ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957405 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◣ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

FRG2C
SIRT1
DUX4
FRG2
TGIF1
DLX3
TUBG1
RETREG3
MAMDC2
H2BU1
H2AW
THEM4
KLF4
KDSR
MAN1A2
INSYN2A
SNX25
CFAP97
NFKBIL1
DDX39B
ATP6V1G2
RICTOR
LOC102724770
DGCR6
STRA6
FAM172A
PRRG2
NOSIP
MTRNR2L1
PDGFB
CD44
RNF103
LURAP1L
CCPG1
C15orf65
ARHGEF16
RBPJ
LOXL1
EPB41
HOXC9
HOXC10
OVCA2
KMT5B
PRKAB2
CHD1L
SNX16
MUC3A
BRAP
ACAD10
CMTM6
MTRNR2L2
MSH3
DHFR
DNAJB1
TECR
PDIK1L
TMEM242
PHLDB2
UBE2T
PPP1R12B
IL20
IKZF5
ACADSB
TOGARAM1
KLHL28
SKIL
OAZ1
PEAK3
PRR29
ICAM2
ZNF540
ZNF571
CPT2
CENPA
TMEM263
ID2
PRR14
FBRS
DERL3
TBC1D7-LOC100130357
TBC1D7
ART1
MACIR
SARAF
PDLIM7
TLE2
AVEN
UQCRB
COPS8
SP4
TMED9
B4GALT7
LRRC31
SIAH1
LMO4
DNAJB4
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
LMNA
DYNLL2
LAPTM4B
TBC1D1
BMPER
SERP1
EIF2A
TPRN
SSNA1
ANAPC2
DECR1
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
TEX45
PEX11G
GNB2
SLC8A1
REV3L
CASZ1
NUDT4B
AGAP3
TMUB1
FASTK
CCDC200
DCAF10
AFAP1
LOC389199
SELENOO
ITGB5
ID3
KAT6A
C11orf91
P4HB
ARHGDIA
TM4SF1
NFIC
BCL10
KMT2A
ZNF592
MFNG
C2CD4C
BET1
SLC38A9
CNOT1
MMP10
ZNF341
FOXN3
ZBTB45
SLC27A5
NTMT1
CDKN2AIP
LENG8
C9orf50
METTL17
SLC25A25
NAIF1
TMTC4
CPNE2
CALM1
AXL
PIWIL4
ZNF609
GRIA4
PDPR
FKBP1A
TINAGL1
E2F3
ST3GAL4
KLHL31
PAGR1
MVP
PRRT2
MAZ
LRP6
SCD
CALM2
CLTC
NEDD9
SRARP
HSPB7
CLCNKA
SCX
ID1
GTF2B
ZFP37
ANKRD34B
ASB8
LHX2
GAB1
ME3
RABEP1
SLC39A13
LPCAT3
DNAJB6
CCDC88A
STX4
MEIS2
KLF12
OTUD7B
ZRSR2
SLC2A14
IL6
PTEN
KLLN
JMJD1C
FLRT2
DAAM1
METTL11B
NR1H3
ACP2
TTC30B
RNF139
SYNPO
FOXP1
KIAA0232
ZC3H3
GSDMD
KCNN3
RCOR3
PELO
ITGA1
ZC3H6
NFAT5
RRM2B
MYLK3
TRIM2
MTF2
KBTBD2
ZNF217
PPP6R1
PDF
NIP7
COG8
SMARCD3
UCKL1
UNKL
C16orf91
H3C4
H4C5
H2BC7
H2AC7
FCHSD2
ZADH2
TSHZ1
KMT2B
CTNNB1
RAD23A
CALR
NOTCH2NLA
ABCC3
PANK2
FDXACB1
C11orf1
ALG9
MAFK
PAWR
ZNF148
CLCN5
DSTYK
MED23
ENPP3
UBE2E1
PXK
DCP1A
FABP3
FAT4
SIL1
CHMP5
BAG1
TEX46
KDM1A
KLHL24
KDM6B
VANGL2
WTIP
RAD54L2
PHF3
ZNHIT1
PLOD3
ELF2
LAMB3
SMAD7
PMEPA1
PITX2
BIRC7
DHRS3
SERPINE1
VKORC1
BCKDK
CRTC1
MTRNR2L8
ASIC3
JUNB
MMP20
LIMS1
F2
GP9
ETS2
HOOK2
ERCC1
TNIP1
NUP205
COL7A1
SPACA6
DIAPH3
SULT1C4
SLC7A5
SERPINE2
USP35
PROC
DIXDC1
