ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPS derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

CBX1
POU5F1
JMJD1C
REEP3
KLF14
TMEM216
SOX2
LUC7L2
FMC1-LUC7L2
ELOVL2
POU5F1B
CCDC130
C3orf14
RAB37
DHX40
TMEM43
CHCHD4
KCNJ15
RPL26L1
FANK1
SIVA1
GAGE2C
GAGE2B
GAGE2A
ATP1A1
FEM1C
RPS14
ITGB3BP
EFCAB7
MTF2
ENOSF1
PAQR9
NBPF1
FAM227B
DTWD1
RNF187
ANK1
SPDYA
USP30
RTTN
SERPINB1
ZFP30
BRWD1
PEX3
ADAT2
SPATC1L
TTLL12
HMGB1
USPL1
TRAF6
RAG1
CD47
DHRS7
SOX30
C5orf52
SAMD4B
TRDMT1
SLC11A2
AVPR1A
POTEH
ZKSCAN2
DCP1A
SLC39A6
POLR2J3
SDCBP
ANO5
ANKRD18B
ANKRD54
XKR6
EIF2S2
ZCCHC7
GMDS
GEMIN5
NEIL3
HUS1
CLGN
TMX4
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
NUF2
TMEM242
RAD54L2
NEK7
SLC10A7
BTBD10
RPAP2
GLMN
KAT6B
RIPPLY3
CAT
TMEM41A
CT45A10
DNM3
STX16
SLC44A1
MTRNR2L8
NEMF
MRPL40
HIRA
STX18
MIS18BP1
ZSWIM9
LIG1
ADAMTS20
C3orf80
KBTBD7
ZIK1
CNTLN
RNF38
ZNF562
ZMYM5
PPP2R2B
NUP54
PLCL2
HECTD1
EIF5A2
TASOR
CTNNB1
CRH
RFK
PRPF40A
ARL6IP6
NLGN4X
NSFL1C
PGBD2
C1orf53
WBP4
ELF1
BTG1
PRELID3B
ILRUN
PSMG1
PARP16
KLHL7
GPR150
YPEL3
YBEY
MCM3AP
AGBL3
USP35
KCTD21
RUNDC1
PTGES3L-AARSD1
PTGES3L
ZC3H12C
SULT1B1
MRPS31
SNRPB
CLTC
TARS3
AP1AR
FKBP9
TMEM229A
YTHDF3
OPRK1
LRP6
MARCHF7
HSPA2
FIGNL1
ACBD6
ADAM22
RIMS2
ZNF623
HLCS
KCTD3
WNT2B
AP3S2
ATL3
KANSL1
GAGE12G
GAGE12D
GAGE12E
GAGE12C
CLK4
RNF130
EPS8
CNTRL
C5
PPP1R9A
INPP5F
SLC25A53
GDAP1
PEX2
ZSWIM5
GLRB
AKR1E2
TNFRSF11B
COLEC10
C18orf21
CCDC50
UTS2B
KCNN2
TRMT5
SLC38A6
ZNF280D
RANBP2
SELENOT
ARHGEF12
LRRC8C
RPS29
MRPL48
FAM98B
ZNF518A
KBTBD3
AASDHPPT
CLOCK
CARS2
SVOPL
DSTYK
MRPL21
IGHMBP2
SMIM13
ZNF26
ATG10
PPP2CA
HACD3
POLE4
ALKBH3
MED4
SMAD5
DR1
RMDN2
VPS37A
CNOT7
ALG1
BOLA1
TMA16
BCKDHB
FBXO34
SLC39A8
PARP4
C15orf61
CERS6
REXO4
CCNI
NOTCH2NLC
P4HA1
MTHFS
DDX60L
PRKD3
SNIP1
CDYL
CTSC
C12orf73
SPATA7
P2RY1
EPM2A
GADD45A
TMOD3
NAPG
NOL12
ZNF25
XKR4
BTG3
ADIPOR1
HPS3
NELFCD
RAD23B
STBD1
SORCS1
INTS12
GSTCD
ZNF391
RNF6
RNF125
ZNF791
ZNF490
TAS2R4
CALM2
ELOVL1
THOC3
ACAT1
SSH2
ZC3H15
MRPS5
PIK3CA
WASHC1
RRAS2
SNRNP48
MFSD14A
SMARCAL1
CTXN2
SGIP1
OTOP1
MYEF2
EEF1AKMT2
UBE2D3
SAMD13
RSRC1
EIF4G2
DEPDC1
CPD
MTIF2
CPPED1
PXK
TYW1B
CLN5
TTLL7
STK17A
PCDHGC3
GPD2
ENAH
COMMD2
NFE2L2
PPP1R12A
ARNT
ACP6
E2F7
RUVBL1
MRPL42
PIK3R1
EEFSEC
RPS6
HERC4
PHF3
