ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4171357 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◣ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
CAT
YPEL3
ACYP2
PDE11A
FAAH
BAAT
FEM1C
AKAP10
FGD3
CYP17A1
ZNF562
DEFB124
C3orf14
FABP6
ZMYM5
NME2
TAS2R4
SLCO1B3
CEP85
VN1R2
ITGB3BP
EFCAB7
ZSCAN31
JAKMIP1
ACOX3
TRMT44
TMEM132A
EIF4E
KMT2A
SET
ARHGAP39
CDYL
BTNL2
CD47
PES1
TCN2
CLK4
THOC2
PARP14
SLC35G3
EHD2
FABP7
OTUD7A
GOLGA6L7
THOC5
ABCG1
RAP2B
ZNF117
ZNF280D
MLLT3
XKR7
PIAS3
ACTL8
CCDC185
IQSEC1
EID2B
SLC35G5
FAM25E
NOS3
PSMB2
PCOLCE
POLE4
ZNF561
ADORA2A
RTKN2
RABGAP1L
CD5
YWHAB
MRGPRX3
PPP1R12B
CYP4F11
CBX1
TMEM70
AKR1D1
SRPRB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SOGA3
DMAP1
ZNF609
MKRN3
NSFL1C
XPO1
TSKU
ZNF623
DCTN4
KAT6A
WIF1
LOC102724265
SMARCD2
ZNF426
KIF21B
CSRP2
MTF2
DRAP1
C11orf68
DISP1
DPYD
SIVA1
FRA10AC1
STX16
ORC4
MBD5
LUC7L2
FMC1-LUC7L2
NSMCE4A
FRMD3
PITPNM3
KRTAP19-2
TRIM32
ASTN2
DUSP6
FUT3
BARHL1
SPOCK1
KRT72
PIP4P2
NOD1
RNF130
CCDC88B
CRLF3
PLCH1
PGK1
SKP2
LMBRD2
MYORG
NPAS4
RNF207
TMEM41A
ZNF341
BRWD1
DPY19L4
ZNF114
SMU1
BTD
SLTM
EVI5
IFNB1
TEX19
EMC9
RABGAP1
ANKRD54
LHX4
SSB
RAB23
HDAC1
TCF4
AURKAIP1
HTR5A
ZBTB40
NFAT5
MOB4
GSTA4
CT45A10
QSOX2
BRMS1L
TOR1AIP1
N4BP2L2
MED23
FUT10
FRG1
SERPINA5
ZNF76
C5orf49
CDH10
RBBP5
CFAP92
HSPE1-MOB4
HSPE1
HSPD1
TLE7
SSBP1
SLC44A1
ZNF26
NEMF
MRPS31
ITGA4
ZNF326
CT45A7
CT45A6
CT45A5
NELFCD
ACTN2
C1orf54
DAB1
GTF2H2C_2
GTF2H2C
PKD1
DDX31
MYOM2
CCDC144A
ADNP
JMJD1C
REEP3
SERPINB1
LIG4
ABHD13
ACADM
LARGE1
INTS12
GSTCD
NUF2
NDUFS7
MRPL44
TTLL12
GTF3C5
ZKSCAN2
PRELID3A
RASEF
RPS7
FRMD4A
NCBP3
ANK1
CAMK1D
DSTYK
ANO5
SAMD4A
ZNF567
CT45A9
CT45A8
CT45A2
FAM136A
TMEM242
PTPRCAP
PDCL2
CCDC130
HSD17B12
DCP1A
DCAF10
MIER1
AP5B1
NAA35
AR
IL1R1
CPPED1
CLUL1
HLA-DPA1
RUNX2
PRAME
WDHD1
SOCS4
WDR11
ZCRB1
PPHLN1
FAM90A1
SLC39A3
COMMD4
SIN3B
TRMT1L
SWT1
EIF2D
REXO4
TRMT5
SLC38A6
UNC80
OR6C1
M1AP
UBE2O
AANAT
FER
NDFIP1
SFPQ
SNIP1
CFLAR
KDM4E
NUTF2
CENPT
ZNF362
RAB37
GTF3C3
CLTC
GLS
BTBD11
KDM3A
ZNF668
PTEN
KLLN
ZNF646
TRIP4
RDH16
RTTN
SCNN1G
ALDH3B1
PPP5C
GPR50
TC2N
DNAJC6
USP9Y
B4GALT7
SORD
LY6L
RGPD3
ELOVL2
RCOR3
ARHGEF12
DHRS4L2
ALG1L
RHEX
PEG3
ZIM2
USP30
MEMO1
VANGL1
ADAMTS3
ART1
FAM207A
NCAM2
COMMD2
CLTB
CCNG2
