ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FANK1
TTLL12
KLHDC4
PMAIP1
CBX1
ZNF264
PAXBP1
EEF1A1
CANT1
MRPS7
GGA3
PDXDC1
POTEH
H3-3B
NDFIP1
FAM117A
SHOC2
BBIP1
FH
ATAD2
NBPF1
CACUL1
MPZL1
ZMYM3
ZSCAN25
PHC2
MTRNR2L8
BAG3
TMEM71
PHF20L1
CYC1
UBALD2
CCDC137
RPL38
ZFP91
STX12
AHI1
USP10
GRB2
THOC3
WASHC5
NSMCE2
LEMD3
ABRAXAS2
TRAP1
CCDC30
ZMYND12
PPCS
ACSL3
CTAGE8
CTAGE4
SLF2
KIAA1549
TCF7L2
REPS1
PDCD6
SMC3
ZNF12
DDX17
MCMBP
NACC1
SMNDC1
C8orf76
UROS
BCCIP
FBRS
TNFAIP8
ABCD3
EXOC6
NME2
LOC100289561
VKORC1L1
MTRNR2L2
EIF3F
WDR43
SMAP2
KLF5
SURF4
C10orf88
ATG16L1
ATL2
CSNK2A2
UBR5
CHORDC1
ZKSCAN1
PCOTH
MIPEP
IMMP2L
PLEKHA1
ZNF652
SEC61G
DNAJB12
FBXO11
ICE1
MTMR4
SPAG9
DPP9
SEPTIN9
TEX10
DYRK3
NDUFAF6
PPA1
TACO1
C15orf40
C7orf25
TAF10
PIGF
CRIPT
SPATS2L
TSPAN10
NPLOC4
MTX2
PRKACB
BICD2
CCDC186
ST14
ABCA5
EFR3A
PKD1
LRRC47
ARHGAP11A-SCG5
ARHGAP11A
CHKB
TADA1
SERF1B
SERF1A
POMZP3
CEBPG
ABL1
MTHFD2L
WAC
MYO5C
DPP8
RPS15A
GLI4
MSANTD4
TEPSIN
NDUFAF8
SMAD5
ZNF326
EIF2AK3
SEC62
KRTAP4-11
RMDN1
WAPL
PANK2
NCBP2AS2
NCBP2
IREB2
SIN3B
ARHGAP29
DECR1
USP7
BSPRY
ARHGAP39
HIPK1
ASPH
SMARCE1
CLK1
E2F3
CCZ1
IKZF5
ACADSB
EIF3A
MSRB2
WNT16
GSTO1
SAMHD1
ZDHHC6
VTI1A
ALAS1
EHD4
PKD2
LATS1
DSCC1
PREP
RDH14
RBM42
BFSP1
POM121C
DSTN
MRPL20
C8orf33
PLEKHA3
COPG2
MROH1
ADAR
ETNK1
PIK3CA
ECE1
CASP2
VOPP1
MTDH
CLTA
SDR42E1
GAN
SUMO2
PDCD4
GPI
JMJD1C
RNASEH2C
REXO2
TBC1D30
GNS
RPL13
CACTIN
TM2D2
ADAM9
LSM6
ARF6
PDP1
RCN2
CALCOCO2
KRCC1
FNBP1
FAM234B
COL4A4
COL4A3
SLC45A4
PIGC
SCYL3
TMX4
WWP1
PDXK
ZCCHC8
RC3H2
MCAT
SLC38A2
CRLS1
RBM22
C11orf97
PIP4P1
FAM13B
GSK3A
VAMP3
SAFB2
SAFB
SBF1
MEIS3
OAT
SEC22C
SS18L2
CLTCL1
CBX2
ETS2
RECK
SMARCD2
SENP1
PFKM
PHAX
USP36
YTHDF1
SEC11C
FAM169A
ACAA1
ACOX3
TRMT44
KIAA1586
POMP
FBXO31
CCDC138
RWDD2B
DYNLL2
RBPMS
C2CD2L
MKRN1
FARP2
TESK1
FADD
RFT1
ZNF706
DUSP5
PLA2R1
PRPSAP1
TSC1
DGKZ
LEMD2
RPS27A
CLHC1
HPS6
WRNIP1
NPC1
ELOVL5
IGSF3
TPT1
ZNF623
KDM1A
ANKRD46
FAM83D
RALGAPB
MYBL1
MRTFA
TIGD2
USP33
LRCH3
GPS2
HNRNPM
RAB11B
ELOB
ANAPC7
TMEM131L
MICU3
PLEKHF2
FAM124A
NDUFAB1
MRPL38
OXR1
PRDM4
TBC1D31
RAB4A
PAWR
RGS22
NOTCH2NLB
RAB5A
EFHB
ADIPOR1
MAPKAPK5
DNMBP
TMOD3
SLC25A37
TMEM245
FERMT1
TBL2
OSBPL5
RPL7A
