ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702095 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◣ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PRKAB2
CHD1L
LOC102724770
DGCR6
ID1
ZNF655
FAM200A
STAM2
OCA2
MTRNR2L2
MSH3
DHFR
COPS8
DUX4
MTRNR2L8
KANK1
ID3
SMAD7
PRR14
FBRS
PTPRN2
SPACA6
OLFM2
ARIH2
MARCHF5
CPEB3
LIMK2
ZNF148
ST3GAL2
CDK5RAP2
CCDC7
FDXACB1
C11orf1
ALG9
CDH15
PMEPA1
ID2
SKIL
BAMBI
RFPL4B
RNF11
MTIF2
SRSF6
MTRNR2L1
ZBTB4
SLC35G6
POLR2A
SREBF1
UAP1
HDDC2
RARA
EP400
GLIPR1L1
CAPS2
ERCC1
BCAP31
ABCD1
RBMS1
LOC100287896
LIPT2
SSBP2
TRIQK
DGAT2
LRRC37A3
CSRNP1
SMYD3
C5orf46
KLF10
CUL4A
PCID2
SF3A3
FHL3
ASIC3
FBXL13
ARMC10
EAPP
CAPRIN2
TCTEX1D4
PLK3
BTBD19
APPL2
MTHFD1L
ZNF664-RFLNA
ZNF664
CCDC92
HERPUD2
VDAC1
METTL15
KIF18A
ERRFI1
ZNF713
ZNF697
GGA1
CALM1
OBSL1
INHA
AFAP1
MDC1
TUBB
GNAL
CHMP1B
POLD4
TRDMT1
CAPN15
P2RX6
DDAH1
CCN1
THAP11
NUTF2
CENPT
SLIT2
TAF12
NDRG2
SYN2
RCL1
TPPP2
RNASE13
RAD21L1
LEMD3
SNX14
SKP1
MSX2
TYRO3
IKZF2
MAPKAPK3
CISH
XPOT
CCDC88A
UQCC3
LBHD1
CSKMT
C11orf98
PLXND1
TSEN34
E2F3
VAMP1
KTN1
CCDC200
LPCAT3
TRIM65
MRPL38
RBM18
MRRF
UBE2D2
ZNF34
RPL8
TEAD1
SFR1
GABPA
ATP5PF
BHLHE40
KLHL5
OTUD7B
PSMD14
TIPARP
KRAS
JUND
IQCN
FRG2C
LAPTM4B
SIRT1
PITX2
TBC1D1
BIRC7
DHRS3
FRG2
LURAP1L
SERPINE1
MAMDC2
MAN1A2
VKORC1
BCKDK
CRTC1
TGIF1
RBPJ
TUBG1
RETREG3
IL20
JUNB
KLHL31
MMP20
ITGB5
LIMS1
F2
H2BU1
H2AW
GP9
ETS2
HOOK2
TEX45
PEX11G
AVEN
TNIP1
DLX3
NUP205
RNF103
PDLIM7
BMPER
COL7A1
CD44
DIAPH3
SULT1C4
SLC7A5
KDM6B
SERPINE2
USP35
PROC
DIXDC1
LMNA
LOXL1
PATJ
VAC14
HTRA1
GRAMD2B
KIF5C
SYNPO
PLN
NODAL
AGAP3
TMEM268
DMAC1
TMUB1
FASTK
GAD1
ALDH1B1
ZC3H3
GSDMD
DISP1
LRRC61
ACTR3C
DTNA
LAMB3
MRPL24
ASPN
SLC8A1
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
GAB1
TRIB1
UBAP1
C11orf91
PHLDB2
ANKRD34B
PDGFB
FSTL3
TTC39B
MYO6
RASGRP3
GALNT11
SMG9
RPGR
ZNF703
CASZ1
MIS18BP1
NDE1
MARF1
DNAJB2
RNF214
PCSK7
TNFRSF10A
HOXC9
HOXC10
NEURL1B
ZNF76
SMAD3
ARHGAP22
WBP1L
CMTM6
IKZF5
ACADSB
PRRG2
NOSIP
ROR2
ME3
LAMC3
CST6
ANXA8L1
PPP3R1
TBC1D22A
HCAR3
HCAR1
ARHGEF16
UBE2T
THEM4
PPP1R12B
DNAJB5
PPP1R13L
POLR1G
JMJD1C
PDXK
TLE2
PEDS1-UBE2V1
PEDS1
STRA6
ECHDC3
CLDN14
SNX9
LEFTY2
PRR29
ICAM2
UMODL1
RAB12
GIP
C15orf39
BCL10
INSYN2A
ANK2
ABLIM1
FNIP2
BRD7
YPEL5
