ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
BSDC1
COL4A6
COL4A5
SUPT7L
SLC4A1AP
KCNJ15
MTRNR2L2
ZNF408
ARHGAP1
GABPB2
KDM3A
ATF7IP
YPEL3
PAXBP1
SMG5
CDIPT
RPS26
THG1L
ZNF571
ZNF540
CALCRL
UBB
PRPSAP1
RPH3AL
TCTEX1D4
BTBD19
RPL27
HDAC8
TFPT
PRPF31
AHCYL1
PIH1D2
NKAPD1
KAZN
CELF1
CCNI
NDUFB3
FAM126B
CLPTM1
GTPBP3
LRIG2
AURKAIP1
SSBP1
RGPD1
RGPD2
PPIL3
NIF3L1
PPP6R1
RCAN1
RBBP5
INTS5
ZDHHC6
VTI1A
POLR3A
NOL12
ABRACL
SLC39A6
GTF2H4
NEK2
LY6K
ISY1-RAB43
ISY1
CDK12
KDM5C
IFTAP
ARHGAP39
MAST2
EIF2S1
ATP6V1D
RAD51AP1
C12orf4
DUSP6
ZNF302
CREM
ZNF383
PDE12
IL17F
SIRT3
PSMD13
TBL1X
MRPS33
UBE3B
SLFN12
RABGAP1
CD2BP2
GBA
ZNF585B
MMACHC
CCDC163
DNAJC16
FAAP20
SLC33A1
NBPF1
COX7A2
WDR83OS
WDR83
HAX1
SNIP1
AP1G1
ITFG2
IGFL4
B4GALT3
TTC26
SF3A3
MTF2
DMAC2
ZW10
AAAS
LACTBL1
GPC6
ZMPSTE24
ILF2
COIL
TRIM5
NME1-NME2
NME1
LRP6
PPRC1
DYNLRB2
ARMCX5-GPRASP2
ARMCX5
TMEM242
EPRS1
C3AR1
STC1
EIF3F
SELENOH
BAIAP2
IFI6
YWHAQ
COX16
NEMF
COPS4
WDR55
TNPO3
MICALL1
MTR
STK40
AKR1A1
SNRPD1
RFFL
DDX42
CCDC47
TYSND1
HEMK1
YTHDF2
GLIPR1L2
CYB561D1
AIFM1
MRPL54
APBA3
CASP10
JMJD1C
CHMP7
VPS35L
CEP120
USO1
TPK1
PLEKHG1
C1orf174
RERE
MRPL1
ZNF790
PACSIN2
RABGAP1L
INTS2
RPL11
RNF125
LSG1
HEATR1
RMND1
ARMT1
ZNF226
FNTB
RNF207
DNAJB12
MED11
RPA2
ZNF793
TIMM10
REXO4
SLC25A53
PHF5A
ACO2
ZNF335
ZNF56
CGGBP1
C3orf38
INKA2
DDX20
CCNC
MTBP
MRPL13
TBC1D19
EIF1AD
BANF1
STAT3
TRUB2
COQ4
TUFT1
SH2D5
CCDC130
PLK3
RSPH3
PEAK1
HMG20A
GAPDH
UFC1
UQCRC2
PSMB5
GPX1
ZSCAN4
CLASP2
CEP162
CPN2
TUT1
TRMT11
EIF5A
ZBTB40
RBM25
CALCB
ZNF331
NOL8
CENPP
DYNC2I2
SLC35A4
APBB3
RBMS2
GTF3C5
FEM1C
CLCN3
RCAN2
NRL
DCAF11
FRRS1
CCDC97
TRMO
PSMB7
SIN3B
ANKRD1
BORCS7
RFXANK
BORCS8
USP9X
PCNP
CSTF2T
ZNF461
C19orf25
CLN3
NME7
BLZF1
ZNF623
ZNF829
ZNF568
ZNF221
TIMM9
KIAA0586
PRKCSH
CCDC151
AASDH
TBC1D22A
ZNF566
ELSPBP1
ZSCAN30
TCIM
KDM1A
ZSCAN22
SCYL3
SLITRK5
KCTD9
CDCA2
ZKSCAN2
GORASP2
EFHD1
LURAP1
TRMT1
NAV2
ZNHIT3
TTC31
CCDC142
ZSCAN23
MNAT1
XPNPEP3
ST13
NCOA7
SMG8
BNIP1
SESN1
CEP57L1
UIMC1
TRAPPC8
TM2D1
SUGP1
MAU2
STAT6
CCNG2
SLC7A11
SCARB1
FRA10AC1
RPS3A
IRF9
ZFP30
WDR11
UBQLN1
TBCB
POLR2I
ADRA1A
EXPH5
PLS1
SLC39A9
ERH
CLASP1
TFB1M
EFCAB14
PPIP5K2
GIN1
RBL1
ZRANB2
HOXB13
UTP3
PRPF18
FAM234A
TOMM40
ZNF300
