ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX391683 | CD34 Hematopoietic stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◣ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

HTR5A
RAB37
GTF3C3
PDE11A
DMAP1
NUF2
C3orf14
FRA10AC1
INTS12
GSTCD
IQSEC3
TBC1D19
KCNH1
MED23
TOP3B
XKR7
KCNJ15
SKP2
LMBRD2
SRRM3
MRPL44
EIF2D
ANK1
RAD54L2
RBBP9
COX16
PUM1
CASS4
NPAS4
CPLX2
KIAA1549
MRPS31
MRPL21
IGHMBP2
BSDC1
RBBP5
USP30
HES3
RPS7
PLEKHM3
DCAF10
TMEM242
TRIP4
MTF2
PEX3
ADAT2
ALG10B
GDPGP1
CIB1
STAC
ELOVL2
SELENOH
SAR1B
SEC13
RABGAP1
MNAT1
BNIP1
COMMD2
AURKAIP1
NCKAP1L
DRG2
R3HCC1
GLRA1
RPL37
IPO4
FAM98B
YWHAQ
TSEN15
CDK5RAP1
DUS1L
TPD52L1
TGFBR2
GTF2H2C_2
GTF2H2
DLC1
TACO1
TCF7L2
CEP72
DPY19L4
DCP1A
TTC4
M1AP
GTF2H2C
XKR4
PIP4P2
NEMF
N4BP2L2
CHGB
TMEM222
ZNF391
CRH
CUL5
CBX1
POLR3B
SLC37A2
LSG1
NSA2
GFM2
RABEP1
TTC32
STX18
SNAP25
ATR
SLC24A1
INTS14
VTA1
NMBR
CCDC130
FAM227B
DTWD1
YAP1
DNAJC6
CAMK1D
ACSL6
TEFM
SSBP1
NEGR1
RPL27
ALKBH3
RRN3
PRELID3B
COPS7B
OPA1
FAM160B1
STEAP1B
SMU1
ZNF770
CASC3
SERPINB1
SLC44A1
PXK
C17orf75
SPAAR
SFT2D3
SCGN
MRPL39
GBA
GDPD5
FEM1C
BAAT
HMGB1
USPL1
TSFM
SNAP47
JMJD4
VPS13D
CPNE4
SLTM
PRPF18
OPRM1
ADRM1
PPP6C
ZNF117
NMNAT1
LZIC
PAFAH2
CCDC88A
CLK4
KLF14
KANSL3
ALG10
SLC8A1
NDUFS7
RHOT2
ZMPSTE24
PDE1C
TPM1
TDP2
ACOT13
MRPL3
RPS20
THSD7A
POLE4
FSIP2
ACOX3
TRMT44
AKAIN1
PPP1R3C
EPS8
RTTN
STX16
ITGB3BP
EFCAB7
SLC25A51
TMCC3
TMEM41A
SLITRK1
PSMF1
NR1H3
ACP2
DSTYK
B4GALT7
GNAL
LARS2
BMS1
CALB1
ANGEL1
SCG3
JMJD1C
REEP3
RPS14
CTNNB1
CCDC97
FRG1
R3HDM2
GRIA2
TRMT5
SLC38A6
CAMK2G
EEA1
DNAJC24
DCDC1
RABGGTA
NTSR2
GPR78
NME1-NME2
NME1
CSGALNACT1
VWA8
RPS29
PDHB
EIF3E
CAPS2
MMP7
NOXA1
ERCC6L2
CLVS1
METTL9
NXPH3
NUP54
DRAP1
C11orf68
SF3A3
PPIP5K2
GIN1
MEX3C
MAN2C1
GLTPD2
COQ2
DNAJC25-GNG10
DNAJC25
AP3S2
MED4
HNRNPA1L2
SAMD4B
RAP2C
ATP10D
INO80C
ITGA4
MTMR6
MRPL40
HIRA
SUGT1
CCDC50
UTS2B
CPA6
DERA
GGACT
SREK1IP1
CWC27
ZFPM2
HUS1
PSRC1
SYTL4
WDFY1
AAR2
DUSP6
PRUNE2
MARCHF4
TTC26
TMED1
C11orf49
EXOC2
NECAP2
STOML2
SCNM1
LYSMD1
PPM1H
NOTCH2NLC
DDX18
ZNF579
DISC1
GEMIN7
ASF1A
YBEY
MCM3AP
TMEM68
TGS1
DGKZ
FAM207A
NOTCH2NLA
MOB4
SMIM13
FGFBP3
WDR36
CTHRC1
RNF6
NCOA7
PDCD6IP
NDUFC2-KCTD14
NDUFC2
EIF5A2
EDN1
ADNP
TSPAN10
NPLOC4
NDUFA4
ATXN7L2
ITGA7
ANKRD46
RUVBL1