MED22
EXT1
ATP8B1
GJB2
RAB18
PREPL
CAMKMT
MEST
EFCAB14
AKIRIN1
PIAS4
ELOVL7
PGAM5
RC3H1
FLYWCH1
METTL23
JMJD6
ZNF775
YPEL2
TMEM160
FRG1
RUVBL1
PRELID3B
EEFSEC
UBE2Z
RAB5B
SOCS5
PGS1
INTS8
HGS
ARL16
LRRC58
PAG1
UTP18
MBTD1
RP9
DNPH1
TM9SF3
ATP2A2
ARSB
ZBTB10
OTUB1
TMCO3
DCUN1D2
PRDM2
FEM1C
COX18
SYT1
RAB6A
CXCL2
GLG1
PELI1
UBE3A
ARL8A
ABI1
ERO1A
PCNX2
PDPK1
ACVR1B
DOCK5
COBL
KRT19
ANGEL1
HERC3
ANTXR2
VPS13C
TAF5
MGRN1
RB1
ANAPC11
ALYREF
TSPAN3
RNF169
SCN8A
FANCA
CYTH1
UBE2G2
OCIAD2
MCL1
DENND10
DOCK1
SLC25A28
SUFU
BMT2
FBXO33
PM20D2
UBE2S
NF1
SLC4A7
TMEM175
GAK
CTNNAL1
EGFR
SPG11
NFAT5
TBPL1
HMGCR
NEDD1
TRAPPC3
PEX7
MARCHF6
GTSE1
UHRF2
TOB1
RPL7
RDH10
RAPGEF5
MAP7D1
P4HB
CTAGE6
ACTL8
ASF1A
TERF2
GMCL1
FDX1
RRAS2
VIPAS39
AHSA1
NAMPT
MAP3K3
YWHAH
NT5C2
APPBP2
PDIA5
DYRK1A
HSP90AA1
SLC38A10
EPS8
NOTCH2NLA
CYREN
PLEKHG1
BZW1
ZNF607
ILKAP
MFSD12
PALM2AKAP2
NFATC2IP
HNRNPAB
LGALS3
CLTC
NUDT4B
TRMU
GPN2
ZFYVE27
XPA
UBN2
LPGAT1
CLYBL
USP43
CDC25A
HSPA4
SMARCB1
FRMD5
PSME1
CDR2L
MAPK9
UBN1
GLYR1
ARFGEF1
TMEM131
ITPRIP
WASHC1
PPP1CB
NT5C3A
ITM2B
CCNT2
GFPT1
GOLGA7
CPT2
HEBP2
DENND2B
PSMG4
ALDH4A1
UVRAG
AP3D1
RPL22
URGCP
SPATA5L1
GATM
GPX1
RAD23B
OST4
MIS18A
EPB41
RAB2A
STIP1
URGCP-MRPS24
MAP1LC3B
ARHGEF35
SIRT7
CD9
ATP1A1
AGK
DYNLRB2
RNF145
LRPPRC
TOMM34
DCAF12
CNKSR3
SSRP1
PSTPIP2
SMAD1
XPNPEP1
MARK2
FAM104A
C17orf80
NHLRC2
DCLRE1A
MICOS10-NBL1
MICOS10
PDCD5
ARHGAP17
GPRIN1
GPC1
KRTAP4-12
CD81
LSM11
APEH
ACSF3
ANK2
NUDCD1
ARL5A
SMAD3
FAM86B1
C9orf85
ABHD17B
PLPP6
SART1
DENND1A
YWHAZ
CRELD1
SPATA6L
ZNF577
DHRS11
MATN2
MKI67
URB1
PLCG2
DOCK9
MORC4
POLE4
STAT3
CTNNB1
LRRC59
PARK7
SRPRB
RTN4
DNAJC1
CTPS1
PINK1
CLSTN1
NOP9
DHRS1
VRK1
ZC3H4
RALYL
TYRO3
STX1A
MTR
KLHL20
CRKL
EEF1AKMT2
OSBPL8
DERA
SCARB1
USP6NL
HSPH1
CENPC
MAGEF1
FBXL13
ARMC10
STK3
CISD3
FCHO2
TSPAN14
CXCL1
SYBU
NAF1
TPD52
ARHGEF3
MTAP
FZD6
AGTPBP1
SEMA4D
FAHD2A
SPG7
KIRREL1
TGFBR2
SOD2
WTAP
PNPO
EIF5B
VPS26C
CYRIB
MIF
NELFCD
TMEM51
TPMT
KDM1B
ANKRD28
ZCCHC14
C10orf95
MTMR12
NSD2
FKBP4
CCNJ
MTFMT
TMCO4
TRAM1
HNRNPU
FAM53B
MIF4GD
COP1
COPRS
GALNT12
SINHCAF
SBK1
FAM219B
MIEF1
RHOC
KLHL5
SDHA
CCDC127
ERRFI1
RHPN1
PTPRF
UBQLN1
LRRC37A3
ADPGK
KCTD6
C6orf226
COX6C
STAMBPL1
