ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX265234 | ME-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◣ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
HTR5A
PI16
CRNKL1
CFAP61
RPS29
XKR7
OGDH
CYB5R4
TRMT1
UTP20
BBS5
GSTA4
QTRT1
NOS3
ESCO2
IDH3B
SPCS1
GLT8D1
WDR74
TPH2
FANCD2
RRP12
PRCP
DDIAS
NUDT15
MTRNR2L8
MRPL34
USP35
KCTD21
FAM72B
NUF2
GRWD1
WASHC5
NSMCE2
CCDC107
SLC26A11
SLX1B
SLX1A
BOLA2B
BOLA2
RAB27B
FAM72C
FAM72D
FKBP1A
WASHC2C
MTFR2
FBXW9
RRM2
REXO5
ERI2
BOLA2-SMG1P6
NLRX1
CCNG2
FAM72A
TAF13
PPP1R16B
MARCHF8
WASHC2A
CDC25A
SGO1
VPS50
HEPACAM2
CENPM
ATP6V0D1
TONSL
AP3D1
FBXO5
NEIL3
CRBN
CCNB2
AP3M2
POMZP3
CCNB1
RAD9A
RAD54L
KIF2C
CCDC86
DDX49
COPE
NCAPH
CEP55
TFPT
PRPF31
OSCAR
NDUFA3
EXO1
SPNS1
TOMM40
TEX33
DZIP3
CIP2A
RABL2B
LAIR1
VPS11
CKAP2L
MRPL21
IGHMBP2
ZBTB45
SUMF1
TRIP4
GCDH
RPUSD4
FAM118B
MCOLN1
CENPW
ITGAM
NDUFAF5
ESF1
C16orf91
WDR46
PFDN6
PARP2
MTRNR2L2
EXOSC5
BCKDHA
PC
ZNF17
POLQ
YIF1A
MARCHF2
CLUAP1
IPO4
PIGU
STIL
NARS2
RNF121
LOC100133315
MRPL4
CELSR3
CWF19L1
ECSIT
HAGH
FAHD1
SHC1
CKS1B
HSPBP1
PPP1R16A
PINX1
KIAA0895
ANLN
UBE2C
BIRC5
CRKL
SUPT7L
SLC4A1AP
TTK
EIF2D
RABL2A
OSBPL7
CHGB
GINS4
TTC27
OSBPL11
H4C3
SMG8
SPEF1
LRRC47
SCFD2
MCM10
CEP135
EIF3H
NUDT2
KIF24
POLD3
NUFIP1
GPALPP1
NUMA1
LRTOMT
TRAPPC6A
BLOC1S3
RBKS
BABAM2
NDUFV1
BRMS1
NCAPH2
LMF2
PLK4
NAGK
ZFPL1
CDCA5
DLGAP5
ZGRF1
LARP7
ZNF335
TRAIP
LRRC29
KAT2B
DNA2
SETD1A
MVB12A
BST2
RFC3
KCTD9
CDCA2
MIS18A
NPM3
ZNF688
ATP6V1C1
NAGPA
RNF40
CCDC189
RAD18
KIF18B
CDC20
RBM48
PEX1
ADAM28
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C1orf109
CDCA8
TRMT6
MCM8
POLR2J3
DIAPH3
TM6SF1
PIH1D2
NKAPD1
SMYD5
PXMP4
SKA3
MRPL57
TRMT61B
POLR2K
ERAL1
URB2
TAF5L
MOCS3
DPM1
RNASEH2A
PIGN
ZNF830
CCT6B
KXD1
ZPR1
UQCC1
MAD2L1
TRIP13
BRD9
CDC6
FAM200B
KNOP1
GPAM
ERLIN2
TTC31
CCDC142
SULT1C2
CCNA2
MCM7
AP4M1
ZNF331
TMEM126A
RIOK3
NARS1
C3orf86
TEDC2
YBEY
GATB
WDR62
THAP8
HMGB2
TYROBP
WDR4
SKA1
WRN
PURG
SF3A1
CCDC157
KIF20A
BRD8
ACTR6
GET3
PIK3R2
DEPDC1
GPATCH4
CLEC4A
ACOX3
C20orf96
TOMM22
SNAP25
PCNA
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
RPS6KB2
DSCC1
INKA2
DDX20
RCE1
SHQ1
WFDC3
DNTTIP1
DDX46
ATP5MG
RNF187
C8orf33
RAD51
INTS7
DTL
TAF3
DMAC2
SMC4
IFT80
POLR1F
