ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX366173 | NCI-H441
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◣ SRX366173: NCI-H441

◢ SMAD4: STRING

SERPINE1
JUNB
HOOK2
KDM6B
PMEPA1
TBC1D22A
COL7A1
UVSSA
GIP
LTBP2
DNAJB5
BIRC7
CST6
GPR182
USP35
KCTD21
ERCC1
ASIC3
SMAD7
GAL
KPNA7
MYL10
CGB5
CGB8
CGB7
LPCAT1
CLTB
MYEOV
ITGAE
PROC
CXCR5
LAMB3
B3GNT6
IFT140
CRAMP1
VPS28
SLC39A4
PKP1
ZBTB38
PLEK2
ASB6
TMEM95
KCTD11
ACLY
SDR9C7
TTLL2
PDE6A
RHOD
INPP4B
RNF223
PDGFB
SHISAL1
ASB2
OSM
TNIP1
DVL1
LAMC2
ARHGEF18
WNT7B
MDFI
UPK3BL2
SPDYE2B
SPDYE2
SLC18A3
CHAT
KANSL3
S100A2
SMIM35
CGB2
CGB1
PIK3CD
MYOM3
CLDN14
CRTC1
BLOC1S2
DHRS3
ETS2
TGFBI
AMHR2
HPS4
FAM170B
KCNK9
GLIS3
STK33
PALD1
EGR3
UPK3BL1
IRF2BP1
GJB5
GJB4
SFT2D3
CLDN4
MYBPH
CHI3L1
HMGA1
CLCF1
MAP2K3
PPP1R13L
POLR1G
PAPLN
PDXK
AQP3
TRIB1
C12orf42
NPR2
GOLGA6C
CELSR1
GOLGA6A
PLEC
BMF
PITPNM3
MTMR11
CAMK2N1
ID1
ZNF212
RAB37
FOXS1
PLEKHA7
KLHL35
LAPTM5
NEURL1B
SKI
SLC25A45
FRMD8
RHBDL3
ACOT11
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
GOLGA6D
CRYAA2
CRYAA
ZFAND2A
PRRX2
NDUFS8
MTRNR2L8
KCNK3
PTPRB
TTLL8
WSB2
TCF7
STX1A
FLNC
ANXA8
FAM25G
FAM25C
ERFL
SLC12A7
F13A1
LOC100509620
FAM83G
MYT1
PNRC2
TAGLN2
PPL
INAVA
ARAP1
C5orf46
PIEZO1
HS3ST2
MAPK13
NECTIN4
ENG
BEAN1
ZG16B
FHL2
NIBAN2
DPH2
B4GALT2
ATP6V0B
IER3
FLOT1
MARCHF10
YTHDF1
RRAD
CIAO2B
CES2
CDH16
TNK2
PPP2R2C
NT5C
UBL4B
DENR
ZNF331
CRIP2
ANAPC11
ALYREF
LAMA5
ABR
TRIM55
ST14
PTPRE
HBEGF
CREB3L2
LOC100130520
CD300H
MICAL3
ISG15
RND1
HES4
KANK4
UBE2L3
RIMBP3C
RIMBP3B
CYP27C1
FZR1
DOHH
OLFM2
CRCP
ANGPTL4
ITGA5
TNFSF10
H2BU1
H2AW
ANXA8L1
LBH
TNS1
INSIG1
FER1L6
RXRA
BMP8B
PEDS1-UBE2V1
PEDS1
IL17B
COL16A1
SLC19A1
ABCC3
PNPLA5
EIF4E
ITGB6
EXT1
NEDD4
NAPRT
MROH6
MLXIP
DNAJB2
BEST3
RUNX1
FPR3
CTXND2
EPB41
BHLHE40
CTNNA1
QPCT
GOLGA6B
NFATC2
IVL
NRCAM
YOD1
S100P
PFKFB2
SRP14
SPRR1B
ABLIM3
SPRR2D
CSF1R
C11orf86
ANKLE2
BCAR1
LOC102724265
LDHAL6B
LTBP3
TTC6
FOXA1
GRAMD4
TSPAN4
TMEM147
POLR2L
CRACR2B
CD151
ATP4A
RHOF
ZBTB7B
TFF1
LENEP
SMAD3
MAP3K9
SNED1
PDE4C
ACTBL2
NLRX1
CPA4
BMP8A
AGAP1
RBPJ
CDKN1A
ZC3H12A
APOBEC3A_B
APOBEC3A
INPP5A
CCDC197
ZSWIM1
SPATA25
SH3BP4
NEURL2
CTSA
CDH26
BOK
OR2AT4
PDCD6IP
RGS19
OPRL1
LKAAEAR1
TUFT1
KCNG2
ELOF1
ADA
ACP5
PDLIM7