ORC2
SRSF12
STAG3
GPC2
DPY19L4
WDR74
WDFY1
TIGD6
HMGXB3
NDUFA6
ZSCAN32
ZNF174
SH3RF2
MBD4
IFT122
CRTAP
ANGEL2
ZNF518B
SF3A3
SMIM12
VAMP4
PCM1
L3HYPDH
JKAMP
DTD2
SMAP1
FOCAD
GPR155
STX17
HECW2
TRIM27
ZNF829
ZNF568
SLC35A3
MAPK1IP1L
ARL4A
MDM4
LIMS1
SS18
ARFGEF1
TACSTD2
ZSCAN25
ZC3H6
ZNF341
EIF3D
MTLN
CCDC71L
ZNF24
HACE1
HADH
CDC42SE2
CRHBP
COPS8
DKK1
GNAI1
ZNF544
C4orf36
PTGES2
HSPA1B
MED23
GTF2H2C_2
GTF2H2
NSA2
GFM2
PDCD6IP
TOMM20L
ADAR
UBQLN1
HDAC1
TYW3
CRYZ
FH
SVIP
JRKL
CCDC82
RBM15B
MPP5
LRRC7
COG6
TJP2
CHST14
SLC25A27
CYP39A1
HEATR5B
GPATCH11
RHEX
BSDC1
TTC32
RBBP9
TATDN3
NSL1
YTHDC2
SLC25A28
SEC61A2
CEP78
HDAC9
LIN7C
LGALSL
RIOX1
GTF3C3
RPS3A
SENP1
PFKM
ANKRD36
RNASEH2C
PDK1
NAP1L1
DEPTOR
COX18
CRNKL1
CFAP61
MRPL17
NEK9
ZNF354C
SMIM10L1
PRH1-TAS2R14
SLC16A1
TBC1D31
RPN2
NT5E
MROH8
TRERF1
ZFP2
SETD5
HSPA1L
HSPA1A
COG2
AGK
SPRYD7
NOL7
AKAP9
ZNF454
HTR5A
DRG2
DUS1L
GNAL
GOT2
SYT1
SLC35B4
ZSCAN5A
PAG1
FBXL5
ZNF485
KANSL3
NOTCH2NLA
MTMR9
G3BP2
PRDX6
DDX25
FN1
PPP1R8
MPHOSPH10
MCEE
PPP5D1
CALM3
MAGEF1
HECTD2
MYNN
AATF
PTPDC1
RNF138
POLR3D
FNBP1L
PGAP4
ADGRG6
ARHGAP39
SLC45A4
RAD52
HERC3
PYURF
PIGY
ELF2
ELAPOR2
PCNA
ABHD5
ITM2B
TMEM185B
PTGER3
LRRC75A
DUX4
ATR
PSMA1
DPP8
PPIL1
DNAH7
EGLN1
BTBD1
NCAM1
BTF3
PDE3B
RNF32
SYT16
NID2
FRA10AC1
MRPL44
KMT2A
MTBP
MRPL13
KLHL20
AASDH
POLR1F
DCP1B
TMEM106B
SRSF11
PKD2L2
NTSR2
CC2D2B
CTHRC1
GGA1
LRRD1
CCDC138
RHBDD1
THUMPD1
ATP5F1E
CFAP206
EDNRB
EXOC6B
NRG3
HMGCLL1
GRIA4
UGT8
CLVS2
DPF2
FAM114A1
CXCL6
TRPA1
FAM160B1
B4GALT7
MEMO1
ZNF670
RPL6
CYP51A1
UBE2Q1
SEC24B
PTPN11
GABPB1
FAM161B
COQ6
IMPACT
SMC3
GTF2E2
CBR3
TTC12
CCDC59
CCDC88A
RPL5
SLC25A32
DCAF13
ANTXR2
ANKRD36C
BTRC
ZFYVE9
TMEM267
RAB3IP
MRPS30
SYS1
SLC36A1
GMFB
SLC38A1
STXBP5L
STRN3
AP4S1
ADRB1
DIPK2A
P3H1
B3GALNT1
ZNF32
GAGE12H
EXOC2
SEC31A
TRAM2
THAP9
ZBTB6
NOC3L
AMZ2
BBS5
SLC35F5
ZNF594
ISCA1
FAM185A
MRS2
RALGAPA1
DNAH14
ERV3-1-ZNF117
ERV3-1
MINDY2
EIF3A
NUP58
SLC46A3
PLPPR5
CAVIN3
SLC26A4
ELP1
ABITRAM
AGPS
FANCF
CCDC112
WASHC4
EIF2D
MAN2C1
ABCA3
CGGBP1
ZFP91
SLAIN2
LUC7L3
SUCLG2
ZNF654
ZNF229
MED17
OR10AC1
HORMAD2
SLC24A1
INTS14
BMS1
DDX1
HDAC2
METTL9
FER
TMEM65
PPP1R12B
ATP6V0D1
GPR37
C3orf33
STAMBPL1
CCPG1
C15orf65
USP47
AGL
CHSY3
KBTBD6
MGA
PTPN1
NSMAF
ALMS1
PXYLP1
ENOX1
RPP25
SEMA6D