PATJ
VAC14
HTRA1
GRAMD2B
KIF5C
PLN
NODAL
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
DMAC1
OLFM2
GAD1
ALDH1B1
SMYD3
DISP1
LRRC61
ACTR3C
DTNA
MRPL24
ASPN
TRIB1
UBAP1
FSTL3
TTC39B
MYO6
RASGRP3
GALNT11
SMG9
RPGR
ZNF703
MIS18BP1
NDE1
MARF1
DNAJB2
RNF214
PCSK7
TNFRSF10A
NEURL1B
ZNF76
SMAD3
ARHGAP22
WBP1L
ROR2
LAMC3
CST6
CDK5RAP2
ANXA8L1
PPP3R1
TBC1D22A
MTIF2
HCAR3
HCAR1
RFPL4B
DNAJB5
PPP1R13L
POLR1G
PDXK
PEDS1-UBE2V1
PEDS1
ECHDC3
CLDN14
SNX9
LEFTY2
UMODL1
RAB12
GIP
C15orf39
ANK2
ABLIM1
FNIP2
BRD7
YPEL5
EPB41L1
STAM2
HDGF
LTBP2
TRIOBP
TGM4
AADAT
TMEM95
KCTD11
KTN1
REN
TCTEX1D4
PRKCI
PLK3
BTBD19
TYRP1
RNF213
PAX6
GPR63
ASB6
TNRC6B
C1QTNF7
TMEM63A
LEFTY1
MYADM
JUND
BMF
GID4
ATPAF2
LIMK1
GPR182
FMN1
CHIC2
THAP9
SEC31A
KCTD21
SCAPER
PTPRN2
TDGF1
LRRC2
RARA
PDLIM1
TSKU
STMN3
RTEL1
TRA2B
ALOX5AP
FOSL2
YTHDF1
ART4
TTI1
RPRD1B
DACH1
EP400
ASB5
BCAT1
NOTCH2
MCTP1
TMEM229B
CCDC33
PITPNM2
TAGLN2
ASS1
CGB5
ARAP1
PTPRB
PSMD2
CTCF
TOMM20
FRMD5
FHL2
DSP
PLCXD3
UVSSA
BMPR2
RBM27
DDAH1
CCN1
AMPD1
HPS4
ZBTB38
SSBP3
CAV1
PLAGL1
EPS15
GPR1
CYP2B6
CSRNP1
NPM3
FGF8
FPR3
ACOX2
CORO2A
BHLHE40
KPNA7
SMARCD1
ASIC1
AMOTL2
SREBF1
KANK1
CHRNA9
PLCXD2
TLR1
SPATS2L
IVNS1ABP
XRN2
B3GNT6
BAMBI
BIN2
DENND2B
INPP4B
FGF17
DMTN
SPRED2
MTHFD1L
DGAT2
LRRC71
SNX18
MYL10
ENTPD6
TGFBI
COA7
SERPINB2
LAMC2
MS4A10
SCARF1
RILP
LIMK2
STOX2
KAT5
DYRK4
ITGAE
LNX1
AGO1
FBXO32
RIC1
ALDH18A1
GATA4
PLA2G10
ITPKC
COQ8B
PLS1
PLAU
MRPL2
MOXD1
KLC4
CUL7
CXCR5
ZMIZ1
UAP1
USP2
SRSF10
WNT7B
KCTD7
GATM
EAPP
GAB2
MACO1
HOATZ
BTG4
ANGPTL4
EOMES
TNK2
RRM1
ITGB6
VPS28
CGB2
CGB1
CEP55
ZNF212
GLIPR1L1
CAPS2
ANKLE2
TFPI
NPFFR2
HOPX
KLHL5
BMPR1B
EPSTI1
FDFT1
ACLY
HMGB2
PSD3
NUP153
LAMA5
DVL1
ZMPSTE24
TMCO2
MYEOV
GADD45B
ZBTB4
SLC35G6
POLR2A
NSMCE1
ARID3B
CLIP3
C1orf100
MYBPH
GAL
CHI3L1
TMPRSS11D
SLC2A2
DCTN4
BEST3
GLIS3
CAMK2A
ARSI
UPK3BL2
SPDYE2B
SPDYE2
SLC35A4
APBB3
NOTCH2NLB
PF4V1
CXCL1
FST
RAB11FIP3
CABP7
TVP23B
FOXS1
UBR5
CCDC24
ARHGEF18
LTBP1
SPDYE1
SIRPA
CGB8
CGB7
ACOX3
PCNX2
MRPS16
PKP1
ALOX15B
SERTAD4
CER1
WDR36
LPCAT1
PLXND1
CLTB
DOCK2
SYTL2
CLCF1
LPCAT2
WARS2
CHST3
ELAPOR2
SMARCA5
GNE
ZBED6
WSB1
CDCA4
IGF1
AGFG2
WT1
MYT1
H4C9
H2BC11
H2AC11
SLC35F2
ILKAP
BACE1
ZSWIM5
UTP18
MBTD1
ZFR
PRSS53
PHC2
USPL1
HMGB1
USP30
OSGIN2
S100A2
