If a database is inadequate in terms of its description, unclear with respect to the terms of use, or is not downloadable, it may not be fully used, cited or rightly acknowledged by the (research) communities. This is even true for databases with high-quality datasets.
The Life Science Database Archive maintains and stores the datasets generated by life scientists in Japan in a long-term and stable state as national public goods. The Archive makes it easier for many people to search datasets by metadata (description of datasets) in a unified format, and to access and download the datasets with clear terms of use (see here for detailed descriptions).
In addition, the Archive provides datasets in forms friendly to different types of users in public and private institutions, and thereby supports further contribution of each research to life science.
| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |
|---|---|---|---|---|---|---|
| National Institute of Agrobiological Sciences open_in_new | Takuji Sasaki | EST | Rice |
The database of EST sites that were used to create the YAC-based rice transcript map.
|
CC BY-SA Detail |
|
| National Institute of Agrobiological Sciences open_in_new | Takuji Sasaki | DNA marker | Rice |
The database of RFLP markers that were used to create the year 2000 version of the high-density rice genetic map.
|
CC BY-SA Detail |
|
| National Institute of Advanced Industrial Science and Technology open_in_new | Michael Gromiha | Protein | Archaea, Bacteria, Eukaryota |
The database of transmembrane β-barrel proteins in complete genomes.
|
CC BY-SA Detail |
|
| National Institute of Agrobiological Sciences open_in_new | Takuji Sasaki | DNA marker | Rice |
The database of RFLP markers that were used to create the high-density rice genetic map.
|
CC BY-SA Detail |
|
| National Institute of Agrobiological Sciences open_in_new | Toshimasa Yamazaki | Protein Structure | Rice |
The database of protein 3D structures of seven kinds of plants such as rice.
|
CC BY-SA Detail |
|
| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |