ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

EAPP
CCDC200
WDR74
STX5
ZBTB4
SLC35G6
POLR2A
TMEM107
LOC102724770
DGCR6
PARP16
TSEN34
DUX4
POLDIP3
TAF12
TRPC1
HEXIM1
C12orf65
ZNF143
GTF2A1
DNAJA1
APTX
NUDT15
SLC38A2
MCL1
BTG1
HSP90AB1
KDM4A
PARP2
CCNB1IP1
H4C3
H1-6
RPLP0
GCN1
SRSF7
EIF4G2
PCIF1
ID4
EIF2AK3
DNAJB1
C6orf62
RPL5
FUS
NARF
CYBC1
TEDDM1
SRSF3
PABPC1
GLUL
LRCH4
HERPUD1
FBXO24
STX10
IER2
ZBTB37
GSK3B
H4C12
H4C11
H2BC14
H2AC14
TGOLN2
HNRNPH1
SPTAN1
FAM174C
CIRBP
PRDX1
H3C6
H2BC8
H2AC8
H1-3
H1-2
CSRNP2
SLC25A25
CALM1
KANSL2
UQCC3
LBHD1
CSKMT
C11orf98
MRPL35
IMMT
CCN2
TRA2B
CLSPN
PNRC2
SRSF5
RAB26
TRAF7
RPL3
TMBIM6
KNTC1
UBE2S
SIRT4
OAZ1
HNRNPA2B1
CBX3
MKNK2
MYLIP
FOS
ARL15
SNRNP70
VCL
AFF1
JUNB
FSCN1
NAGK
ARF4
ANKRD17
DDAH1
CCN1
SETD5
RPS11
RPL13A
DUSP1
SESN2
MICU2
ZFAND5
VPS26C
SECISBP2
CKS2
RPS12
POLR3D
HSPA5
TTI2
FAM168B
RPL12
PRKRA
PJVK
LRSAM1
JPT1
HSPA1B
CYTH2
SRSF6
POLG2
DENND6A
DDX5
IER5L
FAM53C
CDC25C
KDSR
MTHFD2
UNK
HMBS
H2AX
DPAGT1
SRSF2
MFSD11
H3-3B
TOB1
SFPQ
HEATR5A
CSE1L
ADAMTS1
PFKFB3
UBE2Z
ZNFX1
UBC
NXF1
TUFT1
ZNF529
ACTL6A
RAD23A
CALR
IER5
FARSA
HEXIM2
SOCS1
ARL6IP1
SKP1
TRA2A
MAT2B
NDRG1
DDX59
COQ10B
ID2
VAMP1
ZCWPW1
RPLP1
PPP1R35
MEPCE
DNAJC25-GNG10
DNAJC25
JUND
CTNNB1
IQCN
TAF8
MRPS18B
CCND3
ATAT1
TMEM18
H2AZ1
DNAJB14
KIF2C
USP42
SREK1
NUDCD1
KRT19
UBR4
TMEM258
PTPN6
NASP
KRT15
FEN1
C12orf57
L3HYPDH
JKAMP
KMT2E
S100A1
S100A13
CHTOP
H2BC15
H2AC15
TBL3
RPS2
RPL3L
RNF151
NDUFB10
MAK16
EEF1A1
DDX1
SIRT1
KLF7
TNFAIP1
IFT20
HNRNPC
BRD2
ARRDC3
UBB
TJP1
SDCBP
KAT7
EEF2
ZNF207
TSSK4
TAF1D
TAF15
MDP1
CHMP4A
C17orf75
C11orf54
OAT
MAPK1IP1L
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
CLTC
LUC7L
GNG14
FAM234A
DHPS
CALM2
SLC39A10
NABP1
MBD6
JUN
IFRD1
DDIT3
AMD1
USPL1
HMGB1
MORF4L1
KIF27
KANK1
GADD45B
UBE2D3
RHOB
MAT2A
HDAC4
RBM14-RBM4
RBM14
ZNF865
ZNF524
TM2D1
PDIA3
LGMN
FIZ1
TMSB4X
ZSCAN31
PGAP2
RPS20
EIF4A2
TAX1BP3
EMC6
WDR1
EMSY
FAM3C
WSB1
BAIAP2
LBH
GNAS
ZNF248
PPIA
POR
PITRM1
SLC3A2
RRBP1
SEPTIN2
INTS6
HDLBP
H3C12
H2BC17
H2AC17
H1-10
CENPBD1
BAMBI
H2BC21
H2AC21
H2AC20
FTL
ING1
CYP20A1
CARS2
RPS27
RAB13
C5orf24
USP48
PPIL3
NIF3L1
CENPC
ATF4
MEX3D
HSPA8
FER
DNAJB5
PARK7
SMIM14
GPR89B
STK17A
LIMS1
