ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089495 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◣ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
TUBD1
RPS6KB1
TRIM37
NPAS4
BRIP1
PFDN4
USP32
ARFGEF2
ZNF217
FAM72C
FAM72A
APPBP2
IQGAP3
SKA3
MRPL57
TEX14
RAD51C
SLC12A9
PARD6B
RNFT1
PPM1D
DZIP3
CIP2A
FAM72B
IQSEC3
SIKE1
HIPK1
DHX40
BCAS4
C3orf14
UNG
NCOA3
CREBRF
C12orf66
TSR3
GNPTG
ZFPL1
CDCA5
SGO1
CRBN
FAM72D
RNF166
CTU2
METTL1
EEF1AKMT3
ZNF331
NCAPH
DYNLRB2
FBXO32
FANCI
TICRR
CPLX2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MOK
RAB22A
BARHL1
HTR5A
BLM
DSCC1
ATP6V1C1
ATXN7
PDE4DIP
DYNC2I1
MYBL2
NOTCH2
CEP128
HSF1
BOP1
MED20
BYSL
UBE2C
ZHX3
SCRT1
NAGPA
KPNA2
XKR7
MTFR2
CIT
MIS18A
SAP30BP
RECQL5
NET1
VAC14
TRIM33
UTP20
TRIP13
BRD9
VARS1
ZSCAN2
MCM7
AP4M1
RRP15
TROAP
RMDN1
CPNE3
CCNA2
TTK
TTLL11
MCM10
TOP1MT
POLQ
EXO1
EIF2D
KIF14
SPNS1
USP14
CCT2
SMG8
TONSL
TRMT61A
VRK1
WDR4
DCLRE1B
AP4B1
NOL8
CENPP
PGBD5
CCDC200
TTF2
XRCC2
SNAP25
SKA2
PRR11
NEIL3
POLR2J3
ZFYVE1
FANCD2
DHX37
RAD51
RACGAP1
CCNG2
CSTF1
AURKA
WASHC5
NSMCE2
GFPT1
TBX2
FAM227B
DTWD1
SGO2
ZNF688
STOML1
WASHC2A
BCAS1
RRP12
LTV1
BIRC5
RNF40
CCDC189
PRELID3B
SMYD5
PTRHD1
CENPO
SUMF1
RPP40
YPEL2
NUP214
BUB1
NEURL2
CTSA
APH1A
TEDC2
MFSD1
TASOR2
MOCS3
DPM1
TAF5
OAZ3
KLHDC4
ATG101
LIX1L
DDX11
WDR3
GDAP2
CYB561
IPO4
NOL6
NOMO3
BMP7
COG7
PDSS1
KCNH6
POC5
GTSE1
DUS2
DDX28
DNAJA3
MDM1
ATP1A1
CCNB1
MRPS23
TSEN2
DOP1A
FBXO5
GRWD1
CKAP2L
AP4E1
ADCK1
HMGB1
PHTF1
RUVBL1
FAM174A
PMS2
AIMP2
RTF2
INTS2
SCFD2
GTF2H3
EIF2B1
NBPF15
DEPDC1B
RECQL4
LRRC14
NOM1
TRPM7
NUF2
DLGAP5
RAD54B
RFC3
TBC1D30
GNS
THOC7
NEMP1
LRRC29
UTP23
TADA3
ARPC4-TTLL3
ARPC4
UTP4
DERPC
CHTF8
ZBTB9
GGH
ATP5F1E
PRMT6
ABCA5
CYC1
RAD54L
ESPL1
REXO4
NME1
ATAD2
RABL2A
GCDH
CCT5
ATPSCKMT
STAT1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
MAD2L1
EIF3C
EIF3CL
MED13
RAD18
PWP2
LOC102724159
SRPRB
PIF1
SPG7
TCF19
CCHCR1
PTPN1
PUS7
FAM13B
SMC2
TFB2M
CNST
NAGK
TBC1D31
KCNMB4
VPS50
HEPACAM2
NUDT4B
NUDT4
SLC52A2
NOL10
FBXL6
CNPY3
MLYCD
TMEM186
PMM2
ZNF367
PHLPP2
CLTC
LSS
NTAQ1
SLF2
HEATR5B
GPATCH11
CHUK
CENPA
HAUS7
TTC27
PPP1R16A
FBXW8
GPR89B
OXLD1
CCDC137
CCDC146
SHC1
CKS1B
SLC25A19
MYO5C
ESD
SLC25A26
GTPBP4
SPEF2
OXR1
EEF2K
PRMT2
