ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065547 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◣ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
ITGB3BP
EFCAB7
YPEL3
MAPRE2
MTRNR2L8
PDE11A
RABGAP1
ZNF829
ZNF568
ZFP30
RABGAP1L
SAMD4B
RBBP5
ZNF623
YWHAQ
STC1
SF3A3
MTF2
DUSP6
TTI2
NUF2
SSBP1
MTRNR2L2
DISP1
CBX1
MTR
ARHGAP39
TMEM132A
COX16
AURKAIP1
ZNF117
CALCRL
RBBP9
CDK19
AMD1
SLC33A1
RPS29
RERE
CAT
DNAJC25-GNG10
DNAJC25
UTP3
DNAJB12
FAM234A
GBA
RNF187
HLA-E
RCAN1
MYO1H
TBC1D19
CFAP298-TCP10L
CFAP298
TTC32
ATP5MC2
RPL37
JMJD1C
PAXBP1
MMACHC
CCDC163
TRAPPC8
CFHR4
GTF2H4
ZSCAN22
ALG14
ELAVL2
ISY1-RAB43
ISY1
TMEM242
TFPT
PRPF31
C3orf14
RAB30
PEX3
ADAT2
WDR11
MED23
COX7A2
ZMPSTE24
CEP85L
TMEM259
NEMF
GABPB2
ZNF134
TRMT11
GRPEL2
SUPT7L
SLC4A1AP
MITD1
SLC45A4
SULT1C4
FAM13A
UFC1
PPP1R11
COA6
RNF125
NUP107
NOS3
ZNF391
GLIPR1L2
SAR1B
TATDN3
NSL1
PCDH15
HEATR1
RPS7
DCP1A
ILF2
FABP6
KDM3A
CCDC59
MNAT1
PPRC1
CEP85
REXO4
CCDC120
TRMT5
SLC38A6
SNRPD3
GUCD1
TBL1X
GTPBP3
EIF2S1
ATP6V1D
OSGEPL1
NME1-NME2
NME1
PDCD6IP
TRIP4
TEFM
TACO1
BRF2
ZNF165
CDC5L
EIF3F
ATG5
DMAP1
PNMA2
RCAN2
DSTYK
MOB4
NDUFS7
SKP2
LMBRD2
RPS13
SLC25A53
EIF2D
PAFAH2
ATF7IP
NDUFB3
FAM126B
LOC102724265
UBR2
CPPED1
ZNF571
ZNF540
NEK7
POLR3B
GSTA4
CLTB
TTC26
NOP16
HIGD2A
ZNF561
SNRPE
LUC7L2
FMC1-LUC7L2
FMC1
NAT10
REEP3
HDAC2
MAN2A1
ZNHIT6
ZNF292
TPK1
AASDH
SYT1
PDE1A
CCDC107
IARS1
TMEM41A
CYCS
VPS52
RPS18
MRPS16
RAB18
SNIP1
SEC23B
WDPCP
MDH1
NSA2
GFM2
RPL5
CCNI
AP3S2
NCOA7
ITFG2
ATG4C
ZNF461
HIGD2B
BBS4
RUNDC3B
IL1RAP
SELENOH
INTS5
PLCH1
SF3B5
LOC100421372
HSPA14
CDNF
FRA10AC1
CCNC
TOMM20
SLC24A1
INTS14
AHCYL1
FAM199X
DNM2
HDAC8
DCT
THAP10
LRRC49
ACOX3
TRMT44
PACSIN2
COMMD2
UBE2L3
RIMBP3C
RIMBP3B
FOXO3B
TM2D1
ZNF790
ZNF383
ZNF585A
ZSCAN30
TMBIM6
YTHDC2
PLEKHM3
PRIM2
H4C15
H4C14
MRPS23
UBOX5
FASTKD5
MRPS18C
HELQ
KLHL20
PPIP5K2
GIN1
TARS3
KRR1
FKBP7
LSG1
VTA1
NMBR
SLC35A3
SMG7
CSTF2T
DQX1
TBC1D32
FEM1C
RPS15
PPIL3
NIF3L1
PLK2
BAAT
TUT1
SLITRK5
PARPBP
NUP37
DHRS13
UCHL3
COMMD6
BCL2L13
DHTKD1
C10orf88
NUDT15
RPL27
SMG5
TTLL1
GTF2H2
GTF2H2C
AARS2
RBM45
KRTAP19-2
DRG2
PIH1D2
NKAPD1
COL4A6
COL4A5
SLC39A6
SPAG9
POLDIP3
SRP9
DYRK4
UTP25
INO80B
ABCG1
TSPAN2
MED18
TMEM101
CEP120
CSTF1
AURKA
EPRS1
TMEM208
LRRC29
BTD
CCDC150
HACL1