ARPP21
ARHGAP31
SVEP1
TCF25
MB21D2
PDE11A
MTR
TGFBR2
PDGFD
CFAP20
TVP23B
TATDN1
NDUFB9
MINPP1
TOE1
MUTYH
ZC3H14
TP53BP2
ICE2
ERMP1
PPP2R5A
CAPN7
ARFGAP3
TRIM44
PTDSS1
MTERF3
PTBP3
INSIG1
KLF11
HSPE1-MOB4
HSPE1
HSPD1
KCNH1
WDR47
CCDC126
GPR180
EFCAB13
JAK2
PEX7
PLPP1
UGP2
GUCY1A2
ZNF655
LY75-CD302
LY75
SELENOH
ADNP
NMRAL1
HMOX2
SPECC1
NLE1
MRGPRX3
CYP2R1
NFYC
NXPE3
MTARC2
SIGMAR1
CCDC149
FZD6
PLD1
MOXD1
PAXBP1
TSEN15
SDHAF3
EPHA3
TTC14
ZCWPW2
AZI2
DYNLRB2
TTC37
ARSK
PROS1
ERI1
TFAM
FAN1
ALG9
IFNAR1
CNIH1
MTMR2
MANF
C2orf69
PRKACB
EIF3B
KDR
RICTOR
FAM174A
CTBS
KTI12
NKIRAS1
PIFO
SNCA
CHMP2B
PLSCR1
PCLO
LRRCC1
SNX9
PRDM5
NASP
FANCA
NR1D2
DNER
TBC1D7-LOC100130357
TBC1D7
ATP7B
ALG11
B3GALT1
FBLL1
CGAS
SOWAHC
FAM237B
QRFPR
DEPDC7
TRPC3
DNAJC25-GNG10
DNAJC25
KMT2D
MRPL58
PSMD14
PDE4D
STARD4
RMI1
HNRNPK
C11orf97
TMEM30B
KIFBP
HSD17B12
CDC27
NCAPG
HSPA5
CFAP91
TRIP4
MRPL39
INTS2
TRAM1
POMZP3
SPNS1
ZNF621
INO80D
PPT1
GHITM
DIDO1
GID8
ITGB8
MYBL1
TMEM251
MOAP1
ZNF443
PHLPP1
TMEM200A
SAMD3
MOV10
GRB14
WDR11
APRT
TPR
ODR4
PKM
GPC6
PLK4
RDH14
FBXO7
GINM1
PHF10
HDDC2
NTAN1
SCYL2
DEPDC4
MDFIC
TPBG
DIRAS2
LIFR
NEFL
ST6GAL2
TOR1AIP1
PPIG
FAM133B
UBOX5
FASTKD5
NEK4
POC1B-GALNT4
GAPVD1
PRICKLE1
HNRNPF
PGGT1B
ZNF354B
UBA5
ACAD11
RMDN1
CEBPB
CPNE3
RRS1
APP
TRIM36
RPL37
OTUD7A
RINT1
CLPB
STEAP1B
SEMA6A
FUT8
POLR2M
SLC25A40
DBF4
ACSL1
BAG2
FNDC3A
MOB3B
LCMT2
ADAL
FBXL20
HDHD5
PPIC
CNRIP1
GALNT3
SEC31B
SNX21
TTI2
NBN
MAGOH
ASNS
SMIM8
THSD7A
STAT1
SLC35A1
USP53
CPE
RPS4X
TBC1D9
BORCS5
SRD5A3
GAREM1
IFRD1
DDX59
PCMTD2
PPP3CA
FZD9
RAD51
ZNF800
TAB2
EPSTI1
ERICH6
HYLS1
LACC1
CCDC122
LSM5
DROSHA
C5orf22
OTUD7B
PMS1
ORMDL1
H2BC18
SLC25A38
ASCC3
ATL1
MTHFD2
PCYOX1
NDUFA10
ZNF860
OSBPL10
ANKRD18A
SHLD2
GLUD1
AVL9
RHOB
TRPC4
FBXO22
MAPK14
ZFPM2
TSEN54
SFT2D2
CASKIN2
FAM200B
MAD2L1
TESMIN
ZNF473
VRK3
KLHDC1
CD302
ZNF287
PCOLCE2
SPAG6
RBM28
PIGBOS1
PIGB
DLC1
TBC1D13
SPATA18
CBR1
ETNK1
TTLL4
TRIM59
MAP3K2
PSTK
TMEM254
FAM47E
RTKN2
KAT2B
NREP
ZDHHC21
TBC1D30
INO80
RPAP3
FAM47E-STBD1
PHKB
ITFG1
KBTBD8
MEGF10
PFN2
SND1
GNS
TGFBRAP1
TMEM217
TBC1D22B
RGS7
RIMKLA
HDGFL1
NPBWR1
CDC73
ZBTB45
UGGT1
HNRNPD
ARL6IP1
IQCH
AAGAB
ATAD5
RNF126
HAUS4
CAAP1
NPL
HERC5
DPYSL3
ZNF624
ZNF607
SREK1
E2F6
ZNF367
MACIR
AVPI1
CNTNAP3B
UBE2V2
FHIT
SGMS2