PRKAB1
PLCG1
HSPA5
SQLE
FIS1
KLF10
ZAR1L
BRCA2
KMT5A
NOP16
HIGD2A
METTL2A
FAM207A
CDC14B
FANCC
C7orf26
UBR5
EDC3
KAT2B
SYT5
CPSF1
ATG16L1
ALAD
MDM4
ERN1
MFSD14B
CDC25A
ASB8
LRFN4
DLD
PIGU
RRP1
RHEBL1
STYXL1
MDH2
IDH3A
RRM2
MYBL1
KCND3
MND1
TAF13
PSMB7
ZC3H3
DNAH7
AP3B2
POLR2K
PSMA5
RBM8A
NUP107
ANKRD28
WDR46
PFDN6
CDK1
SPTLC1
TIMELESS
RNMT
FAM210A
OVOL2
STK36
RNF25
L1CAM
RSPH1
CDK7
NUDT1
MRM2
METTL3
NCKAP5L
TM2D3
ARHGEF5
KIF11
PPIL1
RINT1
SLC25A32
DCAF13
GALK1
TERF2
C8orf33
ARFGAP1
ANKRD46
RFC1
MBTD1
UTP18
ZNF680
USP10
CCDC86
C6orf89
PIP4P2
DPH7
LMTK2
RABGAP1L
PRCP
DDIAS
CENPN
DUS4L-BCAP29
DUS4L
COG5
HEATR5A
USP15
ZNF789
WASHC4
CENPW
LOC101928764
BICDL1
MRPL4
PSMD12
PCNX3
ASCC3
STK3
URB1
GPATCH4
DDX21
ZSWIM9
LIG1
ZNF212
IFRD1
SFSWAP
SMIM5
XRN2
SRD5A1
NSUN2
VPS13B
WDR77
ATP5PB
CKAP5
KIF18B
GPR89A
MYL12B
ROPN1L
CCNB1IP1
SCRN3
CIR1
LSM14B
VAMP3
NDUFAF6
CCNE2
RTKN2
EIF3E
TPTE
ACOX3
CYB561D1
KNOP1
IMP4
CCDC115
PPM1E
PYCR3
TMOD3
GOLGA3
ZEB1
PAM16
CDK5RAP2
C16orf46
RBM28
ZNF778
TAMM41
IFT88
PRPF3
GOLIM4
VIRMA
CNPY2
TSFM
PLK1
MTMR14
SH3BGR
LCA5L
RFWD3
CDT1
CACYBP
ZNF16
CREBBP
CCDC150
EXOC2
RUBCN
OTULIN
KCTD13
CDKL1
C2orf50
FAM214A
HCFC2
GLT8D2
SNX16
NUDT2
KIF24
TACO1
PRPF18
RXYLT1
POLR3F
DZANK1
CSDE1
SEC61B
CLCC1
ECT2
RAE1
GABARAPL2
HELZ
XPO4
ZNF706
ZER1
NAF1
BRMS1
NOMO1
CKS2
VCPKMT
YIPF4
HMGCS1
POLG2
DLST
ARPP19
MRC2
PBK
TRUB2
COQ4
GPAM
DEPDC1
AOPEP
PLEKHM3
MFN1
ARRDC4
G2E3
SYK
C16orf71
ANKS3
CDC20
C12orf45
RAD9A
PARPBP
NUP37
MSH3
DHFR
TBC1D13
MAPK8IP3
LRRC37A3
STX4
FANCA
CEP55
SHQ1
GOSR2
CHRNB2
EIF2B2
THOC3
TTLL5
ERG28
STRIP1
RSL1D1
TMEM183A
SLC25A40
DBF4
SPTLC2
SPC25
INKA2
DDX20
NAA25
TCOF1
VANGL1
OTUD6B
MYNN
HARBI1
ATG13
KIFC1
ADAT1
CS
CDC25B
TMEM258
FEN1
DNA2
NHP2
SERINC3
MAX
TMEM120B
SLC35C2
ATG14
PUS1
LARP4
TASP1
RIOK1
CAGE1
TRIM45
NAP1L1
RPS23
ATP6AP1L
ETS2
MTRNR2L8
WDR74
KIF2C
ARMC2
WDR61
TBC1D15
EIF1AD
BANF1
IQCG
STAM2
LMLN
CLBA1
SEC22A
DENND2C
VPS33B
DEK
CRNKL1
CFAP61
DYNC1I2
ATP5MG
PRKAR1A
MLEC
KIAA1841
SLC27A3
LTO1
PREX1
EDEM3
DGKZ
SHCBP1
NBPF1
FANCM
REXO5
ERI2
RIDA
POP1
AZIN1
SPAG1
GNPNAT1
KLHL18
KIF9
WDR62
THAP8
TBRG4
LACTB
DNLZ
MNAT1
YTHDF1
PDCD2L
FANCE
WDR47
UMPS
CENPBD1
BRPF1
HSDL1
DNAAF1
NRAS
CLSPN
GNAI3
PIP4K2C
GMCL1
C8orf76
ZGPAT
ARFRP1
NEPRO
SLC35D2