SF3A3
FHL3
MSANTD3
AHNAK2
SHCBP1L
SLC19A2
SCT
FERMT1
DRD4
CDHR5
PSMD2
NOL4L
SFN
ADGRG1
CARD10
EHD1
CXXC5
TNFRSF1A
C1QTNF6
TM4SF19
SPINK1
PALLD
SLC49A3
MYL5
ATXN1
SREBF1
FAP
WNT9A
HTR1D
GALNT10
TMIE
MEAK7
FBLN2
ALS2CL
SMG9
STK40
ADAM19
RABL2B
GPATCH3
SREK1IP1
NR0B2
GZMM
CWC27
CLSTN1
CDC34
CCNI
CDHR2
MPP1
VGF
AP1S1
MMP10
PAQR9
PANX1
SYT12
LDOC1
KRT16
ITPRIP
KRT17
HPCAL1
SPDYE1
MET
LAMA3
IRF2BP2
CCDC57
ALOX5AP
RUNX3
POU4F2
DNAH1
LOC100505841
TIMP2
ATG16L1
ATP13A2
FAM131A
ASB5
NSMCE1
TACR2
LOC388282
SLC39A7
RXRB
RING1
HSD17B8
S100A10
CCDC71L
CCDC182
SLC7A6
HRH1
DHRS12
ATP6V1FNB
ATP6V1F
LRP5
PRKAG2
CD109
LOC100287896
LIPT2
NOS3
UPP1
SPTBN2
RIN3
RAB26
PKD1
PRDM12
P4HA3
CCDC88B
AGTR1
PITPNM2
RELA
CPNE5
BCL9L
TEX12
IL18
IL13RA1
SPACA6
STRA6
PVR
PHC2
TAF1L
RABL2A
CD248
ZNRD2
VASN
POU3F2
GEM
ITGB5
CHST11
UBL4A
SLC10A3
PCYOX1L
LAGE3
ID2
LHB
CGB3
SFTPB
PSG5
HMOX1
ADSS1
PDE2A
TEX46
KDM1A
MAST4
RCC1
MDK
LINGO3
DMPK
COL9A3
CHRM4
BASP1
VIM
PLA2G2E
PPP1R14B
PLCB3
MSANTD2
LOC114841035
FKBP2
ESAM
ANO1
REN
IL21R
NDST1
MEIOB
BCAN
IKZF3
R3HDML
PDE9A
NR1D1
CMIP
C19orf33
ARAP2
RUFY4
KRTAP2-4
KRTAP2-3
DRGX
DLC1
C10orf62
DRAP1
C11orf68
PIK3IP1
MTFP1
TTC9
SPAG9
SLC6A19
GPR68
NPAS4
TRIM29
PCDHGC5
PCDHGC4
GSTA4
CEBPE
IGSF9B
CCN4
DDX47
AGXT2
MAMDC2
TSC22D4
RNF112
NYAP1
ATP2A2
POLD4
ART4
FSCN1
FAM184A
VIP
TRAPPC3
S1PR5
PIGC
METRNL
MAP7D1
LARP1
KEAP1
C1orf105
ALDH3B1
RAD9A
PRKCZ
ZNF653
HSF5
HIP1R
GNAL
CHMP1B
PHRF1
ZFYVE21
XRCC3
D2HGDH
CTSV
CRISPLD2
AGFG1
USP2
BAIAP2
MFSD12
KCNQ4
FAM102A
PAWR
ARL14
TRIOBP
CSRNP1
RAMP1
CACNA1I
GADD45B
FAM180A
ECH1
AKR1C1
NEK6
CCL20
KRT7
PDE4B
SULT2B1
TSC2
SLC9A3R2
NTHL1
GSN
VGLL3
SYNRG
GUCA2A
PKD1L2
CAV3
MTRNR2L2
MSH3
DHFR
SIRT6
JDP2
ZNF165
OR1F12
RTL9
SYT8
SLC4A2
PPCDC
CDK5R1
CDK5
C1orf116
CAPN2
ARHGEF5
SLC37A2
NOX4
JPT2
ENKUR
ECSCR
DUX4
VSIG8
RARRES1
PLEKHG3
MICALCL
PRKAB2
CHD1L
ZBTB11
RPL24
SRI
MELTF
LTO1
IDS
ITLN2
THAP4
MTMR1
CORO6
GNPNAT1
NREP
KRT79
KCNMA1
SUCLG2
ETV3L
ADAMTS16
CDCA4
GPR31
FAM83A
PAQR8
KIAA0930
PRLH
KCNE4
RIPOR3
TNFRSF11A
RNF126
PSCA
JRK
GFRA4
GADD45G
EIF1AD
BANF1
LPIN1
GZF1
PTK2B
EPHA2
DOT1L
RAB24
PRELID1
MXD3
FURIN
DUSP1
ASCC2
WNT7A
PHYHIP
ODAPH
NPB
GULP1
RBM27
SLC1A7
KLHL30
CSNK1D
MTHFR
EMP2
CLCN6
TSKU
KANK1
MRPL2
KLC4
CUL7
WDR54