TMEM65
SUN5
HGC6.3
PRSS50
PUM1
C17orf75
VWA8
BSDC1
IQSEC3
MTRES1
RAD54L2
HYAL1
HSD11B2
FCGRT
PPIP5K2
GIN1
GTF2H2
JAKMIP2
SLC9B1
VANGL2
ABI2
FGF8
DUSP4
TACO1
PHF21A
MAP7
TLK2
PER3
NME1-NME2
NME1
HAO1
KDM5B
STAU1
BOLA2
BOLA2-SMG1P6
TTC26
TMA16
CLEC9A
PUS10
PEX13
TRAPPC5
YAP1
SPDYA
FAM160B1
NEGR1
RAP2C
AKAIN1
CDA
WNT16
BECN2
DRG2
SLC35A3
RSAD1
NEK7
NOXA1
CHRNB2
WDR43
KANSL1
KLHL11
PLCXD1
PSMF1
DUS1L
KIAA1549
LRRC37A3
SYT1
ARHGAP19
EYA1
BMS1
KDM3B
INAFM2
AGPAT3
COX16
TSC22D4
SF3A2
PLEKHJ1
BAG3
IST1
DACH1
ZC3H14
DDHD1
HOMER3
ZFP30
TMED1
CAPS2
NTSR2
SAMD13
NGLY1
ZPBP
CPXCR1
KMT2D
C2CD5
FOXJ3
WNT5A
EIF4A2
ZNF354C
BCAR3
KCNAB2
RSPO2
SF3A3
ATXN7L2
CALM1
ARHGEF2
COPS7B
ZNF605
CAPRIN1
CNOT6
ZC3H11A
NRG2
ASB14
PRUNE2
BSCL2
PIGQ
GNG3
TTC32
CALCRL
CCDC88A
FAM13A
PSMD11
SEMA3D
KAT6B
FTCDNL1
NCOA7
CHD1L
PRKAB2
TMEM68
TGS1
RAB12
TAPBPL
RNF213
SMG7
MLLT1
PPP6R1
INTS10
MPHOSPH6
ZMYM4
ZMPSTE24
SLC25A51
PDE4C
CSRNP1
TGIF1
BOLA3
CRYBG1
CCDC181
SLC24A1
INTS14
STAT3
ZCCHC8
C18orf25
CUTC
COX15
ACTL10
SIDT2
H1-6
UTP3
AP3S2
GARS1
SUZ12
EPS15
RANBP17
TP53I11
RAB38
IQCA1L
MNAT1
SUGCT
MPLKIP
RNF6
RPS20
CNKSR2
BAZ2B
ATF4
ULK2
GRK7
PXDNL
LAMA2
BRD1
HDAC2
METTL9
NBEA
MAB21L1
STYXL1
VPS13B
PCID2
CUL4A
TFE3
ANKAR
TCERG1L
RABGGTA
QRICH1
PLCL2
DNMT3A
BAG2
MLLT10
HSF5
CERS3
LAMB3
ZNF669
CLBA1
GABPA
ATP5PF
ZNF398
TMEM38A
SMIM7
C11orf52
CTAGE1
DNAJC25-GNG10
DNAJC25
CCDC97
ENOSF1
SLC25A31
FAM98B
POLDIP3
PHIP
SECISBP2L
PRKG2
RAB6A
OR2L13
SSBP2
ID4
RCOR1
LYZL2
RNF215
INO80D
TCF12
SLC39A13
CBR1
RPS14
TOMM20L
SCG3
NCAM1
CDC42SE2
ARFGEF2
SOWAHC
SEPTIN10
TEFM
KCNH1
FZD9
BOLL
COLEC11
ADRM1
ALG10B
POLR2J3
NECAP2
GPAM
CREM
OPRM1
DDHD2
ZFP64
LRFN3
OR51H1
HMGB1
USPL1
CENPV
CT45A3
PCDHB5
SAR1B
CEP41
ZNF639
CPSF1
TMEM229A
HDHD5
ZBTB6
LEMD2
RCAN1
TTLL1
CDK12
SEPSECS
INO80C
LRP6
PRELID3B
AGK
RTN1
STEAP2
EPHA10
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CACNG5
HES3
DNAJC21
RGPD5
RGPD8
KIF21A
ZNF808
KMT5B
GLG1
LTBP2
CBX3
HNRNPA2B1
TYMSOS
TYMS
VTA1
NMBR
AGGF1
WSCD2
LHCGR
ANKRD62
CFAP44
MYF6
TSEN15
ABCA3
HNRNPD
MAML3
SMG8
NBPF1
DNAJC11
SOCS5
DDX59
DPP6
CFAP298-TCP10L
CFAP298
SCAND1
CCAR2
DHRS13
VPS29
RAD9B
GOLGA3
VPS37D
CDC16
NTNG1
PAFAH2
TGFBR2
GTF2IRD2B
GTF2A2
RORA
GJB7
ADAMTS1
STX18
ZNF391
MAST2
FAM20B
STC1
ZCCHC4
ZNF846