GPATCH3
C6orf118
CD320
TBC1D1
FCRLA
ABCF2
PEF1
MRPS18C
HELQ
NUDT5
CDC123
SULT1C2
NOP16
HIGD2A
EIF3E
PLPP5
PSMD3
ARMC1
CMSS1
NDUFS7
MED18
EIF2AK3
CSNK1E
SMIM12
PEMT
CACTIN
RGL2
CELF3
TTLL12
ALG14
SNRPD3
GUCD1
SIRT4
C19orf48
LZTR1
PREPL
CAMKMT
ROCK1
SLC1A3
TTC32
VPS13B
PES1
NIP7
COG8
HBS1L
SH3BP4
TEFM
RPS27A
CLHC1
MRPS23
SUGCT
MPLKIP
SPEF2
RPS7
TIGD1
EIF4E2
UFD1
CDC45
RPL26
TXN2
EHD2
GTF3C3
OSBPL8
RUFY4
SPR
POLD4
KAT7
PLK2
HACD2
RETREG2
CNPPD1
INO80B
SOD2
WTAP
TMBIM1
TTC14
ZNF2
SNX3
ABCD2
NRDE2
FURIN
PIP5KL1
RBM45
CLTC
IFT46
NEURL4
PIK3CB
PUS10
PEX13
ZNF165
KIAA0319
ALDOA
NECAP1
CES3
ZNF14
CCDC59
CEP85L
TMEM259
CCDC107
SF3A1
CCDC157
STX12
HSCB
CHEK2
LIMCH1
CBR1
PRKAG2
PNISR
RPS14
ZBTB45
YJU2
VPS52
RPS18
CZIB
DNAJC25-GNG10
DNAJC25
INO80C
CCDC174
GABPA
ATP5PF
MDC1
FDXACB1
C11orf1
ZNF708
UTP18
MBTD1
KLK10
STX18
ZNF585A
TMEM128
TMEM69
HAUS6
DLAT
KIF20A
BRD8
WASF1
CDC40
KMT5C
RUVBL1
IPO13
ZNF260
GABARAPL1
CENPA
SULF1
NHS
CDK5RAP1
BANP
SFSWAP
OSGEPL1
RHOT1
ZBTB8OS
RBBP4
CPPED1
RIF1
SASS6
COPS7A
CLCN4
POLR2J3
UBXN7
ZFC3H1
THAP2
USP22
ZNF24
METTL1
EEF1AKMT3
SLC25A44
NKX3-2
PEX3
ADAT2
IPO4
POLG
DDX41
CTH
LIMA1
WASF2
PLEKHG2
G2E3
MAN1C1
MOB4
MRPL48
MEGF8
PIGL
ADGRL1
DNAL1
ACSL1
BRCA1
LRP10
DMAP1
UBOX5
FASTKD5
TIMM50
DCLRE1C
PTPA
CRAT
GCNT2
IFI44L
ABI3BP
TMEM222
SRSF4
CORO2A
SRSF1
GTF3C6
PMF1-BGLAP
PMF1
ATXN7L3B
DHX16
ATG4C
TARS3
DDX46
PPOX
DYNC1I2
ANKRD17
RPF1
MRPL27
EME1
FUCA1
CDK5RAP2
MRPS14
THOC5
AP3B1
CALM2
SBNO1
TXNDC17
KIAA0753
SLC35E2B
ADIPOR1
HTR3A
LYPLA2
PAFAH2
TMEM101
FOXO3B
RPS29
NDUFS3
KBTBD4
APOL2
TAOK2
GTPBP2
INPP4B
GALM
TM9SF4
TAF12
SECISBP2
SRCAP
LOC730183
ACP3
DONSON
SULT2A1
FHL1
ZSCAN25
DNAJC11
PIKFYVE
SMARCD1
ATP2C1
FOXP4
UBL7
POLR3F
DZANK1
ZNF573
CSTF3
GHDC
TRMT61B
SPNS1
ZBTB20
KLRC2
ZNF791
ZNF490
VPS45
MCCC1
PDE4DIP
S100A13
MUC1
HIRIP3
CDK11B
NAA38
NSUN3
DHFR2
CYB5D1
MBNL2
ZNF215
S100A1
LMNB2
SEC16B
BRD4
TNFRSF19
HEXIM1
WDR5B
SMAD3
RBM42
AGPAT4
ARHGAP18
IFIT3
SH2D3C
PRSS23
RAB30
NEK4
CYB561A3
TMEM138
TAF13
FAM124B
AARSD1
ACBD4
HIBCH
FAM199X
USF1
SCGB1A1
PDCD6IP
C18orf21
QRICH1
DNAJB4
BCL2L13
FGD4
ORAI3
CACHD1
DDI2
MED16
PDE4B
CHST4
CCDC74B
SELENOP
SCP2
SPHK2
RPL18
PSMD8
TIMM22
NAPA
KIF2C
ASXL3
LMNB1
GDAP1
CMPK1
DHDDS
IREB2
CARS1
DNPEP
WDR75