ZNF492
STX16
NARS2
RPS29
CDK5RAP1
ATXN1L
TRAP1
LRR1
KIAA0895
ANLN
PPRC1
URM1
UBE2G2
MARS1
ARHGAP9
GOLGA5
ZNHIT1
PLOD3
FBXO33
FUBP3
CPLANE1
DPH1
DDX19A
NGRN
SPICE1
NDUFB2
THUMPD3
SLC35A2
MBTPS1
SLC35A3
DECR1
RASA2
SULF2
CPOX
SLC12A7
NCBP2AS2
NCBP2
C20orf27
E2F4
SLC27A2
RCN2
HSPA12A
ENO4
RASA4
TOMM40
CDK5RAP3
FRAT1
RRP1B
HSF2BP
ANGEL1
CBLL1
ZNF107
ADAR
CHFR
KATNIP
GTF3C1
IFT22
PPM1H
ZNF330
NTSR2
ZNF229
NPM1
YIF1A
SSBP2
RHNO1
FOXM1
SNAPC5
C14orf28
FAM234A
RBM48
PEX1
ZNF696
TCTN2
RCCD1
AUH
TMEM251
MOAP1
CTTN
CEP112
ADPRS
MRPL11
TXNL4A
SLC45A3
PCYT1A
RPS6KB2
RBFA
MIGA2
SPATA17
GPATCH2
GKAP1
CNPPD1
RETREG2
AXDND1
PDXDC1
DPY19L4
GLE1
RRM2B
FAM117B
IVNS1ABP
FAM210B
ARL6
HEATR1
HEXA
ENDOV
CDIPT
COQ2
SLC25A24
SF3B4
RAB35
CCND3
KLHL36
ZFAND3
CDC42SE1
MLLT11
VTI1B
SLC9A8
SBNO1
AGFG2
CFDP1
RMI2
RAB5B
PEX16
OCIAD2
PLK4
CCNB2
TADA2B
CCDC96
ASPM
TMEM150A
MRPL3
SYS1
PUF60
IFT57
COX10
METTL17
EDC4
CYP51A1
KIFAP3
ORAI2
NELFB
LRP10
CHCHD3
SART1
SAXO2
EFL1
RBM42
RTTN
POLN
HAUS3
MON1A
GSPT1
GDI2
NBEAL1
PRKCA
FAM219A
DNAI1
PXK
EML1
MPHOSPH10
MCEE
SKIV2L
NELFE
POLR2J2
VPS53
THAP10
LRRC49
TEX10
MRPL44
RNF19A
QSOX2
SNRPE
DDX42
CCDC47
HM13
SND1
CHCHD6
RPS27L
TCP11L2
U2SURP
EIPR1
HERC4
MIIP
CAPZA2
LDLRAD3
C5orf51
MXD1
METTL6
EAF1
MRPS21
STRADA
TEX2
USP8
FITM2
TTLL9
RPIA
NOL11
PPP1R12B
PABPC1
KPNA1
C11orf24
CLPTM1L
SUSD6
MED9
GARS1
CLIP1
DYRK1B
ZNF408
ARHGAP1
POFUT2
SPOP
NAA35
STX6
GPATCH2L
PSMD2
TAF6L
CHURC1-FNTB
CHURC1
TTC26
EEF1E1
TRAIP
SDAD1
INCENP
TAF3
ARL13B
EMC8
COX4I1
PMEL
CDK2
PIP4P1
NSFL1C
KIF3B
GPAA1
SPATA2L
PCLO
C10orf143
GATB
UBXN11
NDUFS3
KBTBD4
TDRKH
RPF2
CCDC90B
DNAAF2
KBTBD8
GPSM2
TRAPPC10
SUMO3
PPP4R3A
WASHC2C
DDX49
COPE
FAM185A
SLC35B1
ZC3H18
ZNHIT6
FAAP24
CEP89
DNAJC2
MCM3
SENP5
FAM228B
SF3B6
ESR2
PLEC
RASA1
ABRAXAS1
CGRRF1
CPQ
ODF2
POLR2J
MMUT
CENPQ
IARS1
PNPLA8
ERAL1
RPUSD1
CHTF18
DRG2
WBP2
CLASP2
CUL2
KIF6
LEMD3
COPB1
SPATA2
MMS22L
LYSMD2
EFHC1
SCRIB
LRRC46
PPM1G
WDR20
HSP90AA1
SETDB1
DENND4B
SLC22A15
PRPF8
NBPF12
TMEM214
MARVELD3
FDX2
ANAPC7
RECQL
GOLT1B
NOMO2
ZNF519
LCMT1
B3GAT3
ZNF148
RIOX2
GCN1
PCMTD2
FAM183A
NPHP3
STOM
POLE2
ZC3HC1
TMEM231
EBAG9
AKAP1
PSMC5
FTSJ3
ESRRA
SURF2
SURF1
TELO2
COX6A1
POLR3H
SUB1
NELFCD
ABL2
CEP135
MRPL27
EME1
DNAJC25-GNG10
DNAJC25
RAD51AP1