ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2059876 | BJAB
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◣ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
YWHAQ
CENPV
SAMD4B
MTRNR2L8
RBBP9
MTRNR2L2
FEM1C
ZNF117
NSFL1C
YPEL3
CEP72
MEMO1
TTC32
RABGAP1
NLRC4
RPS29
LSG1
APRT
ZFP30
KMT2A
SUPT7L
SLC4A1AP
TMEM130
PSMF1
ITGB3BP
EFCAB7
SEC23B
SLC25A51
CCDC88A
POLR2J3
NARS1
CCDC130
PGBD2
DEFB124
RCOR3
REM1
MAD1L1
PUM1
LUC7L2
FMC1-LUC7L2
FMC1
ZNF3
RPS7
FAM160B1
ACTL8
GSPT1
KDM3A
TMEM43
CHCHD4
RPL27
BRWD1
HEXD
TOR1AIP1
ARMH3
MTF2
GBA
MAN2A1
SRXN1
EIF4A2
NUF2
ZNF562
PAXBP1
ATAD2
LOC101928841
PRKAR1B
TBC1D22A
RPS14
HUS1
SLC24A1
INTS14
FAM133B
RTTN
LZTR1
WDR43
ABCB4
CYP51A1
MRPL40
HIRA
INTS12
GSTCD
HNRNPA1L2
VPS13B
MAML1
RERE
SLC30A6
YME1L1
MTBP
MRPL13
PET117
KAT14
PMFBP1
SPAST
MED4
RASSF2
NPAS4
PPIP5K2
GIN1
MRPL19
CBX1
GTF2H2C_2
GTF2H2
NDUFA4
BIN2
AURKAIP1
SNRPB2
EIF1AD
BANF1
SSBP1
FRA10AC1
MKNK1
SMIM13
MTIF2
NBN
CCDC59
SNAP47
JMJD4
TMEM65
EPRS1
KDM1A
TRMT2A
RANBP1
SLC33A1
ATR
NUDCD3
GTF2H4
FAM98A
RCBTB2
SELENOH
SPHK2
RPL18
RB1
MRPL44
DCP1A
UFD1
CDC45
SRRT
COMMD2
SNAP29
PI4KA
CHD1L
PRKAB2
PTCD1
CPSF4
HM13
NCBP3
SF3B6
FAM228B
CRKL
COA6
ADAM22
SNRPB
WDR55
STX18
RPS15
SUGT1
CCDC150
PTPRCAP
RINT1
HMGB1
USPL1
TGDS
PPP1CC
HK1
TSPAN10
NPLOC4
TBC1D19
NOTCH1
NUP54
DRAP1
C11orf68
LRRC37A3
DOK4
IL21R
NBPF1
DCT
TOX4
RAB2B
LRP6
HIBADH
TIPARP
DPY19L4
WDFY1
HSPE1-MOB4
HSPE1
HSPD1
PSMG1
OPA1
CFAP36
SUGCT
MPLKIP
UBB
BCL2L1
ZCCHC4
YIPF4
NDUFS7
CLTC
SDHAF3
SPRYD7
NME1-NME2
NME1
KANSL3
ZMPSTE24
CLUL1
AP1G1
SLC9A3R1
CCDC97
GFI1B
TSC1
GAPVD1
IBA57
NAPEPLD
ANKEF1
TSC22D4
ATXN2
FAM98B
CRNKL1
CFAP61
NDUFB3
FAM126B
MCM7
AP4M1
TRIP4
ZNF408
ARHGAP1
TBC1D13
SLC41A3
RTN4R
HARS2
HARS1
PPP5D1
CALM3
DYNC1LI2
ZNF292
DCAF10
COPS7B
RABGGTA
ZZEF1
CYB5D2
SLC29A2
PRPSAP1
MICU2
RPL37
GCFC2
DCXR
PIH1D2
NKAPD1
TMEM191C
NUDT15
ZNF25
PCYT1A
TRIP12
FBXO36
NOTCH2NLC
MCUR1
PEX3
ADAT2
DDX1
RNF6
LDB3
NOTCH2NLA
IPO4
TBCD
TRMT61B
FZD1
ZNF891
ZNF10
FAM227B
DTWD1
POLR3B
SEC22B
GALK2
RUVBL1
COPS2
EEFSEC
SYPL1
BCAP29
TTLL12
TTLL1
SLC7A11
EDC4
CCDC71L
ZCWPW2
AZI2
CBLL1
RABGAP1L
MRPL48
ARL11
RBBP5
REXO4
MRPS18C
HELQ
DCTN4
GTF2H2C
NCOA1
ZNF341
ZSCAN26
GNB2
NSMCE4A
CCNG2
ALG10B
UBE3B
UBE2L3
TRAF6
RAG1
FBXL13
ARMC10
ARHGAP45
RAD54L2
C8orf37
C2CD4C
FAM170B
WWOX
MS4A1
CCNI
SRRM3
SEPTIN7
NCF2
MOB4
DHTKD1
LANCL2
FBXO11
UCHL5
RO60
KDM5C
BIRC6
RGPD1
RGPD2
ING2
EMC8
COX4I1
ATXN7L2
MIA3
IST1
DSTYK
TFPT
PRPF31
TVP23B
KDM3B
EIF3E
AP5S1
TSEN15
PCBP2
TNFAIP8L1
MRPL58
CRLS1
H3-3A
CALM2
ZMIZ2
INO80B
NAA35
DRG2
VTA1
NMBR
UIMC1
ZNF572
MRPS23
ZER1
VRK2
DESI2
ZNF436
IFT22
TRUB2
COQ4
ZSCAN25
ZC3H6
REEP2
TENT4B
RPS26
NMNAT1
LZIC
RBL1
GOLGA3
VPS50
HEPACAM2
UBE2D2
TRA2A
INO80C
MITD1
LARS2
UBOX5
FASTKD5
BLOC1S6
MNAT1
WDR36
ZCCHC8
INTS5
TFR2
PRKRIP1
RNF139
STXBP2
PUS10
PEX13
ETF1
TMEM230
PLCB2
UGCG
FAM118A
GARS1
SAYSD1
C18orf21
NCKAP1L
TRAM2
SOCS5
LOC100289561
SYT7
SPINT2
DOCK2
RPS20
DNAJB12
AARS2
DUS1L
UNC50
COA5
PSEN2