FUCA2
SLC26A6
EIF3B
CHAMP1
HASPIN
RNF168
STPG1
NIPAL3
EXT2
RRS1
PGM2
SCD5
ZBTB8A
HMGB1
CCDC88A
EYA1
GHITM
HACD2
CNN3
SRSF2
MFSD11
ZC3H7A
HIPK3
TNFSF9
SOCS3
ENTPD7
STMND1
ITGA3
PTPN4
FOXJ3
PHB2
ATRN
MRPL36
UNKL
RNASEH1
C22orf39
HEXB
PPP6R2
RHNO1
FOXM1
RELCH
PIGN
DBNDD1
MSH6
STX17
CNNM2
SLK
DNAJB14
ODF2
PLBD2
FAM91A1
DGKH
TICRR
TTBK2
GAS8
TADA2B
CCDC96
FAM110C
SCAND1
KDM3B
EIF2S2
B9D1
NT5DC1
MRPL12
ZNF362
IWS1
C2orf69
DEF8
KRIT1
ANKIB1
OTULIN
B4GALT4
ARPC1A
SCRN3
CIR1
PTP4A2
TRERF1
PTBP3
DUT
RBM12
CPNE1
RPL14
MRPL52
STX3
PLEKHH2
ELK3
DUSP6
NLE1
FBXW8
DESI2
NUS1
WASHC2C
QSOX1
DOCK7
ODC1
PROSER1
NHLRC3
PANK1
MLYCD
JPT1
CDCA7
COG6
NDUFV3
PRPF19
COTL1
TEAD1
PWWP3A
TANC2
COA8
BAG5
PDZD8
CCDC178
HDAC1
PRRC2B
YES1
UBFD1
EARS2
MARCHF8
FBXO42
DDHD2
DDT
RNF139
PISD
EMC8
COX4I1
TAF9
RAD17
AK6
OSBP
GATAD1
POMT2
GSTZ1
LYRM1
DCUN1D3
ROCK2
UAP1
FEZ2
RCL1
CAPN2
SLCO4A1
DPYS
MEF2D
POPDC3
IRAK2
IFT43
DSTYK
ABLIM1
SLC17A5
USP1
PSMD1
SPOPL
CCNY
NANP
EIF4H
MPP5
TBC1D5
NDRG1
FAM135A
AEBP2
NCOA2
TBXAS1
PARP8
ACADVL
HIPK2
H2AX
SH3GL2
CHD5
HSPE1-MOB4
HSPE1
HSPD1
NEK7
CELF1
GPT2
SCN11A
RANGAP1
WDR48
C1QBP
TBC1D14
ZBTB20
POLR2D
EZR
SPIRE2
PPP1R9B
TPST1
BPHL
CUX1
STIMATE-MUSTN1
STIMATE
SMC4
NEO1
DAP
MNT
ARF1
RAI1
UBAC1
ARNTL2
UBALD1
SOHLH2
TOMM22
PDCD2
UROD
MBNL1
HECTD3
RTRAF
DDX21
STXBP4
COX11
STRN
ATG2B
GSKIP
CRY2
CSNK2A1
TRIB1
ACTR5
SLC12A5
ATP13A2
ERI3
KDF1
SERINC2
TNPO1
NBEA
PKIG
DFFB
CEP104
KCTD9
CDCA2
DTD2
TBCCD1
ZBTB4
CHIC2
DLG1
IDE
THAP12
GVQW3
STRIP1
SDCBP
PPP2CA
UBE2D1
CCT2
EXOSC10
PEX2
INO80
ZNF704
ZC3H18
TJP2
STX7
ATP11A
HMGN2
AFAP1
SLX4
EIF5
SEC16A
C9orf163
CERS6
SRPK1
LOC389199
DBNL
SRP72
SETD7
SLC25A25
SH3PXD2B
TRUB2
COQ4
PPP2R5B
TMEM106B
RNF220
PAM
KIAA1958
C9orf147
NOCT
RNF19A
FAM122A
ICE2
CPOX
AGPS
ZNF134
EHBP1
BIN3
DCTN1
RBM26
KLHL9
LTV1
TKFC
DDB1
SYNJ1
MXD1
MAP4K3
GKAP1
LAMTOR1
HLF
IGF2R
SMARCA4
CSTB
CDKN1B
TOP1
AGO2
SMIM43
LDLRAP1
RAB11FIP4
KRTAP2-3
ANKRD40
CCDC126
TMEM183A
RBM17
GXYLT1
KLC2
CDC42EP4
FAM177A1
YTHDF3
RNF166
CTU2
CTSB
EZH2
PLEKHO2
SEPTIN11
PYGL
ANXA5
SH3D21
PTS
HHEX
TRAF3
RPL8
COL6A5
PPA2
RPL10A
SLC35F2
GALNT10
NCOA1
ITGB8
SLC49A4
WDR4
LINS1
ASB7
ZBTB38
SUN1
SREBF1
TMEM231
MYL5
ATP5ME
BLOC1S2
TOR1B
ZNF800