EPB41L1
TOGARAM1
KLHL28
HDGF
LTBP2
TRIOBP
TGM4
AADAT
TMEM95
KCTD11
LRRC31
ART1
METTL17
RICTOR
LOC389199
REN
FOXN3
CCPG1
C15orf65
PRKCI
TMEM263
KDSR
TYRP1
RNF213
PAX6
GPR63
ASB6
TNRC6B
C1QTNF7
TMEM63A
LEFTY1
FAM172A
NFKBIL1
DDX39B
ATP6V1G2
MYADM
BMF
TRIM2
GID4
ATPAF2
LIMK1
GPR182
FMN1
DNAJB1
CHIC2
THAP9
SEC31A
KCTD21
SCAPER
SNX25
CFAP97
TDGF1
LRRC2
PDLIM1
TSKU
STMN3
RTEL1
TRA2B
SMARCD3
ALOX5AP
FOSL2
YTHDF1
H3C4
ART4
ZNF540
TTI1
RPRD1B
DACH1
ASB5
BCAT1
NOTCH2
MCTP1
H4C5
H2BC7
H2AC7
TMEM229B
MMP10
CCDC33
PITPNM2
TAGLN2
ASS1
CGB5
ARAP1
PTPRB
PSMD2
CENPA
CTCF
TOMM20
FRMD5
FHL2
DSP
PLCXD3
PIWIL4
UVSSA
GNB2
SLC25A25
BMPR2
RBM27
SCD
PELO
ITGA1
AMPD1
HPS4
ZBTB38
EPB41
SSBP3
ZNF341
CAV1
PLAGL1
EPS15
GPR1
CYP2B6
NPM3
FGF8
FPR3
CALM2
ACOX2
CORO2A
NOTCH2NLA
KPNA7
SMARCD1
ASIC1
AMOTL2
CHRNA9
TM4SF1
SCX
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
IVNS1ABP
TMTC4
XRN2
B3GNT6
BIN2
DENND2B
INPP4B
FGF17
DMTN
SPRED2
FLRT2
LRRC71
SNX18
MYL10
ENTPD6
DAAM1
TMEM242
TGFBI
ZNF571
COA7
SERPINB2
LAMC2
MS4A10
SCARF1
RILP
STOX2
KAT5
DYRK4
DERL3
ITGAE
ST3GAL4
LNX1
AGO1
FBXO32
RIC1
ALDH18A1
GATA4
PLA2G10
ITPKC
COQ8B
MUC3A
PLS1
TECR
PLAU
MRPL2
MOXD1
KLC4
CUL7
CXCR5
ABCC3
ZMIZ1
USP2
SRSF10
ZNF592
WNT7B
KCTD7
GATM
GAB2
OAZ1
MACO1
HOATZ
BTG4
ANGPTL4
EOMES
TNK2
RRM1
OVCA2
ITGB6
VPS28
CGB2
CGB1
CEP55
ZNF212
ANKLE2
TFPI
NPFFR2
HOPX
BMPR1B
EPSTI1
FDFT1
ACLY
HMGB2
PSD3
NUP153
LAMA5
DVL1
ZMPSTE24
TMCO2
MYEOV
GADD45B
NSMCE1
ARID3B
CLIP3
C1orf100
MYBPH
GAL
CHI3L1
TMPRSS11D
SLC2A2
DCTN4
BRAP
ACAD10
BEST3
NAIF1
GLIS3
CAMK2A
ARSI
UPK3BL2
SPDYE2B
SPDYE2
SLC35A4
APBB3
NOTCH2NLB
PF4V1
CXCL1
FST
RAB11FIP3
CABP7
TVP23B
FOXS1
UBR5
CCDC24
ARHGEF18
LTBP1
SPDYE1
SIRPA
CGB8
CGB7
ACOX3
PCNX2
MRPS16
PKP1
ALOX15B
SERTAD4
SARAF
CER1
WDR36
LPCAT1
CLTB
DOCK2
SYTL2
BET1
SIAH1
NFIC
CLCF1
LPCAT2
SLC39A13
WARS2
CLCN5
CHST3
ELAPOR2
SMARCA5
GNE
DCAF10
ZBED6
WSB1
CDCA4
IGF1
MFNG
AGFG2
WT1
TPRN
SSNA1
ANAPC2
MYT1
H4C9
H2BC11
H2AC11
SLC35F2
ILKAP
BACE1
ZSWIM5
UTP18
MBTD1
ZFR
PRSS53
PHC2
USPL1
HMGB1
CPT2
USP30
OSGIN2
S100A2
KMT2A
AHCYL1
SLAIN1
NBL1
MDFI
RAB28
MDN1
ISG15
MTNR1A
HAUS7
IRF2BP1
CTNNB1
CREB3L2
CPNE2
C11orf42
ITLN2
RFTN1
MAFK
PSKH1
NRN1L
MBD1
KANSL3
FAM118A
IFT140
H2BC21
H2AC21
H2AC20
CRAMP1
BEAN1
ACP6
SLC39A4
VWA5B2
ZNRF3
FBXO3
DRAP1
