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Life Science Database Archive
RGP estmap2001

Database Description

General information of database

info Database name RGP estmap2001
info Alternative name RGP : A YAC-Based Rice Transcript Map Containing 6591 EST Sites
info DOI 
info Creator 
Creator Name:
Jianzhong Wu
Creator Affiliation:
National Institute of Agrobiological Sciences
Creator Name:
Takashi Matsumoto
Creator Affiliation:
National Institute of Agrobiological Sciences
Creator Name:
Takuji Sasaki*
Creator Affiliation:
National Institute of Agrobiological Sciences
info Contact address 

2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
National Institute of Agrobiological Sciences
Takashi Matsumoto
E-mail : rgp_estmap2001_address
Yuichi Katayose
E-mail : rgp_estmap2001_address2

info Database classification Plant databases - Rice
info Database classification Genome
Sequence
info Organism 
Taxonomy Name:
Oryza sativa
Taxonomy ID:
info Database description 

This database provides the information about the YAC-based rice transcript map (Wu et al, Plant Cell 14, 2002), containing 6591 EST sites that was used for the map construction.

info Features and manner of utilization of database 

We provide the detailed contents of the YAC-based rice transcript map with the following tables and figures (together Microsoft Excel format and pdf format for your download). Tables contain the detailed results of PCR-based YAC screening with the clone-specific EST primers. Figures contain the rice genetic and YAC physical maps with the assigned EST sites.

Because this archive has been created based on the following data of the last update date, it may not match the data in the current situation.

info License CC BY-SA Detail
info Background and funding 
Name:
Phase 2 of Rice Genome Research Project (1998-2004)
info Reference(s) 
Article title:
A comprehensive rice transcript map containing 6591 expressed sequence tag sites.
Author name(s):
Wu J, Maehara T, Shimokawa T, Yamamoto S, Harada C, Takazaki Y, Ono N, Mukai Y, Koike K, Yazaki J, Fujii F, Shomura A, Ando T, Kono I, Waki K, Yamamoto K, Yano M, Matsumoto T, Sasaki T.
Journal:
The Plant Cell / 2002 Mar / 14(3):525-535
External Links:
 

Original website information

info Database maintenance site 

info URL of the original website (Suspended)http://rgp.dna.affrc.go.jp/E/publicdata/estmap2001/index.html
info Operation start date 2002/02/16
info Last update date 2002/02/16
info URL of the portal site 
info Whole data download -
info Referenced database 

MAFF_Rice cDNA Clone
DDBJ

info Entry list Available
info Query search Not available
info Web services Not available
info URL of Web services -
info Need for user registration Not available