ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2059876 | BJAB
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◣ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
YWHAQ
CENPV
SAMD4B
MTRNR2L8
RBBP9
MTRNR2L2
FEM1C
ZNF117
NSFL1C
YPEL3
CEP72
MEMO1
TTC32
RABGAP1
NLRC4
RPS29
LSG1
APRT
ZFP30
KMT2A
SUPT7L
SLC4A1AP
TMEM130
PSMF1
ITGB3BP
EFCAB7
SEC23B
SLC25A51
CCDC88A
POLR2J3
NARS1
CCDC130
PGBD2
DEFB124
RCOR3
REM1
MAD1L1
PUM1
LUC7L2
FMC1-LUC7L2
FMC1
ZNF3
RPS7
FAM160B1
ACTL8
GSPT1
KDM3A
TMEM43
CHCHD4
RPL27
BRWD1
HEXD
TOR1AIP1
ARMH3
MTF2
GBA
MAN2A1
SRXN1
EIF4A2
NUF2
ZNF562
PAXBP1
ATAD2
LOC101928841
PRKAR1B
TBC1D22A
RPS14
HUS1
SLC24A1
INTS14
FAM133B
RTTN
LZTR1
WDR43
ABCB4
CYP51A1
MRPL40
HIRA
INTS12
GSTCD
HNRNPA1L2
VPS13B
MAML1
RERE
SLC30A6
YME1L1
MTBP
MRPL13
PET117
KAT14
PMFBP1
SPAST
MED4
RASSF2
NPAS4
PPIP5K2
GIN1
MRPL19
CBX1
GTF2H2C_2
GTF2H2
NDUFA4
BIN2
AURKAIP1
SNRPB2
EIF1AD
BANF1
SSBP1
FRA10AC1
MKNK1
SMIM13
MTIF2
NBN
CCDC59
SNAP47
JMJD4
TMEM65
EPRS1
KDM1A
TRMT2A
RANBP1
SLC33A1
ATR
NUDCD3
GTF2H4
FAM98A
RCBTB2
SELENOH
SPHK2
RPL18
RB1
MRPL44
DCP1A
UFD1
CDC45
SRRT
COMMD2
SNAP29
PI4KA
CHD1L
PRKAB2
PTCD1
CPSF4
HM13
NCBP3
SF3B6
FAM228B
CRKL
COA6
ADAM22
SNRPB
WDR55
STX18
RPS15
SUGT1
CCDC150
PTPRCAP
RINT1
HMGB1
USPL1
TGDS
PPP1CC
HK1
TSPAN10
NPLOC4
TBC1D19
NOTCH1
NUP54
DRAP1
C11orf68
LRRC37A3
DOK4
IL21R
NBPF1
DCT
TOX4
RAB2B
LRP6
HIBADH
TIPARP
DPY19L4
WDFY1
HSPE1-MOB4
HSPE1
HSPD1
PSMG1
OPA1
CFAP36
SUGCT
MPLKIP
UBB
BCL2L1
ZCCHC4
YIPF4
NDUFS7
CLTC
SDHAF3
SPRYD7
NME1-NME2
NME1
KANSL3
ZMPSTE24
CLUL1
AP1G1
SLC9A3R1
CCDC97
GFI1B
TSC1
GAPVD1
IBA57
NAPEPLD
ANKEF1
TSC22D4
ATXN2
FAM98B
CRNKL1
CFAP61
NDUFB3
FAM126B
MCM7
AP4M1
TRIP4
ZNF408
ARHGAP1
TBC1D13
SLC41A3
RTN4R
HARS2
HARS1
PPP5D1
CALM3
DYNC1LI2
ZNF292
DCAF10
COPS7B
RABGGTA
ZZEF1
CYB5D2
SLC29A2
PRPSAP1
MICU2
RPL37
GCFC2
DCXR
PIH1D2
NKAPD1
TMEM191C
NUDT15
ZNF25
PCYT1A
TRIP12
FBXO36
NOTCH2NLC
MCUR1
PEX3
ADAT2
DDX1
RNF6
LDB3
NOTCH2NLA
IPO4
TBCD
TRMT61B
FZD1
ZNF891
ZNF10
FAM227B
DTWD1
POLR3B
SEC22B
GALK2
RUVBL1
COPS2
EEFSEC
SYPL1
BCAP29
TTLL12
TTLL1
SLC7A11
EDC4
CCDC71L
ZCWPW2
AZI2
CBLL1
RABGAP1L
MRPL48
ARL11
RBBP5
REXO4
MRPS18C
HELQ
DCTN4
GTF2H2C
NCOA1
ZNF341
ZSCAN26
GNB2
NSMCE4A
CCNG2
ALG10B
UBE3B
UBE2L3
TRAF6
RAG1
FBXL13
ARMC10
ARHGAP45
RAD54L2
