ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945294 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◣ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
HLA-DPA1
YPEL3
TRPM3
BAGE4
BAGE3
BAGE
ZNF605
BEST2
PIK3R1
PCGF3
BAAT
KSR2
KCNJ15
FAAH
NUDT4B
HTR2C
GFI1B
ZNF611
RTN1
MAP4K5
BTD
PHOSPHO1
CCDC126
KCNJ2
SLC25A38
MCC
ZNF562
FAM104B
GPR39
ITGB3BP
EFCAB7
IQSEC3
DEFB124
EDEM2
AKAP10
TKTL1
TEX28
ZCCHC8
PRKG1
C2
PROS1
UBXN2A
HIVEP3
SLC30A8
S100A4
FUT3
FRMD4A
TBC1D8
ACYP2
DPY19L2
ACTL10
TBC1D30
NPFFR2
UBE2O
AANAT
FEM1C
ZNF114
PACS1
FAM25E
ME1
ABCG1
KLF17
LOC728392
ST8SIA6
VLDLR
PGBD1
NECTIN3
PDE8A
PSMB2
LRCH1
TRAK1
LAMP3
HRH3
SLCO1B3
ANTKMT
ZNF804A
ZNF280D
TSKU
ZNF117
GOLGA6L2
THSD7A
CNKSR2
NFRKB
SWI5
GOLGA2
CEP72
ZNF426
C5orf24
TBRG1
LYPD1
DLK2
EIF4E
PRKAA2
SEPTIN11
SULF2
HCN1
DUSP6
RAB30
NOD1
SAMD5
IKZF3
SAV1
YWHAQ
HDAC2
APLN
NOS3
ZNF44
ARHGAP22
CMTM3
TMEM131
MERTK
DGKK
KCND3
KCNK3
VSTM5
EYA1
CDC42BPA
TMEM52
TSPAN14
GTF3C5
ZNF160
SLITRK4
CCND1
KCNE1
PRELP
PIP4P2
MEST
NR2F1
NIPAL1
CNGA1
EBF1
PANX1
CNTNAP3B
TACC1
SLC8A3
FSTL4
PTPDC1
NOVA1
PDE6B
MAP4K3
NTM
UBLCP1
FZD3
RNF144A
EPHA5
CLUL1
RBMS3
LY6L
FABP6
SUZ12
PLD5
TADA1
PDE2A
SEMA3D
PLOD2
ST6GALNAC4
CEP85
PAM
ZNF211
PCGF6
NCK1
ATP12A
MYRIP
SERPINF2
SPATA18
KCNIP2
EPS8L1
ESPN
LRRC45
CENPX
ZNF561
KLHL40
SLTM
MRGPRX3
CCDC74A
SPIN2B
MAGEF1
OPHN1
SLFN11
ZNF676
TMEM40
PRUNE2
ZNF860
OSBPL10
TGFB1I1
RRBP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
YAP1
LYPLA1
SH3KBP1
RIOX1
CNTNAP3
SOWAHB
NEUROD4
ADAMTS15
SCN4B
FZD1
C1QL1
FAM50B
SST
DHRS4L1
CD80
CHRNA3
BTK
ZNF496
PRRT2
ADAMTS16
ORC4
MBD5
DCTD
ARF6
KDM4E
METTL21A
FGF18
KLF3
PKMYT1
CAMSAP2
ZNF324B
FILIP1
RFWD3
RYBP
GALNT13
CCDC177
B3GNT2
SMCO4
RBPJ
TEAD4
SLC17A7
SNCB
EIF4E1B
DNAJC13
EML2
SIGLEC11
CRCT1
TMCO6
ZNF563
NEGR1
SPOPL
SSX2IP
RNF220
SUFU
ACTR1A
SATB1
POLE4
STRBP
VGLL3
UFSP2
NRSN2
NAA20
ADAMTS3
THAP4
CLSTN2
FAM102B
WDFY2
GNG2
FUT8
OLFM3
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
LXN
HIVEP1
PDE11A
PURA
PYCARD
PIK3CA
PKD2
SCUBE1
POTEF
FGD3
EEF1AKNMT
TARS3
AGGF1
SCCPDH
ATP2C1
ANHX
CDA
ZNF780B
PDE1B
NOS1
MAST2
IL1R1
ACBD5
CT45A10
FABP7
TP53BP2
RBMS1
CROCC
CAB39L
ELMO1
SETDB2
LRP8
SLC6A1
PDE4A
TMEM237
DPP6
GUCY1A1
ANO6
SEMA6D
LONRF2
NCOA7
ALAS1
TENM4
UBQLN2
ADAMTS5
SIX3
RAB6D