TRDMT1
SNRPB
HOXC5
TFPT
PRPF31
POLR1F
DDX1
FUT10
MRPS14
ANKRD40
CDKN2AIPNL
ANKMY2
FAM133B
SESN1
CEP57L1
SNX19
AGK
SECISBP2L
CA2
ZNF829
ZNF568
MITD1
GLIPR1L2
PHF21A
FAM221A
TVP23B
C12orf73
GPT2
TNFAIP8L1
POLR3E
ZNF212
PLCL2
EIF2B3
ZFP30
MAPK1IP1L
TRAM1
LUC7L2
FMC1-LUC7L2
FMC1
NMRAL1
HMOX2
TOR1AIP1
NBEA
MAB21L1
WDR11
PDE4C
TYSND1
KDM3B
PDE7B
NOTCH2NLB
OTUD7A
ACSF3
SLC35A3
RPL5
ZNF783
L1CAM
KLHL20
GARS1
GTDC1
ZBTB40
SAAL1
DHRS7
RFX7
STAT3
KNL1
CXCL2
ANKRD18B
VIRMA
NCBP3
MRPL58
ARL8B
AARS2
CENPV
BIN2
PPP2R5B
PRMT3
SNRK
MRPL16
KCTD6
ZNF426
PET117
KAT14
BTG3
PCSK1
TTLL12
POMP
EPHA3
ATP5MC2
SNAPC3
GEMIN5
TOMM20L
TAMM41
NBN
TAB1
TPM3
NXPE3
FOXN3
BTN3A2
CDC73
ZSCAN12
ANKAR
MRPS18C
HELQ
CRBN
ACBD4
ZER1
ZNF501
PLCD3
GOT2
TINF2
POLM
CCDC59
CBWD1
CEP85
FAM25E
TMEM60
PHTF2
TRAF6
RAG1
ZNF609
EIF1AD
BANF1
KMT2D
SMAD5
EEFSEC
CYP17A1
STXBP3
ZNF114
GPR3
C10orf88
MTPN
LUZP6
SVOP
CCDC92B
MTIF2
PTPRCAP
SNRPB2
CCNF
MAOA
UTP3
C8orf37
CBWD5
CBWD3
WDR24
ISM1
CACNA1G
INTS5
WDR41
FOXJ3
CD47
TDRD7
AGO1
ZFP41
COMMD4
TMTC2
LGALS2
CXCL3
RHBG
ILF2
SORBS1
BRF2
PRMT5
TMEM70
VANGL2
SDHAF3
EPS15
LSM5
NFAT5
ARAP1
COA6
SPEF2
RPS15
ANKRD34C
CFAP298-TCP10L
CFAP298
CHCHD6
MTERF1
ZNF280D
VPS72
SPDYA
SLC7A6
ZNF148
CBWD6
BMP1
VAMP4
NDUFAF5
ESF1
SNX1
ZC3HC1
SLC35B1
SYNPO2
CEP164
C20orf194
GSTA4
ROBO3
FIS1
ZPBP
NOC3L
PSTPIP1
SRP9
GDAP1
C7orf26
STEAP2
SCN9A
RBM45
ARMH3
MLEC
SLCO4C1
OR1E2
SMAP2
EIF3F
RBIS
ING3
F8A3
F8A2
F8A1
CCDC150
TRMT2A
RANBP1
PPA2
STAU1
DDX27
NDUFS3
KBTBD4
TBPL1
COMMD1
RPTOR
RAD52
TUBGCP3
SLC38A2
KMT2A
NDUFAF1
BACH2
ADD2
CCAR2
CRLF3
JRK
ATP6V1B2
YPEL3
RARS1
PCID2
CUL4A
MPPED2
GTF3C5
TMBIM6
EDC4
BBS1
TIGD1
EIF4E2
GNG2
ZNF292
SMARCD1
WDR47
WDR55
NLE1
GPAM
CHD1L
PRKAB2
NOTCH2
ITGAL
SST
TPH2
TIA1
CNTNAP5
VPS4A
MAGOH
ATP1A1
PHIP
CD274
MAPK8IP2
SLC39A13
RNF103-CHMP3
RMND5A
TATDN3
NSL1
CLTC
ADARB1
HS3ST2
NFE2L2
CSDE1
SEMA3D
ZNF138
SLC45A4
PSMD6
NRF1
LRRD1
SF3B6
FAM228B
UCHL3
COMMD6
TRIM16L
GEM
RIPOR2
TMA16
WARS2
AGBL2
KDR
SMIM8
SYP
MRPL48
RTN1
P2RY6
GRM1
TUT7
AKAP13
TXLNB
ELP1
ABITRAM
TRAPPC5
FGFRL1
MTBP
MRPL13
CHRFAM7A
GPR62
NLRP1
CEP85L
SEC22B
SLC39A3
SNX17
EIF2B4
CYP20A1
KRAS
KCNK12
B4GALNT1
EPHA10
CHRM4
ATP5MC3
METAP1
SCNN1G
ZFP62
MFAP3L
MYOCD
RETSAT
MAF1
SMG5
PTCD1
CPSF4
TRMU
CACNB3
INPP1
CPPED1
DQX1
CBWD2