C11orf24
SAP30BP
RECQL5
NEURL2
CTSA
ZNF778
CSTF1
AURKA
TMEM67
POLR3D
BRF2
NEK4
CCDC83
IQSEC3
BPI
SNRPD2
QPCTL
CDKN2D
ARMC1
C18orf21
UBXN11
EIF1AD
BANF1
MRPL48
PACRGL
TBX6
IQGAP3
KLHL18
KIF9
TMEM248
DPY19L4
BBS1
UTP25
HMGB1
NEK2
ING2
DHCR7
MRPL1
ZSCAN30
GPATCH3
URB1
ALG8
TIPARP
PTK2
MAPK8IP2
TTC26
RSPH1
PNPT1
USP2
CPEB4
MNS1
LAMP1
PGD
AGFG2
OIP5
NUSAP1
POU2F1
BNIP3L
ATP6V1H
PCNP
TACC1
FDX2
EFHC1
UBL5
VPS37A
CNOT7
SLF2
STMN3
UBA52
UFSP2
TIMELESS
SCP2
HM13
SECISBP2L
HROB
NAT10
DDX41
RTTN
BIN3
ZNF165
DNAJC28
XRCC2
SDAD1
ZSWIM8
CDK5RAP1
CHCHD6
FANCI
METTL18
C1orf112
DNAJC11
RCBTB1
TMEM199
POLDIP2
MRPS28
RRP15
NOC4L
DDX51
RPS7
ALKBH3
ZAR1L
BRCA2
LARS2
PPME1
C2CD3
FZR1
ZNF43
SYNJ1
RUVBL1
VPS45
INTS4
NEMF
MOK
TMEM101
SPATA2
PPIL1
COMMD1
TROAP
POLR1H
TMEM230
KIF15
KIAA1143
TTLL5
ERG28
DCP1A
KPNA2
BUB1B
RNASEH1
AHCY
PPIG
MRGPRX2
PSME3
SIX5
DOHH
SLC35F2
CDC25B
ZNF805
TIGAR
TWNK
MRPL43
PSMF1
P4HA1
DLAT
HSPH1
UBIAD1
GFM1
ZC3HC1
VPS33A
THADA
GPN1
CCDC121
RPTOR
CACTIN
SLC39A6
ELP2
QTRT2
CCDC191
TPX2
SLC25A16
BLM
TOM1
AAR2
ANKRD13D
SPC25
CDK1
NAPA
DNAJB12
NOM1
WDR53
FBXO45
GATAD2A
NHP2
UBE3B
KCTD10
SLC35E1
UBXN6
ZBTB40
TSFM
AARS2
PIK3C3
SPATC1
METAP1D
MAK16
POLL
DPCD
CFAP43
DHDDS
UVRAG
EIF3C
EIF3CL
SNRPD1
RRP9
PARP3
IQCH
AAGAB
FDXACB1
C11orf1
CENPS-CORT
CENPS
ROPN1L
TPRA1
LOC101928764
EEF1E1
ZNF696
OXNAD1
DPH3
DYNC1I2
TBC1D19
STK32C
LRRC27
TSR3
GNPTG
PSMB2
NOL6
RTF2
CFAP53
RAD54B
GTSE1
HEATR1
TFIP11
MTBP
MRPL13
THAP12
GVQW3
ARAP1
ABTB2
VIM
TSEN54
CASKIN2
ALKBH8
TMEM41A
HAX1
AARSD1
KIFC1
ZHX3
SASS6
SF3B2
PEX19
CEP164
MMAA
RNF149
CWF19L2
SMIM5
VIRMA
RFX1
TMEM186
PMM2
SHCBP1
AJUBA
MZF1
TRIM37
WIZ
DAXX
STARD3
BUD13
MRPS35
RBBP5
PPIL4
UTP15
ANKRA2
LTV1
RRS1
POLR3F
DZANK1
INO80B
KIF11
SART1
NSUN6
CCDC146
RBM42
PISD
BLOC1S1
PYGB
MRPS23
ZDHHC24
ACTN3
CHMP7
OSTC
UNG
TBRG4
MDN1
POLR1B
RAD51AP1
C12orf4
TXNL4A
RBFA
GINS1
NR1H2
C16orf71
ANKS3
ABT1
PIGK
WDR90
TOP1
THNSL1
RBM28
NGDN
PRKCSH
CCDC151
ODF2L
TICRR
COMMD9
CDK7
CWC25
STAM2
IFT46
MFSD1
RTEL1
ZNF2
DBF4B
DPP3
GBA
TIMM23B
PARG
ARSG
CFAP206
PSMD3
ZNF724
C12orf43
GDAP1
RHBDD2
CCDC90B
BBS12
EIPR1
RPUSD2
CCDC97
PLRG1
HEXA
GPR89A
PEPD
CYC1
UBE4A
SUGP2
ARMC6
SPATA4
ITGB3BP
EFCAB7
IRAK1BP1
APBB1IP
SPINK4
PYCR3
LYRM4
FARS2
WDR81
TSN
CYRIB