C8orf37
C2CD4C
FAM170B
WWOX
MS4A1
CCNI
SRRM3
SEPTIN7
NCF2
MOB4
DHTKD1
LANCL2
FBXO11
UCHL5
RO60
KDM5C
BIRC6
RGPD1
RGPD2
ING2
EMC8
COX4I1
ATXN7L2
MIA3
IST1
DSTYK
TFPT
PRPF31
TVP23B
KDM3B
EIF3E
AP5S1
TSEN15
PCBP2
TNFAIP8L1
MRPL58
CRLS1
H3-3A
CALM2
ZMIZ2
INO80B
NAA35
DRG2
VTA1
NMBR
UIMC1
ZNF572
MRPS23
ZER1
VRK2
DESI2
ZNF436
IFT22
TRUB2
COQ4
ZSCAN25
ZC3H6
REEP2
TENT4B
RPS26
NMNAT1
LZIC
RBL1
GOLGA3
VPS50
HEPACAM2
UBE2D2
TRA2A
INO80C
MITD1
LARS2
UBOX5
FASTKD5
BLOC1S6
MNAT1
WDR36
ZCCHC8
INTS5
TFR2
PRKRIP1
RNF139
STXBP2
PUS10
PEX13
ETF1
TMEM230
PLCB2
UGCG
FAM118A
GARS1
SAYSD1
C18orf21
NCKAP1L
TRAM2
SOCS5
LOC100289561
SYT7
SPINT2
DOCK2
RPS20
DNAJB12
AARS2
DUS1L
UNC50
COA5
PSEN2
TCTEX1D2
TMEM41A
SNIP1
NOP16
HIGD2A
CDK12
DHRS12
PHIP
MRPL42
NIP7
COG8
NUDT7
IRF5
N6AMT1
NEDD9
SELENOI
ADGRF3
TRRAP
MRPS26
KIZ
PDGFD
MRPL38
BRF2
CLK4
CAB39L
SLC35A1
ABHD12
SETDB2
STX16
SECISBP2L
ANGEL1
USP32
ZNF789
MRPL1
B4GALT7
ING3
BANK1
CNEP1R1
GPR180
GABPB2
MRPL3
ITGA4
CDC25C
FAM53C
CCS
CCDC87
COMMD1
COPS8
ZNF337
SLC35F5
ACBD6
RABIF
PBRM1
HS1BP3
GNL3
KPNA3
SFSWAP
PLK3
RBM28
ADSS2
ORC5
POLE4
SRP9
RRBP1
SLC26A11
SGSH
KRR1
NDUFAF1
FPR1
TMEM101
SCAND1
PKM
CYLD
NFAT5
RNASEH2C
DPP9
IDH3B
THAP7
PTPRA
SLC39A13
TAF3
RTN4
TNPO3
ANKRD36
SCP2
FER
USP15
ABCB10
PAK2
POLR1F
ARL14EP
ASNS
KATNBL1
POR
EIF2D
RAD52
SMIM26
C1GALT1
GABPB1
NT5C3A
TEFM
CUL2
ZC3H13
CDCA7L
LSM5
WDR70
CFAP20
TUT1
EIF2B3
CCNL1
MGST3
TMEM168
DPY30
CEP120
PRMT5
FBXO22
HCFC2
GLT8D2
FAM110A
MMP26
COX7A2
SMAD5
VPS4A
CEP57
MTX2
RAB3IP
FAM76B
SPATC1L
ASPSCR1
PAFAH2
RMND1
ARMT1
SF3A3
DDX18
CYB561D1
LONP2
ABCC11
COA1
HAX1
UGGT1
SEM1
ZNF22
SMURF2
KIAA0895
THAP11
ANLN
STRN
DNAJC27
WWC1
NAA20
ANTKMT
ZMYND15
CXCL16
ZNF770
FAM234A
VPS72
CAB39
KMT2E
SKIL
CLK3
PSMG3
AKAP10
RBCK1
SGK3
ITGB4
SLTM
ZNF335
SCO1
ADPRM
TTC27
STAT3
TARS3
PURA
DTX2
TTC4
RPS6
TEX261
SLX4IP
TLN1
CREB3
CAPRIN2
TSC22D2
ALG10
METTL9
NOXA1
TIMM10
ATRN
CCDC57
GPER1
MBTPS1
TMEM68
TGS1
COG2
RNF24
ISY1-RAB43
ISY1
CALM1
MCCC1
HPCAL1
MRPL39
WDR53
FBXO45
ZNF557
PIK3R5
KIAA0319
DOCK8
C7orf31
IL17RA
ANKRD40
NDUFA6
PCTP
POLR2J
TMEM39B
SEC14L1
DAG1
POLR1D
LNX2
DMAP1
CAMK1D
C1orf53
CTDP1
RELA
TMEM222
METTL26
ZNF23
RSRC1
OR2L13
HERC4
SIRT1
DTNBP1
TIMM9
KIAA0586
LCOR
CFAP298-TCP10L
CFAP298
QRICH1
BCL2L13
INAFM2
CCZ1B
WDFY2
