ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
KCNJ15
UBC
MTRNR2L8
NUF2
TTLL1
CCDC130
RERE
LOC102724265
TTLL12
MTRNR2L2
DCP1A
GBA
BSDC1
ITGB3BP
EFCAB7
RABGAP1
NPAS4
HTR5A
SLC24A1
INTS14
SLC44A1
STX16
PCDH1
DRG2
ZNF623
COMMD2
ZFP30
ZNF76
FAM207A
NWD1
PEX3
ADAT2
TRIM9
GNAL
YTHDC2
GTF2H2C_2
GTF2H2
POLE4
CADPS
APRT
ZNF670
MTF2
SUB1
EIF2D
FAM227B
DTWD1
RAD54L2
SLC44A2
DOCK7
WDR11
GALK2
COPS2
SAMD4B
ATP1A1
DNAJC22
SSBP1
FAM72C
INTS5
RBBP5
PDE7B
TRIP4
SF3A3
TPM1
SCRT2
ATP5MC2
STX6
PSMF1
INTS12
GSTCD
IPO4
NSFL1C
ATPAF1
ALG10B
PGBD2
NDUFS7
NRF1
STX18
DNAJC25-GNG10
DNAJC25
DCAF10
CCNC
UIMC1
MRPL16
FUT8
MFAP3L
SRGAP2B
FAM72D
TRIM29
PDE11A
GTF2H2C
SRRM3
DRAM1
JMJD1C
REEP3
MKRN2
NDUFS3
KBTBD4
GABPB2
TMED1
ZNF205
PAXBP1
HMGB1
USPL1
MRPL3
PRMT5
GEMIN5
GLTPD2
RPL27
NTSR2
RNF24
DPY19L4
ANKRD40
WDFY1
SRGAP2
FAM72A
AURKAIP1
TACO1
VPS13D
DMAP1
B4GALT7
TVP23B
TPBGL
TMEM41A
TRAM1
BARHL1
USP30
MED23
LRRC59
RPS29
SLC39A13
NFAT5
SEC22B
RGPD5
EXD2
RGPD6
SEC13
LRRC37A3
EEF2K
DSTYK
FOXO1
WDR36
ZER1
RBBP8NL
C10orf88
BCL9
BCAR3
TCF7L2
TSNAX
HMOX1
KMT2A
ATR
MTHFD2L
AKAP13
CREG2
RHOT2
POLR2C
RGPD1
RGPD2
PRELID3B
PPA2
DYNC1LI2
MNAT1
RPS14
TATDN3
NSL1
DUSP6
DCLRE1B
AP4B1
ZNF697
FAM72B
SRGAP2C
ISM1
CBX1
CDC73
HUS1
GNB2
MFAP3
FAM114A2
AQR
PRRG2
NOSIP
LRRC10B
EPS8
DHX8
ANKRD46
ZNF829
ZNF568
OPA1
TMEM259
PDE4C
PPFIBP2
SNRPB
NEUROD4
HERC3
PYURF
PIGY
LUC7L2
FMC1-LUC7L2
MRPL44
EIF3F
CEP135
TCF3
DLG2
SLC33A1
TOR1AIP1
GRPEL2
REXO4
YPEL1
TMA16
ZNF354B
FRG1
DUS1L
TEFM
TSEN15
PPP6R1
EPRS1
TUBGCP3
SPATC1L
DYNC1I1
MAPK1IP1L
CRLF3
TRIM16L
C16orf89
ZNF527
DAG1
CALM1
CABIN1
DHTKD1
CPLX2
IQSEC3
SMARCD2
TMEM39B
DRAP1
C11orf68
FUT10
RRP15
CYREN
ATP5MPL
CHD1L
PRKAB2
TJP3
FXN
PHKG1
GTF3C3
CLUAP1
TOP3B
IRF9
SIKE1
WWOX
ZNF621
CLK3
FECH
USP54
TNFAIP3
TRMT61B
UTP11
XKR8
RNF149
KRTAP10-7
CEP72
AGK
FAF1
CAPN2
TMEM242
NCOA7
ALKBH3
VPS13B
LAMP1
FAR1
ZNF438
ZMIZ2
TMPRSS11F
RPS7
TTC26
BRF2
SDHAF3
EP400
C10orf95
C9orf152
ANXA11
TP53I3
IGSF9
ZNF286A
ANKRD52
TTC32
SLC25A51
TDP2
ACOT13
FAM98B
DDX1
CCDC107
LARS2
PLEC
GTF2H4
ZNF197
LPCAT4
UBA52
CIAO3
TBCD
DPH6
ZNF557
HPCAL4
INO80C
ZSCAN22
CCAR2
ANKRD36
CAPS2
FNTB
NRG3
RPL37
DISP1
TDRD7
B3GLCT
C5orf49
AQP4
FRAT1
CLDN8
PPIP5K2
GIN1
ILF2
ADRM1
MRPL38
FAM71E1