HIF1AN
NBPF1
MED23
SYF2
UBE2O
AANAT
BABAM1
MMUT
CENPQ
PDZD11
KIF4A
PBRM1
GNL3
CDKAL1
DNTTIP2
NDUFC2-KCTD14
NDUFC2
NME7
BLZF1
CHEK1
RBBP6
EDC3
SQLE
EIF3E
LTN1
INTS12
GSTCD
DLG2
TMEM126B
SRSF7
CARS1
ERI1
AP2B1
RGPD2
RGPD1
IQCG
MON1A
LMLN
YIPF2
TIMM29
ZNF557
GGNBP2
NEMP1
SSBP1
CDC25C
OPA1
MRPL45
SMPD4
MZT2B
TAF2
GTPBP10
ADPRS
ABCF1
CCS
CCDC87
GOSR1
SDCBP2
UFD1
CDC45
XRN2
STAU1
DDX27
SRPRA
CBWD5
SEC13
DCPS
PDCD11
ATP5MD
DNAJC30
BUD23
MAGOH
ZNF396
CFAP20
EBNA1BP2
CFAP57
ELOA
CD1A
EIF3K
SRPRB
TMEM150A
ZNF408
ARHGAP1
CFAP54
GOLGA7
TES
SH3YL1
ACP1
TTF2
NOP16
HIGD2A
UTP23
TATDN1
NDUFB9
TBCB
POLR2I
RNF114
ENDOV
SCNM1
LYSMD1
MAPRE2
NET1
CBWD3
CBWD6
DIABLO
PSMD14
RAB37
ZNHIT6
NUDT8
CDS2
SLC25A51
IL16
BCAS3
SFSWAP
VPS35
RPGR
MED6
ARMC2
VTA1
NMBR
SKIV2L
NELFE
SLC19A1
NAA40
GSTO2
RFX3
CDYL
OTUD6B
CCAR2
ZNF66
CPA3
TCHP
FAM204A
STOML2
SLC25A20
ZNF721
PIGG
PPWD1
CENPK
SNIP1
H4C8
ASPM
COG7
COMMD4
SLC39A3
ZCCHC4
C1orf159
DPH2
STX16
POLR2J
TASP1
GFUS
SCAMP4
ADAT3
HYLS1
DDX21
HAT1
LONP2
ABCC11
RBL2
PLK3
ATP5F1A
TRMT61A
NOMO1
BRCA1
FAAP24
CEP89
HECTD3
TMEM242
CCDC15
AUNIP
FBXO43
FAM111A
KCNAB2
TEFM
ABCB6
KHDRBS1
RFFL
POC5
RPP40
SETD4
STAT1
SFXN2
ARL3
RCAN1
MRPS31
PAAF1
COA4
FRA10AC1
C20orf203
METTL1
EEF1AKMT3
PPRC1
NOL10
CEP43
EXOC1
SIK3
EXOC2
RPS8
SIRPB2
RPL6
POC1A
PTPN11
RCL1
IQCE
BUB1
IFT172
NUDC
MTHFR
CLCN6
SNX19
RASGRP3
SIGLECL1
RBM19
EIF2S1
ATP6V1D
KLHL12
NOC3L
SIRT4
REXO2
CLSPN
TIMM23
AAAS
NUP42
MRPS16
ZSCAN5A
UBA5
ACAD11
NME1
C12orf45
ADK
BMS1
PAXBP1
MRPL27
EME1
DNAJC9
TTC5
EFCAB11
LMNA
GNL2
RNF115
POLR3C
MORN2
DHX57
NDUFAB1
NDUFS7
XAB2
SMIM12
NPAT
ATM
NLE1
PPIH
PRKDC
MCM4
SNX8
ZNF497
NBAS
PCOTH
MIPEP
PALB2
DCTN5
MXD3
TPD52L2
MRE11
ANKRD49
XPNPEP3
ST13
SPC24
BOD1
RFC4
KMT5B
SUPV3L1
ALG1
PPIA
ARHGAP25
SLC52A2
FBXL6
TCTN3
CDADC1
BORCS7
RNF166
CTU2
GTF2H3
EIF2B1
ZBTB49
LYAR
TRMT44
SF3B5
VPS72
SETD6
BIRC3
PSD4
NUP107
RRP1
FLAD1
NOLC1
MRPL3
VMP1
PTRH2
CEP162
LRFN4
ZNF726
PRMT1
EIF3F
MATR3
EFTUD2
CCDC103
LOC101927572
ALKBH6
GLMP
NUCKS1
CYB561D1
TOM1L2
DRC3
NDUFS3
KBTBD4
COX14
FAM83D
CLPB
TXLNA
ALG9
CCDC77
RARS2
ORC3
IFT57
COP1
KDM5A
LONP1
CATSPERD
WDR18
HMGCL
FAM222A
H2AX
IPO13
PDE4A
TADA2B
CCDC96
RAB18
NUP93
B3GALNT2
NF2
TTLL9
MPHOSPH10
MCEE
LRRC59
FRAT2
FNTB
PRCC
FUT11
ATP2B4