POLR3G
MBLAC2
EXD1
CHP1
AMOTL1
OSBPL1A
SENP1
PFKM
NEUROD4
MTMR6
ZC3H6
UBE2D3
SLITRK1
HM13
CASP8
BMF
IL18R1
GADD45G
SELENOV
SELENOH
MKRN2
SYT7
LNPEP
JADE1
MARCHF11
PPP2R3A
CHRFAM7A
TM4SF19
TPR
ODR4
ATAD2
RABEP1
C1orf53
KCTD8
ADGRL3
GLUL
ZIC2
ZNF292
TIGD1
EIF4E2
FGD4
GTDC1
ZFP41
EFCAB13
PTPRK
KCNB1
CEP72
CLUAP1
RBL1
ING2
SLC29A3
WASHC1
TTI2
GEMIN5
MEX3C
RAVER2
CEBPD
KCNN3
COQ2
METTL8
DCAF17
ROBO3
HERC6
MANBA
PATZ1
KCNH5
VIRMA
LSG1
RWDD1
SPEF2
CALB1
NAA38
SULF1
DNAJC15
CHD3
NMS
PDCD4
CCDC166
TDRD12
POLR3B
MRPL48
CDC73
SNRPB2
GFI1B
MED4
TSC1
RPL26L1
NUCKS1
INTS9
HMBOX1
YPEL1
ZFAND6
CDC14C
ZNF829
ZNF568
CHMP7
FNTA
SLC39A11
SEC61A2
ARL11
ATF1
H3-3A
PARP8
RAB11FIP1
TPK1
DHX40
TUT7
ARID2
TSEN54
CASKIN2
RNF24
CEBPA
CTNNB1
ZER1
FXN
MYOCD
PRPF3
MEF2A
UIMC1
SPRED1
GAP43
PBK
TDRD9
RNF187
GDPGP1
CIB1
WDR47
FBXW4
LARP1
GCLC
PDGFD
YTHDF2
TBC1D13
SLCO4C1
MAP2
MARCHF6
TEAD1
B3GALT1
PRRC2B
VPS36
LRFN2
DAZL
GGN
FOXN3
TMEM63C
FAM234A
SAV1
GGACT
WBP4
ELF1
WDR74
PTPN4
USP3
DNMBP
NCOR1
STK31
MAPK1IP1L
ESCO1
HERC5
GTF2A1
PRDM4
SMC1B
RIBC2
CCDC59
SLC4A8
PPP2R2B
UBR5
KLF3
GTPBP3
NBN
NOTCH2NLC
SPAG9
SPECC1
ANO8
SMAD5
CLPB
PYROXD1
ATL1
VPS37A
CNOT7
IGSF11
CFAP91
PFN2
SLC12A5
CCDC178
TEX55
FUT9
KANSL3
KDM1A
CCNC
ATR
GNAL
SOX30
STON2
RBM12
CPNE1
BNIP1
OTUD7B
CDC7
EBPL
TEX22
KLHL20
TM7SF3
SKIDA1
CDS1
WIPF3
WDR24
C1GALT1
VPS16
PCED1A
KDF1
TATDN3
NSL1
ZNF518A
MARCHF7
BTRC
SEC24B
PLAGL1
CCDC50
UTS2B
SYCP2L
CTNNA1
RSF1
ZBTB37
CHRM3
GPR26
ANKRD36B
TNFRSF10D
ATL3
SCN9A
CDC42EP3
USP25
ATXN2
RBM46
FAM133B
TDP2
ACOT13
STEAP1B
RGPD6
GNG2
EIF1B
PATJ
PIGBOS1
PIGB
BRIX1
PLD4
ETFRF1
CFAP94
SUGT1
GPR37
TDRD5
CYREN
ARHGEF7
TMC7
SHCBP1L
BRPF1
PPIL4
TAF1B
ELL2
RIMBP3C
RIMBP3B
PRKAR1B
NPL
PAG1
BTC
KRTAP4-6
FAM83B
TAOK3
PGBD2
TRPC4AP
GOLIM4
ZNF43
SH3YL1
ACP1
SAP30
MAEL
BIRC6
SLC12A9
EPHB4
CAMLG
EXOSC6
CADM1
LPGAT1
RPL26
MTHFD2
SPR
ST3GAL6
KCNV2
ZBTB45
LINGO1
TMEM45A
SPTSSB
GALC
IMPA1
C10orf53
PVALEF
AATK
FOXR1
ISY1-RAB43
ISY1
ELAPOR2
DBF4B
PTGS2
TASOR
FANK1
SCYL3
ATP8A1
C7orf31
RGS6
PCDHGA3
TIPARP
MTMR10
N4BP3
DPP9
TOX4
RAB2B
SCMH1
RPS29
FZD1
IGFBP5
FDFT1
ELK4
NUDT8
GOLGA7B
HDGFL1
SYDE2
NOTCH2NLA
DUX4
UGCG
LCLAT1
PDE5A
PCDHGB4
ZMAT3
ST6GALNAC5
EPM2A
SRSF9
DYNLL1
ASPM
HERC1
TAF1L
MTRNR2L8
MTRNR2L2
YWHAQ
GBA
MAPRE2
SAMD4B
TBC1D19
PAXBP1