AHCYL1
SLAIN1
NBL1
MDFI
RAB28
MDN1
ISG15
LRRC37A3
MTNR1A
HAUS7
KLF10
IRF2BP1
CREB3L2
C11orf42
ITLN2
RFTN1
PSKH1
NRN1L
MBD1
MDC1
KANSL3
FAM118A
IFT140
H2BC21
H2AC21
H2AC20
CRAMP1
BEAN1
ACP6
SLC39A4
VWA5B2
ZNRF3
FBXO3
DRAP1
C11orf68
RHOF
PLEK2
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
ANK3
MYOZ2
IFNA8
NUMB
OCA2
SF3A3
TMPRSS9
SERPINB8
NAV2
ITPRIP
DDX47
APC
TAF12
STK33
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LOXL2
LEMD3
CEP57L1
AGPS
SDR9C7
NOL4L
RGS10
LOC100287896
LIPT2
GJB5
GJB4
GAS2L1
BPGM
TTLL2
PDE4B
PDE6A
ARMC9
CHST11
TMEM87B
RHOD
CSF2RB
ANXA8
STEAP2
NEDD4L
SLC6A15
F2RL1
ABR
KLF7
KLRD1
SFT2D3
SERINC2
BRIX1
ZG16B
VDAC1
WDR54
UNC50
COA5
C2orf81
HNRNPM
BMP5
SPON2
HEXB
PNRC2
RUNX1
SOWAHC
SEPTIN10
GATAD1
SLC46A3
TBXAS1
SRSF6
IDO2
PPP1R15B
MINDY3
UQCRHL
TEAD1
B4GALT6
RNF223
TUFT1
GNAL
DSC3
ZNF792
C12orf42
PGK1
CDKN1A
PRKACB
POU5F1
NDEL1
GCH1
FMN2
SHISAL1
ASB2
ZNF655
SLAMF1
MARCHF5
FAM200A
CPEB3
ABTB2
VPS36
SLC39A7
RXRB
RING1
MAP3K2
HSD17B8
GSC
CKAP2
POU2F3
MYL6B
KCTD1
HK2
EXT1
TNPO1
EPG5
NOS1AP
HMGA1
KRT36
KRT13
CTPS1
NPAS4
CARD17
ATP13A2
STK38L
OSM
MAP2K3
PRMT5
ST3GAL2
OBSCN
GTPBP6
FZD9
MCM7
AP4M1
PHF19
FHL3
NRCAM
NPR2
FSD1L
UBE2B
H2AZ1
DNAJB14
CELSR1
CDKL3
WDR74
STX5
IL17B
AKT2
PTGIS
ZSWIM4
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
GOLGA6A
ETS1
FXYD6-FXYD2
FXYD6
CHN2
CDH26
TMED8
SAMD15
LOC100505841
AFAP1L1
ZZZ3
SLC36A2
PIK3R6
ARMC7
SPTBN1
IL17RD
GADD45G
FSCN1
TUSC1
RAB17
CCNI
ANK1
SLC18A3
PRDM14
CSF3R
CHAT
TRAPPC3L
SPATA9
SERHL2
RHOBTB3
IGFBP7
IFI35
FGF1
CALHM4
DUSP1
POLD4
KRT80
LOX
C5orf46
BORCS5
SMIM35
AK3
SIK3
ATP5IF1
ZNF575
GPR183
ETHE1
CYP27C1
NEDD4
C1orf74
DNMT3B
COMMD7
UHRF1
SHC4
PIK3CD
CRYAA2
CRYAA
BAIAP2
AMPD3
NUAK1
ZBED2
VWA3B
SRP14
FAM184A
ZNF189
PPP1CB
NOTCH3
MRPL50
BAAT
AKIRIN2
STX1A
KCNF1
GOLGA6D
TSEN34
MYOM3
NDST2
ARHGAP24
WWC2
VOPP1
TADA1
CD8A
PDE2A
CABLES1
ACSS3
UBE2D3
FOXJ3
L3HYPDH
JKAMP
CXADR
LRP5
BLOC1S2
PCED1B
LRTM1
CREB5
ARL4A
AMIGO2
C2orf16
TSN
NIFK
NARF
CYBC1
CNNM1
JCAD
NKG7
ETFB
CLDND2
VDAC2
LBH
PLLP
EIF1AD
BANF1
IER3
FLOT1
CCN2
ZNF460
AMHR2
DYRK2
MYOM1
ITGB1
ZFP36L2
FAT1
TACC2
NSMCE4A
KRTAP21-3
RASL10A
BCL11B
SUCLG2
LRP12
FAM170B
PAQR9
OSBPL9
MATN2
KCNK9
FZD6
COMMD1
ARHGAP39
HS3ST2
HNRNPA2B1
CBX3
CALD1
ARL13B
TSPAN9
PURA