TMEM242
GADD45G
RBM7
CREBZF
C11orf71
ACTB
FN1
GAPDH
TMEM230
PCNA
CDS2
STPG3
FAM166A
YWHAQ
TUBB4B
SERTAD2
SLC35C2
PLAG1
CHCHD7
TNRC6B
AMOTL2
ARIH1
YTHDC1
PLK2
H4C2
H3C2
H2AC4
GTPBP8
EIF5
ARSD
LUZP1
RBM12
CPNE1
BBC3
SARAF
UBAP2
CBX5
WAC
PPP1R15A
PLEKHA4
HNRNPA1
ARHGEF7
ZNF326
STMN1
LUC7L3
ISCA1
EIF1
CYB561D1
ATXN7L2
TSC22D1
THAP5
P4HA1
HNRNPAB
DNAJB9
AKIRIN2
RCC1
IL6ST
JMJD1C
TSPYL2
TMEM263
MAP3K2
RUSF1
SLC7A5
ERRFI1
TPI1
SPSB2
SDHAF2
CPSF7
ARHGAP35
AP2S1
UAP1
UHRF1BP1L
CAMSAP2
PIK3R3
ZNF24
SLC16A1
EHD1
RBM25
MPP5
FRS2
FAM200B
DDX50
FDXACB1
C11orf1
ALG9
NREP
ZC3H10
TP53BP2
RPL41
FEM1C
PTPN14
POMZP3
KIF5B
DAB2
ACSL3
HNRNPA0
CELSR3
NFKBIZ
GPATCH3
CCNG1
SPTSSA
PAIP2
GPN2
ARHGAP19
H4C9
H2BC11
H2AC11
CNN3
H3C4
H4C4
H2BC6
H2BC12
H2AC12
CDK12
CCT2
DESI2
USO1
CCNT2
C19orf48
MMADHC
H2BC5
H1-4
IVNS1ABP
TUBA1C
USP40
PHRF1
POLR2J3
PDCD4
AZIN1
HMGA1
MRTFA
MATR3
ZC3H6
NBEAL1
CCNB2
NDEL1
ATL2
HMGN2
SULT1A4
SULT1A3
SLX1B
SLX1A
NFYC
ETNK1
BOLA2-SMG1P6
BOLA2B
BOLA2
ZNF766
PIK3C2A
KLHDC2
ABI2
TXNRD1
TMSB10
SFR1
SLC36A4
SLTM
H4C5
H2BC7
H2AC7
SLC20A1
TSC22D2
VIM
PHACTR2
TPT1
HNRNPDL
ENOPH1
ID1
MKLN1
SDCBP2
CLU
KRT8
XBP1
RPS6
EXT1
LSM14A
ZNF518A
RPN1
RNF220
ITFG2
COL1A1
ELMOD2
MTRNR2L1
SMAD7
PMEPA1
FRG2C
SKIL
LAPTM4B
PRKAB2
CHD1L
MTRNR2L2
MSH3
DHFR
PITX2
TBC1D1
COPS8
BIRC7
DHRS3
FRG2
LURAP1L
SERPINE1
MAMDC2
MAN1A2
VKORC1
BCKDK
CRTC1
MTRNR2L8
TGIF1
ASIC3
RBPJ
TUBG1
RETREG3
IL20
KLHL31
MMP20
ZNF148
ITGB5
F2
H2BU1
H2AW
GP9
ETS2
HOOK2
TEX45
PEX11G
ERCC1
AVEN
TNIP1
DLX3
NUP205
RNF103
PDLIM7
BMPER
COL7A1
SPACA6
CD44
DIAPH3
SULT1C4
KDM6B
SERPINE2
USP35
PROC
DIXDC1
LMNA
PRR14
FBRS
LOXL1
PATJ
VAC14
HTRA1
GRAMD2B
KIF5C
SYNPO
PLN
NODAL
AGAP3
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
DMAC1
TMUB1
FASTK
OLFM2
GAD1
ALDH1B1
ZC3H3
GSDMD
SMYD3
DISP1
ID3
LRRC61
ACTR3C
DTNA
LAMB3
MRPL24
ASPN
SLC8A1
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
GAB1
TRIB1
UBAP1
C11orf91
PHLDB2
ANKRD34B
PDGFB
FSTL3
TTC39B
MYO6
RASGRP3
GALNT11
SMG9
AFAP1
RPGR
ZNF703
CASZ1
MIS18BP1
NDE1
MARF1
DNAJB2
RNF214
PCSK7
TNFRSF10A
HOXC9
HOXC10
NEURL1B
ZNF76
OTUD7B
SMAD3
ARHGAP22
WBP1L
CMTM6
IKZF5
ACADSB
PRRG2
NOSIP
ROR2
ME3
LAMC3
CST6
CDK5RAP2
ANXA8L1
PPP3R1
TBC1D22A
MTIF2
HCAR3