C11orf68
RHOF
PLEK2
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
ANK3
MYOZ2
ZNF609
IFNA8
NUMB
DECR1
TMPRSS9
SERPINB8
NAV2
ITPRIP
DDX47
FAT4
APC
STK33
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LOXL2
CEP57L1
AGPS
SDR9C7
NOL4L
RGS10
GJB5
GJB4
GAS2L1
BPGM
TTLL2
PDE4B
PDE6A
DNAJB4
ARMC9
CHST11
TMEM87B
RHOD
CSF2RB
ANXA8
STEAP2
NEDD4L
SLC6A15
PANK2
F2RL1
ABR
KLF7
NTMT1
KLRD1
SFT2D3
SERINC2
PAGR1
MVP
BRIX1
ZG16B
WDR54
UNC50
COA5
C2orf81
PEAK3
HNRNPM
CNOT1
BMP5
SPON2
HEXB
PNRC2
MACIR
RUNX1
SOWAHC
SEPTIN10
GATAD1
SLC46A3
TBXAS1
KAT6A
IDO2
PPP1R15B
METTL11B
MINDY3
UQCRHL
B4GALT6
RNF223
CDKN2AIP
TUFT1
DSC3
ZNF792
SP4
C12orf42
PGK1
CDKN1A
PRKACB
POU5F1
NDEL1
GCH1
FMN2
SHISAL1
ASB2
SLAMF1
AXL
ABTB2
VPS36
SLC39A7
RXRB
RING1
MAP3K2
HSD17B8
GSC
CKAP2
POU2F3
FOXP1
MYL6B
KCTD1
HK2
EXT1
TNPO1
EPG5
NOS1AP
HMGA1
KRT36
KRT13
P4HB
CTPS1
ARHGDIA
NPAS4
CARD17
ATP13A2
STK38L
OSM
MAP2K3
PRMT5
OBSCN
GTPBP6
FZD9
MCM7
AP4M1
PHF19
NRCAM
NPR2
FSD1L
UBE2B
H2AZ1
DNAJB14
CELSR1
CDKL3
WDR74
STX5
IL17B
AKT2
PTGIS
ZSWIM4
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
GOLGA6A
ETS1
LENG8
FXYD6-FXYD2
FXYD6
CHN2
CDH26
TMED8
SAMD15
LOC100505841
AFAP1L1
ZZZ3
SLC36A2
PIK3R6
ARMC7
SPTBN1
IL17RD
GADD45G
FSCN1
TUSC1
RAB17
CCNI
ANK1
SLC18A3
PRDM14
CSF3R
CHAT
TRAPPC3L
TBC1D7-LOC100130357
TBC1D7
SPATA9
SERHL2
RHOBTB3
IGFBP7
IFI35
FGF1
CALHM4
DUSP1
ASB8
NEDD9
KRT80
LOX
BORCS5
SMIM35
PPP6R1
AK3
SIK3
ATP5IF1
ZNF575
GPR183
ETHE1
CYP27C1
NEDD4
C1orf74
DNMT3B
COMMD7
UHRF1
SHC4
PIK3CD
CRYAA2
CRYAA
BAIAP2
AMPD3
NUAK1
ZBED2
VWA3B
SRP14
FAM184A
ZNF189
PPP1CB
NOTCH3
MRPL50
BAAT
AKIRIN2
STX1A
KCNF1
GOLGA6D
FCHSD2
MYOM3
NDST2
ARHGAP24
WWC2
VOPP1
TADA1
CD8A
PDE2A
CABLES1
ACSS3
UBE2D3
FOXJ3
L3HYPDH
JKAMP
CXADR
LRP5
BLOC1S2
PCED1B
LRTM1
CREB5
ARL4A
AMIGO2
C2orf16
TSN
NIFK
NARF
CYBC1
CNNM1
JCAD
NKG7
ETFB
CLDND2
VDAC2
LBH
PLLP
EIF1AD
BANF1
IER3
FLOT1
CCN2
ZNF460
AMHR2
DYRK2
MYOM1
ITGB1
ZFP36L2
FAT1
TACC2
NSMCE4A
KRTAP21-3
RASL10A
BCL11B
RAD23A
CLTC
CALR
SUCLG2
LRP12
FAM170B
SLC2A14
PRRT2
PAQR9
OSBPL9
MAZ
MATN2
KCNK9
FZD6
COMMD1
ARHGAP39
HS3ST2
HNRNPA2B1
CBX3
CALD1
ARL13B
TSPAN9
PURA
SPTAN1
PLXDC2
KANK4
EML1
UQCRB
HSP90AB1
ETAA1
RAB26
PRRT1B
GTF2B
ZNF720
NOCT
MAPK13
IL6
GPR37L1
SPRR1B
LRP6
BEX3
ANGPTL3
AFF1
POU2F2
PALD1