C2orf81
RASSF5
MYH9
TGM2
SVIL
OR2A42
LGALS13
LEP
KRT80
SNN
MEFV
MDM4
CPEB2
ANPEP
TES
SEPTIN9
CHRNA9
KIFC3
SPNS2
ASAP1
ANKRD1
SCN4A
CPNE7
AQP1
AKR1C2
ANK1
HGS
ARL16
AMZ1
ARHGAP22
TFAP2C
SP140
SP110
GPR39
GLIS2
FAM89B
EHBP1L1
TCTEX1D4
PLK3
BTBD19
RASGRF1
RGS20
OSBPL7
LSP1
CTAGE8
CTAGE4
ARHGEF35
JMJD1C
ART1
IGFBP3
OR10H5
CITED2
SLCO5A1
XCR1
TMIGD3
SLC9A3R1
SH3BP5L
NUDT4
ARID3A
APP
SBF1
TAX1BP3
EMC6
PTK2
NPTN
MUC4
LAT
KIF5A
DCTN2
MAFK
MBOAT2
RIN1
BRMS1
SPAG4
FAM107B
OBP2B
MIDEAS
EEF1E1
UQCRHL
TMEM184A
SMIM29
OVOL1
ITPKC
COQ8B
TFPI
SULT1A4
SULT1A3
ACOT7
RALGDS
PYGB
GCC1
FSCN3
CD22
ARF5
SLN
KRT19
MUC20
TNS3
BTBD3
FGF1
GCGR
INF2
BAK1
SLC35E2A
SIRT7
PCYT2
DLX4
PRR14
FBRS
MLLT11
CDC42SE1
ROBO4
MUC5AC
HOMER2
ENTPD8
ELFN2
CD55
CABP4
PRXL2B
P2RY2
TMEM106C
PRDM11
MT1X
IL6R
ZNF354A
TRAF7
ABCG1
STAM2
IVNS1ABP
AXL
PDZK1IP1
PSRC1
KRT78
EPS8L2
EMP1
DEAF1
CDV3
PLAU
LIMS2
SYNE3
GPR17
HTRA1
PRKAB1
CD44
PAGR1
MVP
KIF13A
CFAP65
COPS8
RNF213
SPRR2E
EHMT1
ARRDC1
SYTL3
LY6K
DYNLT1
RAPGEF1
PLEKHN1
PERM1
KDM7A
CEACAM18
ALDH1A3
RAP2B
PKP3
GINS3
CACNA1B
KRT8
ZNF710
XAGE1B
XAGE1A
ITPRIPL2
FOXP1
TMCC1
VSX1
IGF1
DCST2
DCST1
OLIG1
MAP3K14
NR1H3
ACP2
VDR
EPPK1
ALDH1B1
TF
RDH5
CD63
TPD52
HOXA5
HOXA4
HOXA3
FOXL1
DUSP7
AGAP3
FABP6
ADRA1B
PSG2
TUBB6
PTTG1IP
DBNL
DAGLA
MAB21L4
CROCC2
IL15
LPAR3
DDX60L
ADAM8
PADI1
TRIM62
SLC9A5
FHOD1
SPATA12
FNIP2
KLF7
LEKR1
TCEAL1
OR10J1
NRARP
LAD1
ELF3
AGPAT2
GTPBP6
SPAAR
HRCT1
SPSB1
SLC30A2
DUSP22
CCR7
TRIM2
TMEM145
PLSCR2
MEGF8
LRP11
CAPN15
FADD
GLIPR1L1
CAPS2
DDI2
FTL
BAX
PFKP
C2CD2
SMIM32
OCIAD2
TCEA2
SOX18
MTRNR2L1
FRG2C
SKIL
LAPTM4B
SIRT1
PITX2
TBC1D1
LOC102724770
DGCR6
FRG2
LURAP1L
MAN1A2
VKORC1
BCKDK
TGIF1
TUBG1
RETREG3
IL20
KLHL31
MMP20
ZNF148
LIMS1
F2
GP9
TEX45
PEX11G
AVEN
DLX3
NUP205
RNF103
BMPER
DIAPH3
SULT1C4
SLC7A5
SERPINE2
DIXDC1
LMNA
LOXL1
PATJ
VAC14
GRAMD2B
KIF5C
SYNPO
PLN
NODAL
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
DMAC1
TMUB1
FASTK
GAD1
ZC3H3
GSDMD
SMYD3
DISP1
ID3
LRRC61
ACTR3C
DTNA
MRPL24
ASPN
SLC8A1
GAB1
UBAP1
C11orf91
PHLDB2
ANKRD34B
FSTL3
TTC39B
MYO6
RASGRP3
GALNT11
AFAP1
RPGR
ZNF703
CASZ1
MIS18BP1
NDE1
MARF1
RNF214
PCSK7
TNFRSF10A
HOXC9
HOXC10
ZNF76
OTUD7B
WBP1L
FDXACB1
CMTM6
C11orf1
ALG9
IKZF5
ACADSB
PRRG2
NOSIP
ROR2
ME3
LAMC3