SYNJ2BP-COX16
SYNJ2BP
VWA5A
GBP2
APOBEC3G
RPL23A
PPIG
DNAJC6
CENPW
ACBD5
LRIF1
PPIL4
ZNF764
RCC1
COA3
CNTD1
CREB3L2
RTTN
APRT
SPAG9
TRPC4AP
PMVK
MECR
INSYN2B
ZNF506
ZNF416
FAM71E1
EMC10
SHB
ACOX3
TRMT44
LSM5
GNAL
GOSR1
ANO8
SLITRK1
ELOVL1
SIAH1
PDK2
CCDC74A
KANSL3
MTIF2
MRPS15
PRRG2
NOSIP
TMCO6
EXOC7
AIP
LMNTD1
ZNF806
TTI2
SNAP47
JMJD4
C2CD5
KDM8
UBE2Z
CD55
TBC1D9
CDRT1
NOS3
PUM1
NR1H3
ACP2
MTOR
FAM13A
FBXW7
ZZEF1
CYB5D2
KIF15
KIAA1143
ARHGAP19
PSD
AMOTL1
ZNF254
MRTO4
EMC1
RPAIN
NUP88
KIFBP
PRR13
PCGF1
FBXL15
PKD1L2
SF3B6
FAM228B
PPIH
CRNKL1
CFAP61
CCT8
FAM160A2
PRR3
GNL1
PTCD2
MRPS27
FBXO16
CFAP298-TCP10L
CFAP298
NECAP2
ZNF518A
SENP1
PFKM
EIF4A2
FKBP8
PRKAB1
COG7
KXD1
NDUFA9
AKAP3
ARHGAP9
MARS1
CCS
CCDC87
NXT2
ZNF576
IRGQ
DDX18
ATP5MC3
WDR43
RPS19
ARRB2
ATAD5
REPS1
AMPD3
CASP8
EGLN2
MFSD6
CLASRP
HMGB1
USPL1
HSPE1-MOB4
HSPE1
HSPD1
SLC35B1
PSMA1
TMBIM4
ACVR1
ANK3
SLC35F2
PRKCI
ZNF180
ANK2
ZNF700
ARL6IP5
CSRNP3
GRIPAP1
TMX2
MED19
NUDCD3
INTS4
FAM217B
SLC25A21
PPP1R3D
CUEDC2
RAI14
SELENOF
HS2ST1
TMEM219
PPP6R2
TBC1D17
AKT1S1
RRAS
MED28
PHB
MAT1A
AP3S2
C8orf37
SREK1IP1
CWC27
WARS2
ARL14EP
PARK7
UBXN4
GPN2
SULT1C4
CERCAM
TNPO2
SNRPB
AARS2
WDPCP
MDH1
POC1B-GALNT4
TNFAIP1
IFT20
WDR89
RUFY3
DHPS
ZBED5
MTFR2
ERGIC2
DNAJC12
SMG7
GTF2B
SMAP2
IRAK1BP1
ZNF687
MYBBP1A
SLC30A10
SH3BGR
PIMREG
PLA2G4C
CLUAP1
MST1
COQ3
MFN2
IWS1
RPL23
TBX18
CENPH
TEX2
AKIRIN2
MTRNR2L10
DTX3
NSA2
GFM2
GMPS
RPL29
GCLM
RIMBP3C
RIMBP3B
ANKRD13C
ANXA11
PRR14
SNU13
ZNF599
NFX1
ELP5
CTDNEP1
STING1
DENND6A
RTCB
DRG2
RABGGTA
PLCH1
TENT2
MRPS16
KLHL32
YLPM1
CHD9
EXOC5
AP5M1
TRIM23
TRAPPC13
SHLD3
KIF27
GLRX
SPRY1
VTA1
NMBR
SCAND1
THAP10
LRRC49
ZZZ3
NAT10
RESF1
IPP
FBXO8
CEP44
EXD1
CHP1
ATG16L1
CALD1
PCNX3
MAP3K11
PIK3R2
KATNB1
COMMD2
ZNF391
RPS15
ERCC6L2
EXO5
PAM
DHRS4
MSANTD3
TTF2
MYBPHL
TCF3
UQCR11
C11orf52
NEBL
TNFRSF9
PDE7B
SLC30A6
ZNF527
CCDC90B
YARS2
STAT1
ATP6V0E2
NOLC1
SYCP2L
ZNF142
BCS1L
RBM8A
ARID5B
RPL32
KIAA0408
C17orf75
PPP1R11
ATG101
KBTBD3
AASDHPPT
HIPK1
SLC25A28
WIZ
BAZ2A
PDSS2
PDCD6
CREBL2
MDM4
TAF15
B9D1
TMEM144
NOCT
CTSL
GRN
ZNF593
C1orf232
GOLPH3L
SF3B2
MAPK7
PARN
EXOSC5
BCKDHA
NCLN
SLC25A35
SLC29A1
MRC2
ZNF770
TMBIM6
CDK19
UTP11
PRCC
SLC35D1
CUTA
PPP2R5C
SUN1
RBM3
MRPL35