IFTAP
ASB13
SNRPB
SNRPD1
TMEM30A
TSTD3
EIF1AD
BANF1
ECHDC1
MAST2
RAB5IF
PPIG
PIKFYVE
RPA2
RSPH3
DEDD
HTR3A
TNPO3
STK32C
VPS35L
ATP1A1
HAX1
SLC35B1
THOC5
CCDC90B
ALKBH3
RALBP1
AIFM1
MRPL1
TSSC4
POLG
MAGOH
CREM
CRNKL1
CFAP61
B3GALNT2
EPHA3
ARHGAP24
BRAP
ACAD10
NKAP
RPS14
WDR74
SMIM13
IRF9
RPTOR
EFHD1
SPATA5
NUDT6
ARMCX5-GPRASP2
ARMCX5
NR1H3
ACP2
CFAP20
POLR1H
TMA16
DCLRE1B
AP4B1
RWDD1
PARP2
SNAPC5
ATR
QRICH1
CUL5
PARK7
VPS33A
SLC17A5
SNRNP35
PACS2
CEP350
RANBP17
DDX41
ZNF56
AQP10
FAAH
VPS13B
MTO1
ZSCAN31
ZNF791
ZNF490
ATP5F1B
LSM5
PDGFD
ZNF302
SF3B6
FAM228B
RAD51AP1
C12orf4
INTS12
GSTCD
PPP6R1
SCAND1
SREK1IP1
CWC27
NEK4
TMEM128
CC2D2B
CCT8
CNIH3
TRUB2
COQ4
HTR5A
STX16
TSFM
PUS10
PEX13
ZNF527
ZZEF1
CYB5D2
RGPD1
RGPD2
BANP
CCDC174
RTTN
MRPS31
MRPL48
LTN1
S100A4
AP1G1
LTA4H
LURAP1
OSGEP
APEX1
HMGB1
USPL1
CDC73
ZBTB45
FDXACB1
C11orf1
ZSCAN25
GTF2B
HMGCR
PROS1
PBLD
HNRNPH3
ERCC6
TFIP11
ALG10B
CBWD5
CBWD3
SRSF11
LRRC40
LONP1
CATSPERD
NUP42
C6orf118
SLTM
INTS9
HMBOX1
TTLL12
MTIF2
C8orf37
SMG8
CCDC130
CCDC97
SDHAF3
MRPL42
PRRG2
NOSIP
SRCAP
LOC730183
RBM7
C11orf71
TRAPPC2
OFD1
TPR
ODR4
MTOR
N6AMT1
SASS6
TYW3
CRYZ
METTL7B
SHC3
TMEM43
CHCHD4
MAP7D2
GJB7
AAR2
EIF5B
TXNDC9
CBWD2
FAM50B
TDP2
ACOT13
GALK2
COPS2
COG2
AJUBA
WDHD1
SOCS4
ANO6
GPATCH3
SRRM1
SRA1
LMNTD1
ZUP1
COPS4
TIPARP
SLC35A1
MRPL40
HIRA
HECTD1
CNTRL
C5
APOL2
RAMAC
MAP3K7
SH3RF2
INSYN2B
INKA2
DDX20
SRP54
ZNF566
TCTE3
ERMARD
CHEK1
NMT2
GSTP1
CCDC43
PPP2R3A
RPAP2
GLMN
RBBP6
GALT
DENND2C
SENP1
PFKM
FBXO22
ATG101
PIGL
C6orf226
ZNF2
DARS2
CENPL
RANBP2
FAF1
IRAK1BP1
ZNF589
ZNF260
ZNF562
SLC44A1
MDC1
CD2BP2
PI4K2A
ALG10
ZNF518A
TMEM167B
ZNF286A
ANO8
PCDH9
PRC1
GPR176
TOR1AIP1
RMND1
ARMT1
TTC14
TIMM17B
PQBP1
TOMM20L
ZNF331
ZBTB8OS
RBBP4
ALG9
PLAC8
MRS2
SMIM35
SLC9A3R2
CYB5R4
CCNL1
RNF207
DROSHA
C5orf22
PNISR
FLRT3
WDR36
DDX18
DHX16
STAU1
FBXW7
TRMO
DDX27
AGPAT3
IFT172
TARM1
NUP54
MTBP
MRPL13
SEC22B
PNPO
DHX8
UBXN4
SLC10A7
H4C4
SYNE1
STX18
SNX17
EIF2B4
UFL1
CD55
CTH
HEXA
FAM124B
MRPL21
IGHMBP2
TGFBR2
DNAJC21
BAIAP2
ARHGAP19
SS18
DCAF10
POLR2J3
PDE12
GLIS2
SLC3A2
TXLNG
NPAS4
LRP6
CRBN
INTS2
RETSAT
TBRG4
AGBL3
FOXP1
NUP133
NECAP2
RPS3A
RPS26
CHCHD6
CCDC124
RPL22L1
NUP205
KDM1A
ZNF408
ARHGAP1
PES1
EIF4E
ZNF570
ZNF569
NOL8
CENPP
ZC3H10
DHDDS
BASP1
RBM26