CIPC
TDP2
ACOT13
DDX46
ADNP
FOXJ3
TMEM106B
LNPK
ERCC1
C10orf88
RNF216
POLR2C
ARSG
SMG8
WDR5B
GGA1
ZNF570
ZNF569
ZNF609
RBSN
FAM217B
WASHC2A
PPP1R3D
CCPG1
C15orf65
PSMD12
NR3C1
DDX5
PIGO
UBA5
ACAD11
CCNA2
PRPF18
TTC14
SNAPC3
WDHD1
SOCS4
INSIG2
AVL9
CBX8
RSAD1
TTC21B
STARD4
GTF2IRD2B
SDE2
CSRNP3
CHMP1B
TFB2M
RASSF6
CNST
DNAJC30
BUD23
ZBTB45
DGKZ
RHOG
MLST8
TPX2
CYBC1
NR1H3
ACP2
RALBP1
STK35
CLPTM1
GMPS
STX8
CFAP52
PGS1
TSGA10
C2orf15
PRSS27
CDC73
HEATR1
DHRS13
TMEM167B
PPIL4
TLR4
ABLIM1
TRNAU1AP
EFCAB2
YAE1
WDR17
CRY2
MTMR6
APEH
LIMS1
TERF2
LRRC58
NR1H2
CCDC77
WASL
MED14
KDM5A
DENND4B
LGALS9C
TATDN3
NSL1
ABCA3
MRPL16
GFM1
EIF2B5
QSOX2
OCEL1
COPS4
MTOR
SRCAP
LOC730183
TAF1B
RAB4B
ADRM1
ZSCAN12
AQR
ITGB1BP1
CPSF3
UBE2Z
CDC25B
TRMT6
MCM8
CENPB
ATP5MC3
RHOT2
IPO13
TJP3
CLTCL1
ARMC8
NAMPT
DUSP6
SCNM1
LYSMD1
PARL
MAP9
TRIB3
TASP1
TPR
ODR4
ELOVL1
PDCD6
HEATR5A
TACO1
CREM
KRAS
PUM3
PLEKHG4
THAP6
OST4
NOS3
ANKRD36B
FNDC3A
LSM2
CLN6
HNRNPA0
SPECC1
TATDN1
NDUFB9
BUD13
WDPCP
MDH1
QSOX1
RIT1
AMN1
C7orf26
USP42
CTNNB1
PDAP1
BUD31
SNRPD3
GUCD1
RPL29
LYPLAL1
KPNA4
PPCDC
GAA
CASTOR2
PPP1R35
SOD2
WTAP
RAD51AP1
C12orf4
TAB1
GOSR2
SPNS1
TACC1
ASPHD2
NSUN5
GDI1
INTS6
TMBIM4
ITGAL
WDR11
CDK5RAP1
INKA2
DDX20
IQCH
AAGAB
XKR8
YKT6
DEGS1
AP3S2
SPATA5
NUDT6
ATP8A1
SLC25A32
DCAF13
LAMP1
CAPRIN1
EGR1
RNF103-CHMP3
RMND5A
PIGW
MYO19
GCLC
MRPS33
HIF1AN
RBM25
ANKRD50
PCBD2
ATAD2B
SNX16
MON1B
BRAT1
GTPBP10
NOL11
RAB11FIP2
THUMPD2
RAD21L1
SMG7
SEC31A
THAP9
ZNF180
MRPL21
IGHMBP2
CCDC174
NOTCH2NLB
CDK1
GTPBP8
PGBD1
GPCPD1
GSTM4
BLOC1S5
DMTF1
UMAD1
ZFAND3
FRG1
GOT2
RPL26L1
GINS3
PPP4R3B
CDC42EP3
APMAP
TNFSF10
NDUFS3
KBTBD4
UBE2D3
TMEM18
CENPN
BUB1B
KIF16B
CISD2
ADPRHL1
GTF3C5
VIRMA
SACM1L
TMEM70
CLDND1
MACC1
CCNC
SNX17
EIF2B4
DNAJC11
RPL38
ZNF233
TXNDC15
PIAS4
PCMTD2
UBXN2B
LZTS3
PRND
SUCLA2
DUS4L-BCAP29
DUS4L
COG5
GPAM
MDC1
OTUD7B
ELMO1
CHD8
FBXO42
ZDHHC4
VPS13D
ZNF621
TRMU
PCNA
CDS2
PHF11
PIGBOS1
PIGB
ZNF354A
PDE12
ELAPOR2
POLE3
C9orf43
VMP1
PTRH2
PTPN12
RPTOR
SLC26A4
VARS1
SPRYD4
DGKD
CCL4L2
CCL4
POLR2B
NOA1
CCAR2
CBWD5
CBWD3
CBWD6
UBQLN1
MRPL12
BORCS5
PKN2
NAE1
FRMD6
PLK1
AMBRA1
PHOSPHO2
CCDC173
MRPL33
EIF3B
NRROS
EIF2S2
NEDD1
XXYLT1
CBX3
HNRNPA2B1
RBM48
PEX1
KIF22
USP8
DPY19L1
DGCR6L
ITFG2
ZNF48
VPS26C
LRRC34
SIRPB1