TDRD3
VBP1
FERMT2
GDNF
PAPSS2
SLC35A3
ART1
STX2
TRIM56
CDH10
ARID4A
ZNF888
GABRA2
LRRC2
ZNF567
GSTK1
GJC3
H2BS1
HINT1
DLG3
DMRTA1
RAB23
KCNS1
RORA
MYOD1
PXDN
CYREN
CRH
PYM1
CMPK2
NPHS2
AMACR
MARK3
RFPL3
NFE2
ACSL1
NR2F2
FAM240C
NUPR2
GSTA4
CNPY3
MTFR1
PLXNA4
RCAN1
HERC6
OSBPL1A
GPC5
SCHIP1
SORCS2
PCDHAC2
POTEE
GMFB
PTPRN2
ATXN7L1
ALDH7A1
PTH1R
MTIF2
F8A3
F8A2
F8A1
TAS2R4
CMYA5
HP1BP3
NLK
NEXMIF
SLC27A2
DHRS2
GALK2
CCL3
BCL6B
OTUD7A
THEG
IQGAP2
GPR50
ERVW-1
SNURF
SNRPN
RPS6KA2
LCORL
BBX
MAEA
RIPOR2
ATP23
UACA
IKZF1
RGS7BP
PAH
ASCL1
ZC3H14
C3orf80
NRG1
NFATC2
RNF128
PPP1R2B
BEND7
GDA
ST8SIA2
PARM1
SHB
FAM98A
PABPC3
RHOXF2B
RHOXF2
ROCK1
GNL3L
CTSB
TLK1
PCDHAC1
H3Y2
CAMK1D
CADM2
PIK3C2B
PLAAT2
PIAS3
CNOT6
SLC9B1
C9orf85
ABHD17B
WDFY3
DUSP16
RGMB
GRAMD1C
TMEM60
PHTF2
SLC50A1
PCDH19
CBLL1
PREP
ADAMTS2
SLC27A3
NDST3
GLI2
CCDC74B
STARD3NL
ZFYVE21
XRCC3
SNX33
DAZL
RBX1
SP6
PPIC
PRDM1
CHST4
MED12L
DMRT3
OTUD6A
NDRG4
DCLRE1B
AP4B1
SNRNP25
POLR3K
TBC1D15
RNF130
SPAG5
ZNF778
ADCY5
DMRTB1
FAM171B
MEIS1
ZNF623
FANCF
RAB6C
EGLN1
TMEM164
QSOX1
BECN2
PCDHGB6
EPHX1
IRX3
DYNC2I1
PCDHGB1
ITGA7
AHCYL2
CCL28
JMJD1C
REEP3
GOLGA8A
NCAM2
ZDHHC22
PLXND1
NPNT
HAPLN4
ZNF468
RABGAP1L
TSNARE1
CDH2
PPP1R1A
TUBE1
FAM229B
NSMCE4A
SDC2
IGFBP3
PAXBP1
XKR4
QSOX2
ABI2
ASCL5
TEX13C
EXT2
PLAAT5
ZC4H2
GALR1
CAMK2N1
KBTBD3
AASDHPPT
SPIN4
MBNL1
CAMK2D
ENTPD1
SCMH1
LMX1A
LOXHD1
PROSER1
NHLRC3
RALYL
APBB2
FAM174B
SMAD3
SOX11
BSDC1
MTRNR2L8
RABGAP1
MTRNR2L2
NUF2
RBBP5
MTF2
CBX1
GBA
CAT
MAPRE2
RPS7
ARHGAP39
DMAP1
ZFP30
SAMD4B
AURKAIP1
SF3A3
SSBP1
COX16
TBC1D19
SELENOH
CCDC130
FRA10AC1
RPS29
TRIP4
PEX3
ADAT2
RPL27
HTR5A
COMMD2
MED23
TMEM242
C3orf14
TTC32
DNAJC25-GNG10
DNAJC25
DSTYK
ACOX3
NPAS4
LUC7L2
FMC1-LUC7L2
SUPT7L
SLC4A1AP
SLC24A1
INTS14
RBBP9
TTLL12
TRMT44
DCP1A
EIF2D
ZMPSTE24
INTS12
GSTCD
NME1-NME2
NME1
SLC33A1
CLTB
NDUFS7
TACO1
STX18
RPL37
POLR3B
CALCRL
LSG1
MNAT1
TEFM
GTF2H2C_2
ZSCAN31
TMEM41A
DRG2
STC1
RPS14
GTF3C3
HMGB1
KDM3A
NEMF
DNAJB12
UTP3
ZNF829
ZNF568
CCDC59
RTTN
PPIP5K2
GIN1
GTF2H4
ALG10B
GTF2H2
STX16
PAFAH2
ATP5MC2
WDR11
SKP2
LMBRD2
TFPT
PRPF31
AP3S2
REXO4
SAR1B
INTS5
GTF2H2C
VTA1
NMBR
USPL1
GABPB2
RAD54L2
MOB4
MTR
DPY19L4
KANSL3
RERE
SLC25A51
STAT3
KDM1A
FMC1
ATF7IP
MRPL44
NDUFB3
FAM126B
ILF2
IPO4
PUM1
DISP1
EIF3F
TOP3B