EMC10
CTNNB1
MGST3
TBL3
BLOC1S5
PDS5A
RILP
MYO9B
HAUS8
MED12L
NME1-NME2
NME1
C8orf37
ZNF350
YIPF2
TIMM29
ASCL5
STRBP
TMEM43
CHCHD4
JOSD2
MRPL55
LTB4R
LTB4R2
CIDEB
AP3S2
ABCA3
NUP155
RNF7
UCKL1
SESN1
CEP57L1
CGGBP1
C3orf38
B3GAT2
RPL6
FZD1
SAYSD1
PTPN11
LUC7L
AARS2
TMEM222
TIPARP
ASB6
PYM1
RAPH1
ACKR3
ADAM22
WIZ
FAM162A
CCDC58
NAA60
TPR
ODR4
TMEM68
TGS1
KRTAP12-2
TBC1D19
TUT1
HSPE1-MOB4
HSPE1
HSPD1
SNRPB2
COG2
SELENOT
USP22
SFT2D2
SNAPC2
CASZ1
NDUFB3
FAM126B
SLC39A3
KMT2C
SQSTM1
MGAT4B
KANSL3
FAM133B
GCFC2
HARS2
HARS1
PLK1
BPTF
CLN6
UTP3
CPPED1
TSPAN10
NPLOC4
DNAJC11
CCDC174
RSAD1
KDM3B
TMEM248
TMCO1
NSUN3
DHFR2
RASA2
SNX18
CACNA1E
ADPRHL1
SNRPE
CYP51A1
CRNKL1
CFAP61
TBPL1
FOXN3
PSEN2
PUM1
PTPN4
SNX19
ZNF891
ZNF10
DPH7
MT1X
SMPD2
PPIL6
ZNF721
PIGG
CFAP45
AASDH
HMGN4
MLST8
C11orf52
FRMD5
PRR15L
MAPRE2
BNIP1
POLR3E
DGKZ
GALNT10
CCDC69
CITED2
SLTM
ZNF331
RBBP9
GTPBP3
KNL1
PET117
KAT14
ANO8
DLC1
ATXN2L
WDR41
ZNF529
C7orf25
RNF11
MDM4
EIF3G
ZNF354C
POGK
TET3
SLC37A4
SIGIRR
BIN1
TRMT5
SLC38A6
DHX16
DDX46
HES3
MAD1L1
NAXE
MTR
TARS3
NBN
VAMP4
FAM3C
ZNF33A
CCDC112
RGL1
HOXB9
BOLA2
BOLA2-SMG1P6
SLX1B
SLX1A
BOLA2B
VWC2L
CFAP36
MFSD4B
PLAGL1
MKRN3
C1orf115
YPEL3
SUPT7L
SLC4A1AP
C17orf75
NMNAT1
LZIC
RNF145
ZNF879
NPL
CD8A
IRF5
ANKRD62
MRPS18C
HELQ
MRPL1
METTL9
RBM28
EXOC2
ERI1
SAXO1
RRAGA
WASHC5
NSMCE2
VPS37D
FKTN
DNMT3B
IAH1
TRAF6
RAG1
FBXO22
HNRNPD
VPS25
SYT7
ZNF582
TNFAIP1
IFT20
TMEM18
SPAG8
NHSL1
IGFBP3
MRPL21
IGHMBP2
RPS3A
PRR14
WDR7
MARCHF11
MTG1
SRGAP1
NDUFA2
IK
IL13RA1
FGFBP3
RNF6
ZSCAN9
GDF11
PABPC4
MAP3K13
ZMYM3
DPP9
NDUFAF1
CLUL1
FKBP5
PDHB
SARAF
VANGL1
NUDT17
SLC16A1
RBPJ
CDK5RAP1
KLHL20
MIER1
RARS1
RALBP1
NDUFAB1
IBA57
CYP2R1
NLRX1
ANGEL2
ERCC4
GGCX
TLL2
C4orf48
FRMPD1
CYP4B1
ZRANB2
ERMP1
ZBTB26
MRPS31
BANP
CRBN
CYB561D1
SPATA18
ZNF554
MSL2
NOMO3
BTG1
NOMO2
ZFYVE19
DNAJC17
YWHAZ
SMPDL3B
LRRC26
PPIG
SNX17
EIF2B4
PRPF18
POLG
NOTCH2NLC
CELF1
ARHGAP22
ZNF484
RABIF
L3HYPDH
JKAMP
ACO1
STK10
TSNARE1
BARX2
COX16
FRA10AC1
ALG10
CASC3
DPP8
PPP1R8
ZNF326
DISC1
BACH2
C3orf80
ASL
ZNF530
ISM2
SPATA22
IGIP
NOP16
HIGD2A
NDUFC2-KCTD14
NDUFC2
TMEM106B
VPS4A
FAM50B
ARAP1
TIMM9
KIAA0586
NUP214
NUDT7
PDAP1
BUD31
VPS28
RAB3C
ADRA1A
GINM1
DUSP4
SCOC
TTC4
PSMA1
WDR70
RBL1