HCAR1
ARHGEF16
UBE2T
THEM4
PPP1R12B
RFPL4B
PPP1R13L
POLR1G
PDXK
TLE2
PEDS1-UBE2V1
PEDS1
STRA6
ECHDC3
CLDN14
SNX9
LEFTY2
PRR29
ICAM2
UMODL1
RAB12
GIP
C15orf39
BCL10
INSYN2A
ANK2
ABLIM1
FNIP2
BRD7
YPEL5
EPB41L1
STAM2
TOGARAM1
KLHL28
HDGF
LTBP2
TRIOBP
TGM4
AADAT
TMEM95
KCTD11
LRRC31
ART1
METTL17
RICTOR
LOC389199
KTN1
REN
FOXN3
CCPG1
C15orf65
TCTEX1D4
PRKCI
PLK3
BTBD19
TYRP1
RNF213
PAX6
GPR63
ASB6
C1QTNF7
TMEM63A
LEFTY1
FAM172A
NFKBIL1
DDX39B
ATP6V1G2
MYADM
BMF
TRIM2
GID4
ATPAF2
LIMK1
GPR182
FMN1
CHIC2
THAP9
SEC31A
KCTD21
SCAPER
PTPRN2
SNX25
CFAP97
TDGF1
LRRC2
RARA
PDLIM1
TSKU
STMN3
RTEL1
SMARCD3
ALOX5AP
FOSL2
YTHDF1
ART4
ZNF540
TTI1
RPRD1B
DACH1
EP400
ASB5
BCAT1
NOTCH2
MCTP1
TMEM229B
MMP10
CCDC33
PITPNM2
TAGLN2
ASS1
CGB5
ARAP1
PTPRB
PSMD2
CENPA
CTCF
TOMM20
FRMD5
FHL2
DSP
PLCXD3
PIWIL4
UVSSA
GNB2
BMPR2
RBM27
SCD
PELO
ITGA1
AMPD1
HPS4
ZBTB38
EPB41
SSBP3
ZNF341
CAV1
PLAGL1
EPS15
GPR1
CYP2B6
CSRNP1
NPM3
FGF8
FPR3
ACOX2
CORO2A
BHLHE40
NOTCH2NLA
KPNA7
SMARCD1
ASIC1
SREBF1
CHRNA9
TM4SF1
SCX
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
TMTC4
XRN2
B3GNT6
E2F3
BIN2
DENND2B
INPP4B
FGF17
DMTN
SPRED2
MTHFD1L
FLRT2
DGAT2
LRRC71
SNX18
MYL10
ENTPD6
DAAM1
TGFBI
ZNF571
COA7
SERPINB2
LAMC2
MS4A10
SCARF1
RILP
LIMK2
STOX2
KAT5
DYRK4
DERL3
ITGAE
ST3GAL4
LNX1
AGO1
FBXO32
RIC1
ALDH18A1
GATA4
PLA2G10
ITPKC
COQ8B
MUC3A
PLS1
TECR
PLAU
MRPL2
MOXD1
KLC4
CUL7
CXCR5
ABCC3
ZMIZ1
USP2
SRSF10
ZNF592
WNT7B
KCTD7
GATM
GAB2
MACO1
HOATZ
BTG4
ANGPTL4
EOMES
TNK2
RRM1
OVCA2
ITGB6
VPS28
CGB2
CGB1
CEP55
CCDC88A
ZNF212
GLIPR1L1
CAPS2
ANKLE2
TFPI
NPFFR2
HOPX
KLHL5
BMPR1B
EPSTI1
FDFT1
ACLY
HMGB2
PSD3
NUP153
LAMA5
DVL1
ZMPSTE24
TMCO2
MYEOV
NSMCE1
ARID3B
CLIP3
C1orf100
MYBPH
GAL
CHI3L1
TMPRSS11D
SLC2A2
DCTN4
BRAP
ACAD10
BEST3
NAIF1
GLIS3
CAMK2A
ARSI
UPK3BL2
SPDYE2B
SPDYE2
SLC35A4
APBB3
NOTCH2NLB
PF4V1
CXCL1
FST
RAB11FIP3
CABP7
TVP23B
FOXS1
UBR5
CCDC24
ARHGEF18
LTBP1
SPDYE1
SIRPA
CGB8
CGB7
ACOX3
PCNX2
MRPS16
PKP1
ALOX15B
SERTAD4
CER1
WDR36
LPCAT1
PLXND1
CLTB
DOCK2
SYTL2
BET1
SIAH1
NFIC
CLCF1
LPCAT2
SLC39A13
WARS2
CLCN5
CHST3
ELAPOR2
SMARCA5
GNE
DCAF10
ZBED6
CDCA4
IGF1
MFNG
AGFG2
WT1
TPRN
SSNA1
ANAPC2
MYT1
SLC35F2
ILKAP
BACE1
ZSWIM5
UTP18
MBTD1
ZFR
PRSS53
PHC2
CPT2
USP30