SESN1
CEP57L1
CMPK1
DUSP12
RNF182
STAT3
SUGCT
MPLKIP
DDX1
CLASP2
SELENOT
ST7
TAF10
LYRM2
PPP6R3
ACY1
CLUAP1
SCYL3
NOL11
ZNF484
HINT3
DUS2
DDX28
SIAH1
EFCAB2
FAN1
RPL37A
ZNF14
CALD1
SLC25A51
PHIP
PTPN4
CYB561D1
DPP8
ZNF254
EFR3B
ACYP2
C19orf12
KIAA1191
SNX8
PITHD1
ENPP4
CLIC5
FBXO16
GTF2H2C_2
FAM160B1
ASNS
EIF5A2
COMMD9
EIF4G2
RGL2
L3HYPDH
JKAMP
DDX39B
ASB8
ACTL8
DNAJC24
DCDC1
EEA1
CRLF3
CIZ1
RARS1
TMEM248
NUP155
PDSS2
S100A13
S100A1
ZNF714
SMU1
CSDE1
FKBP5
PKD2L2
UFSP2
HIPK1
ACTR3
TSNAX
CORO2B
POLR1F
RRP15
POLR2J
SLC18B1
PRMT2
WDR55
ZNF25
KBTBD3
AASDHPPT
SPATA18
ZNF687
PIK3IP1
KLHL32
YES1
ANK3
CORO2A
GABPA
ATP5PF
ZNF350
AP3B1
BOLA2
CZIB
SLX1B
SLX1A
BOLA2B
MIS18BP1
RAB3GAP2
PNPT1
GLIPR1L1
CUTC
COX15
PLD4
COQ8A
LZTR1
RNF216
RPS12
LNPEP
PIGK
PRCC
TTC13
ZMYM4
H2BC8
H2AC8
SERTAD4
RPS19
POLR3G
MBLAC2
ESCO1
RNF11
TMEM144
IFNAR1
CSRNP3
GAREM1
INTU
OPA1
C18orf21
CDIPT
CRB1
MPHOSPH10
MCEE
MRPL24
UTP6
PUM1
GNAL
APRT
TRIM5
GFM1
SRSF10
HAUS6
NT5DC1
UMPS
GORAB
MRPS33
U2SURP
TTC21B
SIKE1
PSMD14
ANXA2
ZNF184
RBM34
EFCAB6
BMS1
RUVBL1
ZCCHC4
MAPK1IP1L
C11orf49
TRAM1
GOT2
DCP1B
HBS1L
HMGN4
CBWD1
IL11RA
FOXP4
DYNC2I1
ZNF304
OCIAD1
MKS1
PSMD6
ZNF354A
CWC25
ZNF613
ALDOA
CNOT1
ERAL1
IFRD2
INIP
SCNM1
LYSMD1
PRR14
MRPL10
LRRC46
SH3GLB1
FAM227B
DTWD1
ATP10D
THG1L
UBE3B
PPP1R8
RAB11A
GPR137
SRSF7
WDR61
MRM3
GLOD4
MFN1
ZNF684
ZNF565
ZNF146
SORBS2
DPY19L4
FGFBP3
MEGF8
VPS25
LAMTOR5
MRPL17
DDX50
MSL2
ATP6V1C1
ZNF362
BTG1
ZFYVE1
NBPF1
DPYD
H4C8
ATP6V1B2
LIN54
RLF
NDUFC1
NAA15
EPHA5
NDUFAF4
ZSWIM1
IPO4
EIF3E
NDUFA6
WRN
NEU1
TRIM59
PURG
CSNK1E
FSD1L
PRPSAP2
PDE7B
PLS1
EEF1AKMT2
MAST4
CUL2
NEK2
MCAT
STAM2
GTF3C6
RCC1
LCMT2
ADAL
ANO3
SEC13
PPOX
NR1H2
ANKRD13C
TMEM69
ASCC1
ANAPC16
TOMM40L
AKAP1
ARRDC3
TSEN15
SLC39A3
ARL14EP
GOSR1
GMPS
PSMD9
HPD
TBRG1
ELOVL1
P2RX6
WDR5B
CEP126
CAAP1
ADAM15
CFAP410
PPIL2
ARID5B
CRY1
ABLIM1
ZNF510
LSM11
EIF2AK3
ZNF420
COG7
RIMS2
RNF146
ZRANB2
HLCS
SNX14
CREB5
BVES
TGOLN2
ZNF215
LRRC61
ACTR3C
ARPIN-AP3S2
ARPIN
INO80C
CENPV
ADPRS
TINF2
TMEM106B
ADAR
ATPAF1
CYB561A3
TMEM138
ATP5MF-PTCD1
ATP5MF
SPATA7
PGD
ASCC3
PRCP
POT1
THAP1
KHDC4
ZNF224
LENG8
DDIAS
COPS7B
ERCC6L2
MRPS15
PRMT3
SMAP2
OAZ3
MRPL9
IQCH
AAGAB
ARRB2
PRDM1
MTMR9
ZCRB1
PPHLN1
SLC35A5
ATG3
AFG1L
VWDE
ANKHD1-EIF4EBP3
ANKHD1
CEP162
GMNN
CCAR2