
CBWD5
SASS6
CBWD3
CBWD6
ZNF485
ZC3H15
DNAH7
PDCD2L
SCAP
SPATA4
PSMG4
KCNAB2
COX14
RBKS
BABAM2
WDR73
TMEM120B
CREB3L2
NT5DC3
TTC12
ATR
DNAJC11
ARL8B
RBM28
MIIP
RSPH3
RTF1
REEP6
PCSK4
GPAM
ZNF726
TSEN2
XPO5
POLH
ING2
ZSCAN2
RRP1
STAM2
VAC14
PDZD11
KIF4A
CHCHD3
EXOSC3
TWNK
MRPL43
SND1
CEP295
SEC16A
C9orf163
FANCF
SFXN2
ARL3
ATG14
C12orf45
SUGP2
ARMC6
IQCH
AAGAB
B3GNTL1
BIN3
TMEM191B
ARMC2
AP5Z1
TRMT2A
RANBP1
TOMM22
NAT10
PIMREG
POC1A
CCDC90B
EFCAB11
TMEM191C
ZSWIM8
SMN2
SMN1
TMEM175
GAK
GPN2
NOL10
ZNF76
MOSPD2
FANCB
PPA1
ZNF718
ZNF595
TOP1
SLC25A16
SH3BGR
LCA5L
ATG101
SPEF1
METTL18
C1orf112
LARP4
PABPC1
CSTF1
AURKA
CDC20
PWP2
LOC102724159
RNASEH2A
RRP9
PARP3
MAK16
TSEN54
CASKIN2
FAM174A
HPS3
TTC4
BLOC1S1
LONP1
CATSPERD
TAF4B
TSR3
GNPTG
GGH
BRMS1
ATG16L1
PSRC1
WIPI1
FPGS
HJURP
YIPF3
POLR1C
ZCCHC7
TRIP4
BRCA1
SLC35A2
THAP7
ZNF324
NUP205
RPIA
HM13
ZNF771
TRIM14
RIOK3
KLHL12
LZTR1
PIAS1
CPNE9
DPH1
SYS1
SRSF7
ZWILCH
RPL4
C21orf58
PCNT
SCN3B
ZNF778
POLR3D
SLC39A11
ATAD5
DNAJC9
LUC7L2
ZDHHC3
EXOSC7
SLC25A33
LSG1
DUSP23
TTC30B
NDUFAF6
CCNE2
RPL6
HSPBP1
PTPN11
HES3
GTPBP10
SLC25A51
SAP30
MYO9B
HAUS8
DIABLO
UBXN10
PLA2G2C
COMMD4
DARS2
CENPL
ERI3
NIPA2
PUS7
XYLB
USP20
C9orf78
SPOUT1
MTCH1
LCMT2
ADAL
ATP6V1C1
VTA1
NMBR
WDR36
CFAP43
TTC13
ARV1
AEN
EEF1E1
NLE1
LIN9
ZNF695
IBA57
TRAPPC2L
GALNS
CHGB
MZF1
RTL10
GNB1L
NOC4L
DDX51
UMAD1
POLR1E
CCSAP
CD320
RPF2
TOR1A
EIPR1
ZNF888
PNPLA8
MRPL24
ZFP91
NRL
DCAF11
TP53TG3F
LOC102723655
DHDDS
CTU1
SETD6
YPEL1
DHODH
RUVBL1
NAGK
MPHOSPH6
RBM34
POLR2J2
GDAP1
PAK1IP1
C6orf52
ERLIN2
PRKDC
MCM4
OGG1
DYNC1I2
ENTPD5
BBOF1
RBM6
TRUB2
COQ4
BICDL1
NUP93
C17orf97
TASOR2
ZMPSTE24
ZNF107
TUBA1A
TAP2
PISD
SIRT3
PSMD13
MYBL1
SNRPC
SMPD2
PPIL6
GPR89A
SSBP2
EEF1AKNMT
HAT1
ZNF519
OSGEP
APEX1
MTPAP
FSIP1
ZNF529
RAB4B
COMT
PPIH
MRPS23
RPGR
KIF23
ANAPC5
TK1
AFMID
RPTOR
RNF187
VPS52
RPS18
P2RX6
TAMM41
SPRYD4
CUTA
EIF3H
INIP
PDCD6IP
TBXAS1
HIPK2
TBC1D30
GNS
CZIB
OGFR
DDX46
SEC24C
LOC102723713
TMEM222
TIMM10
RAD51AP1
C12orf4
TCTN2
PLEKHM1
SPRTN
EXOC8
FLAD1
NOLC1
RCL1
DHX35
MMUT
CENPQ
MELK
C5orf51
CFAP298-TCP10L
CFAP298
DDX5
CEP95
ATP6V0E1
C20orf96
CEP128
ADAT1
RIOK1
CAGE1
RPS16
H3C15
H3C14
PTPN23
DBF4B
ATIC
COQ8A
KNTC1
PFDN2
NIT1
MIER1
DNAI4
FBXW8
POLD2
MTRNR2L8
ASB8
RMI2
ELP1
ABITRAM
PDCD2
UBL7
PDPR
TP53INP2
PPAT
PAICS
TSG101
TIMELESS
WDR43
POLL
DPCD
PBRM1
GNL3
TRIT1
MKNK1
NEMP1
ZBTB49
LYAR
NOMO3
TOR1B
TOP3A
SMCR8
KIF22
BOD1
ELOF1
MOCS3
DPM1
JMJD7-PLA2G4B
JMJD7
PSMG1
TFAM
RPAP1
DOP1A
TDRD7
RXYLT1
UBE2G2
FAAP24
CEP89
TMEM43
CHCHD4
SNAP29
PI4KA
SLC4A2
KATNB1
C8orf33
RABIF
NEURL2
CTSA
TRMO
RPUSD1
CHTF18
TRIAP1
KATNA1
TMEM241
EIF4E
XPO6
SNRNP25
POLR3K
ODC1
SRPRB
CNPY3
SPATA33
TTC16
PTRH1
KDM2A
EXOSC2
SLC35B3
TMC6
NOMO2
CDK11B
CDK11A
ZNF669
VPS35
BAG6
APOM
SLC52A2
FBXL6
RBBP5
H4C14
H4C15
TTF1
UBR3
KLHL32
NDUFAF4
KLHL20
ATP6V1H
HSPH1
DUSP12
EIF2B3
PEX10
HNRNPH3