MRPL34
PTBP2
LRRC37B
ZNF219
GPCPD1
ZNF441
CTSH
SORL1
ARHGAP28
DOP1B
COIL
CEP126
MRPS22
TCAIM
TMEM14A
SPCS1
GLT8D1
RNF135
GPAT3
MALL
STAT3
TIGD1
EIF4E2
ZNF383
ZNF839
JRK
ATG16L1
KANSL1
C19orf53
ZGRF1
LARP7
XRN1
GUF1
RANBP3
ZNF77
RHBDL2
CLTB
MRPS14
MAGOH
U2SURP
OGT
EDC4
CRB1
CNOT6
GDPD1
POLM
RMND1
ARMT1
ZNF609
UCHL3
COMMD6
MDC1
YJU2
ZZZ3
ZC3H6
FSIP2
ITM2C
ACAD9
VAT1L
SNAP47
JMJD4
NUP54
DDX18
CRKL
CBWD5
UCHL5
RO60
TSC22D4
TBRG4
LINGO1
WASHC2C
RBM17
FAM47E
PAG1
COX10
FAM47E-STBD1
HEATR3
CREG1
SELENOH
NUP107
PKIB
ARHGEF12
NOTCH2
RPL10A
SEMA6A
CYP20A1
NUFIP2
ZNHIT3
FOXRED2
TXNDC15
RUFY1
BEND3
EML5
H4C8
TOMM20
PDE4D
SECISBP2
RMDN2
ERLIN2
C1QBP
DNAJC1
LRRC8B
HAUS5
PRKN
PACRG
FAM151B
FAM124A
SMKR1
SORBS3
SF3B6
FAM228B
STOML2
GTDC1
C7orf26
ANKAR
SPOCK1
GFUS
SARS2
MRPS12
BTBD11
RNF223
MRPL40
HIRA
KCNH1
PRMT3
SPEF2
TRMT11
GCLM
RNF220
KCTD5
IL11RA
PDSS2
PKIG
CFAP410
DEF6
TBCCD1
DST
PSMC1
BEND6
XYLB
PER3
PLA2G2C
FRMPD2
PRRT1B
FMC1
COX7A2
SOD2
RIF1
WDR43
EIF5B
HEMK1
TXNDC9
ARL8B
ANKRD36B
SLC27A4
FITM2
NDUFA12
ADPGK
HERC5
SPTLC2
PRMT2
UBA2
TRIM8
ZFHX3
KLKB1
ZMPSTE24
NSA2
GFM2
TSFM
DNAJC24
DCDC1
CIZ1
RETSAT
YTHDF2
PDE8A
RESF1
THOC3
CDC7
SRI
MAPK8IP3
LRP12
SUDS3
PRKACA
LGMN
TMEM185B
MOB4
MITD1
PPIH
BAZ2A
EDEM2
BUD13
TNFRSF10D
NSG2
EXO1
TBCE
TMEM106C
HASPIN
CBFA2T2
ADCK5
SP6
GCH1
KRTAP10-6
FEM1C
LSG1
SACM1L
MCOLN1
GOSR2
TUBE1
FAM229B
MALSU1
ZNF624
PLD3
C19orf47
DAD1
YOD1
PFKFB2
LPIN3
HSD17B4
SCAND1
C18orf21
NOXA1
EIF1B
ATAD2B
CPE
ATP23
PARP16
SDK1
FAM234A
TMEM70
AMN1
TCHP
TLCD4
RNF43
RGPD8
DSE
TLCD4-RWDD3
CXXC1
SLC66A3
LOC100287896
LIPT2
ZNF232
TSPYL4
RPAP1
VPS39
OTUB1
ZNF71
DNAJB12
GPAM
SMIM12
BORCS7
NAA20
ATP6V0D1
ERCC5
ZNF827
ZNF585B
MAF1
PPIL4
MON1A
STYK1
PRKAG1
ZDHHC21
GSX1
NCOA5
DDX23
DAAM1
ELMO2
EVPL
PARK7
STXBP3
UGGT1
ZNF212
RBM25
BBS1
LNPEP
SHF
SLC25A21
INAFM2
AKR1A1
CHRNB2
INTS1
MCC
NAGPA
NUP85
PLPPR2
CSRP1
STC1
R3HCC1
MAN2C1
MEMO1
CENPF
HLCS
PTCD1
CPSF4
FBRS
FAM172A
ZNF277
DOCK4
TIGD2
CD300LG
ATP6V0C
FLYWCH2
SOCS1
CCDC59
TPK1
SNRPD3
GUCD1
ELP1
ABITRAM
STMP1
KIF15
KIAA1143
ATP5MF-PTCD1
ATP5MF
C3orf33
HSPA6
SLC22A5
DPY19L1
ARID5B
PCLO
UBE2E2
MNX1
NR1H3
ACP2
PLEKHM3
SCNM1
LYSMD1
RBSN
ARL6IP1
YES1
ZNF180
DTD1
LRP10
HCN1
ZNF429
HPS3
SUCLG2
PFDN1
REXO1
RGS3