RBMS3
CPE
TTLL4
DTD1
KDM1A
PNPO
ALDH9A1
CCNC
NSFL1C
KDSR
LIG3
MTR
TBC1D13
BARHL1
TTC37
ARSK
HNRNPH1
ZNF562
PKIB
STMP1
LRRC10B
ZNF518A
U2SURP
OGT
DEFB124
KAT6A
PDCD2
SLC33A1
CLUL1
KIF21A
TRMT61B
MEGF8
LIG4
CSRNP1
GRAMD1C
ABHD13
REXO4
RPP14
HTD2
F8
OTUD7B
RPL38
HPCA
TPK1
DPYD
PSMG3
POLR2C
IL12A
HIF1AN
TEX261
DNAJB12
RIF1
UNC80
CHSY3
SEZ6L
STAT6
SHF
ABRAXAS2
PRKG2
FAR1
EPDR1
ZNF827
ZFYVE9
CLASP2
DPP8
CENPVL3
QDPR
GPR37
FAM118A
PLK1
METTL8
DCAF17
CEP57
FAM76B
KDELR1
ZZZ3
TFAM
TMEM101
GCFC2
PRSS27
SETD1A
MC5R
MRPL1
SMARCD2
ABCA3
CEP41
SURF6
ZSCAN25
IRF9
RNF146
RGPD5
RGPD6
RGPD8
VPS13C
FAN1
ITM2C
PDGFD
DDX46
TSGA10
C2orf15
CADM2
CLUAP1
SRFBP1
KITLG
CLTB
SIGLEC6
TMEM170A
ZNF554
B3GLCT
TMEM30B
VRK2
FABP6
LTN1
SLC26A4
MICAL3
NHEJ1
FAM50B
PSMD3
COX8A
RERG
ATG101
ARHGAP22
PTPN4
MARCHF7
NELFB
TMEM43
CHCHD4
DCP1B
ARHGEF12
BHLHE40
ARHGAP30
PGGT1B
FBXO22
YARS1
S100PBP
WDR70
MKRN2
PHB2
SFSWAP
UCHL5
RO60
IL11RA
STX8
CFAP52
OXR1
NEUROD4
PCDHGB6
RAB23
PRRC1
DDX50
MAP2
ADAM32
NARS1
CALCRL
SACM1L
RHOT1
TRPC4AP
CYB5R4
GCLM
PJA2
C19orf48
LONP2
ABCC11
PRICKLE1
COX19
STMN3
MTRES1
UGCG
NGDN
TDRKH
ZSCAN30
ZNF846
SLC2A4
SYPL1
DNM3
CRACR2A
LRRC6
SNRPD1
NFYB
GFI1B
TSC1
B4GALT6
CHMP7
AQR
SLC11A2
DNAI3
SELENOT
PCTP
ZNF730
C9orf40
GPC5
LCA5
KCTD18
ATG5
HLA-E
TCTN3
CADPS
CDK5RAP3
INO80D
CAB39L
JAKMIP2
UBAP2
LONP1
CATSPERD
ANKRD36B
DR1
ALG14
TCAF2
ADPRS
TPBGL
HDAC1
RAB30
TCHP
TANC1
TMEM167B
LTA4H
EPC1
RSAD1
PIGC
IL17D
MRPL42
DPP9
TRAM2
SPEN
VPS13B
CRKL
PDE8A
BTC
MTOR
ANKRD54
WIZ
SPINT2
GRPEL2
RAVER2
GOLIM4
RNF214
PCSK7
FAAH
BCAR3
FBXO31
PCBP2
RESF1
ERI1
ELMO1
ARHGAP24
ORC4
MBD5
ZCCHC4
DCLRE1B
AP4B1
ZNF76
ANKRD36
RILP
LRRC59
CHRNB2
SMIM12
ACBD6
ANTKMT
DROSHA
C5orf22
CLPB
LNPEP
U2AF2
CCDC69
FABP5
GNB2
FBXW8
TMEM216
SCD
TRIM45
BCKDHB
MRPS15
TRIP12
FBXO36
PDS5A
SNX12
CD300LF
CDC6
MMAA
SUGCT
MPLKIP
MAML1
FXN
MTG1
TXNRD1
GFM1
C7orf25
SPRYD7
CYBRD1
NUTF2
CENPT
ARL6IP1
ANKRD36C
CGRRF1
RPS3A
POMZP3
BUD13
EIF3G
TET3
PLEKHG4
ACCS
HSPE1-MOB4
HSPE1
HSPD1
RPS6KA6
MARCHF11
STEAP1
NSMCE4A
SFR1
ASNS
SCAF8
SPECC1L
SEZ6
ZNF354C
KPNB1
GMDS
CEP120
FUT3
SLC27A4
NCOA3
SLC19A2
LINGO2
ZNF561
DYRK4
IKZF4
TUT1
C2CD5
NDUFAB1
CYP4V2
NUS1
STXBP5L
SIRPA
B3GAT2
GALK1
C19orf12
CNOT6
USP3
ROM1
EML3
POLR2J3
SCAND1
NCAM2
MAP3K2
USP2
GINS3
AP5B1