TOR1AIP1
TTC26
TRMT5
SLC38A6
ZNF408
ARHGAP1
DCAF10
SLC44A1
CFAP298-TCP10L
CFAP298
MRPL40
HIRA
MRPS31
TTI2
CDK5RAP1
PPP6R1
INO80C
TATDN3
NSL1
EPRS1
ZNF391
POLR2J3
SNAP47
JMJD4
FAM227B
DTWD1
MRPL21
IGHMBP2
MITD1
TSEN15
PSMF1
NR1H3
ACP2
WDR36
MRPS18C
HELQ
COX7A2
CCNC
TBL1X
CCDC97
KMT2A
OPA1
TMEM43
CHCHD4
SNRPB
SMG5
PPIG
BMS1
NSA2
GFM2
GLIPR1L2
C8orf37
MRPL48
SMG8
RGPD1
COPS7B
ATR
NBPF1
FAM133B
NUP54
MRPL1
BRF2
TDP2
ACOT13
WDR74
PDCD6IP
EIF1AD
BANF1
USP30
XKR7
AARS2
BNIP1
SNIP1
FRG1
TRUB2
COQ4
CLK4
MTBP
MRPL13
CCDC88A
RNF187
COPS4
ZSCAN25
N4BP2L2
SF3B6
FAM228B
ZNF292
KLHL20
RUVBL1
TSFM
TUT1
GTPBP3
PLEKHM3
CDC73
SCNM1
LYSMD1
DUS1L
CEP85L
DDX18
ATP1A1
TMED1
ALKBH3
NSFL1C
RGPD2
LSM5
DHX16
NOP16
HIGD2A
SMU1
TMA16
NECAP2
FAM98B
COA6
RPL5
SNX17
EIF2B4
RBM45
TMEM222
ZSCAN22
TTLL1
TGFBR2
POLDIP3
MRPS23
FAM160B1
ALG14
LRP6
WDR55
PUS10
PEX13
FGFBP3
CLTC
VPS13B
LOC102724265
ZSCAN30
CPPED1
ALG10
SCAND1
PDE7B
SUGCT
MPLKIP
EIF3E
HSPE1-MOB4
HSPE1
HSPD1
C17orf75
HEATR1
SNRPD1
R3HCC1
PIH1D2
NKAPD1
SMIM13
DRAP1
DHTKD1
C11orf68
ACTL8
DPP9
C10orf88
DDX1
CCNI
CENPV
SDHAF3
GRPEL2
RNF6
SREK1IP1
CWC27
ZBTB45
TTC4
COPS2
RPS15
PRPF18
SEC13
ISY1-RAB43
ISY1
NUP107
TMEM101
HAX1
TPK1
RPS3A
CEP120
TMEM259
ANK1
ITFG2
INO80B
ATG4C
SMARCD2
MRPS14
SLC35B1
PHIP
SOD2
CYP17A1
CRKL
CLASP2
MRPL3
MAN2C1
GNAL
HUS1
MED18
APRT
SNRPB2
METTL9
BCAR3
SMG7
CCDC107
SESN1
B4GALT7
SRP9
AASDH
NOL12
RNF125
NDUFS3
KBTBD4
ZNF165
CUL5
PRELID3B
DNAJC24
DCDC1
IRF9
PDGFD
ERCC6L2
POLR3E
PES1
NBN
LARS2
TSPAN10
NPLOC4
CHD1L
KRR1
CASC3
SERPINB1
CHMP7
NDUFA4
TPR
ODR4
ZBTB40
DNAJC6
UBOX5
FASTKD5
VIRMA
CASS4
SEC22B
RABGGTA
C18orf21
STOML2
CDIPT
RIF1
MEMO1
SEC23B
SLC45A4
POLG
THOC5
HLA-E
ZNF770
ZCCHC4
MTOR
MAPK1IP1L
TIGD1
RPS26
EIF4E2
FAM13A
ZNF76
TMEM132A
RPS20
CLUAP1
NMNAT1
LZIC
MRPS33
GARS1
TMBIM6
FAM234A
POLM
DCT
CCAR2
TRAF6
RAG1
ATP5MC3
ZNF571
ZNF540
ABCA3
PSMD3
ZMYM5
CCDC150
CEP57L1
CGGBP1
ADRM1
CBWD5
ATP10D
UIMC1
RAB18
SRRM3
CFAP20
MRPL39
CTNNB1
PRKAB2
RMND1
ARMT1
TMEM68
TGS1
ANKRD40
NDUFAF1
MMACHC
CCDC163
BANP
TRMT61B
ANKRD54
DNAJC11
DDX41
KMT2D
POLR1F
CCDC174
SNRPE
MRPL42
COG2
FUT10
WTAP
QRICH1
FAM207A
RPL38
MAGOH
NDUFC2-KCTD14
NDUFC2
EIF2B3
ADPRS
DDX46
SNRPD3
GUCD1
MRPL16
ZNF609
TMEM208
LRRC29
ZKSCAN2
SLC39A3
THG1L
RPTOR
GPAM
SUGT1
NCBP3
AHCYL1
C11orf49
SACM1L