ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957485 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◣ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

DUX4
SIRT1
LAPTM4B
LOXL1
TBC1D1
MAN1A2
FRG2C
INSYN2A
VAC14
LURAP1L
DLX3
NUP205
KLHL31
DHRS3
GRAMD2B
IL20
TGIF1
RBPJ
DIAPH3
MTRNR2L1
TUBG1
RETREG3
GALNT11
PLN
PATJ
TEX45
PEX11G
GP9
ALDH1B1
ITGB5
F2
LIMS1
RNF103
VKORC1
BCKDK
DIXDC1
SLC8A1
PRRG2
NOSIP
MCTP1
TOGARAM1
KLHL28
ZZZ3
AVEN
CMTM6
SULT1C4
HCAR3
HCAR1
ARHGEF16
THEM4
RASGRP3
LOC102724770
DGCR6
H2BU1
H2AW
MMP20
C11orf91
LRRC31
TNFRSF10A
FRG2
DISP1
TNIP1
RNF214
PCSK7
CCPG1
C15orf65
TMEM268
PIWIL4
MAMDC2
ANXA8L1
PRR29
ICAM2
ZNF703
PPP3R1
METTL17
ZC3H3
GSDMD
ANKRD34B
FOXN3
CTCF
DERL3
LNX1
CD44
SERPINE2
E2F3
CCDC33
KCNN3
SERPINB8
SYNPO
HOXC9
HOXC10
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
ZNF76
IKZF5
ACADSB
AADAT
FAM172A
PLCXD3
LMNA
MMP10
BET1
C15orf39
MIS18BP1
LIMK1
SNX25
CFAP97
GAB1
MYO6
BCL10
TMEM263
FDFT1
ZNF609
RICTOR
CORO2A
ME3
FNIP2
MYADM
ASB8
REV3L
RAB12
SCX
SPATS2L
DNAJB1
AMOTL2
TECR
DTNA
PDLIM1
PRKCI
SLC38A9
UBE2T
PPP1R12B
CNOT1
PANK2
KCTD7
ECHDC3
RRM2B
PDLIM7
ABLIM1
CENPA
XRN2
AHCYL1
COPS8
DNAJB4
CASZ1
MBD1
LRRC61
ACTR3C
ARHGAP22
TGM4
STMN3
RTEL1
PHLDB2
KDSR
FLRT2
CPNE2
KTN1
PLXDC2
ARL13B
KMT2A
CDK5RAP2
PEDS1-UBE2V1
PEDS1
LOX
RPGR
RHOBTB2
LAMB3
MRPS16
GAD1
TLE2
DMAC1
RIC1
SCD
SCARF1
RILP
NAA80
IFRD2
HYAL3
GNB2
BRAP
ACAD10
TAGLN2
NDE1
MARF1
HOATZ
BTG4
SPTBN1
TTYH1
ZNF540
TMTC4
ZNF571
TENM3
DSP
DAAM1
NFKBIL1
DDX39B
ATP6V1G2
SKIL
BIN2
PLS1
PHF19
TDGF1
LRRC2
ABCC3
CAMK2A
ARSI
AVIL
C1QTNF7
AMPD1
TVP23B
CTNNB1
MACO1
REN
TNRC6B
JCAD
RBMS2
SFXN2
ARL3
FOXJ3
BIRC7
FMN1
CABP7
TMEM123
AGAP3
TMUB1
FASTK
GPR63
SEC62
ZNF764
CRTC1
UBAP1
ITPRIP
SERPINE1
ENTPD6
FBXO46
ZMPSTE24
TMCO2
LNPEP
WDR36
ZNF148
ASPN
OTUD7B
PELO
ITGA1
PSKH1
NRN1L
RET
ANK2
NUDT4B
CSF3R
TM4SF1
COL3A1
PRKAB2
CHD1L
TLR1
HSPH1
FSTL3
WSB1
YPEL5
LRRC71
RAD23A
CALR
SERPINB2
TPRN
SSNA1
ANAPC2
CSF2RB
DGKD
UMODL1
NUP153
NUMB
NOL4L
FSD1L
BPTF
RFPL4B
TBC1D7-LOC100130357
TBC1D7
C2orf16
ARHGAP10
FRMD5
EPS15
RAB28
H2AZ2
PDS5B
RBM27
MOXD1
ZNF592
UBR5
TMED9
B4GALT7
SPDYE1
ANK3
TRAPPC3L
CALHM4
ZNF217
PMEPA1
ART4
MYL6B
MED23
ENPP3
BRIX1
CXADR
CDKN2AIP
KLF11
ASB5
COA7
STEAP2
PHYHD1
STPG3
FAM166A
UBE2F
NELFB
CHRNA9
DECR1
LENG8
FBXO3
FAT4
DSTYK
SRSF10
SARAF
SETD6
DOCK9
MSANTD1
BPGM
SMARCD1
ASIC1
GAB2
SLC35F2
TRAM1
BMPER
EPB41L1
TMEM229B
EPB41
ST3GAL2
STK10
EFCAB9
WRNIP1
MYLK4
DCTN4
MACIR
SPATA9
RHOBTB3
WARS2
FCHSD2
ETAA1
LPCAT2
CPT2
H1-2
ZRSR2
H3C3
PITPNM2
PSMD2
DYRK2
DYRK4
ATP5IF1
ITPKC
COQ8B
TRIB1
TRA2B
H3C4
H4C5
H2BC7
H2AC7
NCAPH
SEC24B
WDR81
TLCD2
CBFB
COL7A1
BCAT1
SLC2A14
NFAT5
KDM6B
ART1
VWA5B2
SHC4
ZNF341
CLCN5
UHRF1
UBIAD1
AP1AR
UCKL1
PDGFB
SCAPER
PAX6
GPR1
CHST3
RNF212B
SELENOF
HS2ST1
RNFT1
ID2
MT2A
TUSC1
C1orf74
GTF2B
ST3GAL4
RPL3
USPL1
HMGB1
TMEM40
MEF2D
PEMT
ERCC1
ID1
ZNF575
ETHE1
MTF2
GOLGA5
LMO4
SLC25A25
SPRED2
HMGB2
NAIF1
SIAH1
ZNF235
USP35
TTC39B
RARA
P4HB
ARHGDIA
TBC1D16
DPYSL3
SMG9
ACOX2
SMNDC1
FAM110D
ARHGAP24
H2AZ1
DNAJB14
SERTAD4
XPO1
TYRP1
EPSTI1
PRSS53
GSDME
ZFR
CARD17
FN1
PTEN
KLLN
PDXK
DACH1
CALM2
SLC2A2
MADD
UBAC1
LDHA
FHL2
FBXO32
TFPI
ZNRF3
SERINC2
IL6
RHOG
PINK1
MTIF2
SLC39A13
ZSWIM5
ZNF354A
RRM1
NDEL1
PIGX
CEP19
TCTEX1D4
PLK3
BTBD19
NOTCH2
MAFK
GNAL
CHMP1B
TMX4
FDXACB1
C11orf1
ALG9
PLA2G10
ZNF296
GEMIN7
FBXL19
ZBED2
COMMD1
ZMYND11
GFOD1
SH3BP5
ZCCHC4
LIMK2
ZBED6
UTP18
MBTD1
LOXL2
TEAD4
SPATA5
NUDT6
NEURL4
CRHBP
ACAP1
PTGIS
TADA1
C1orf100
SP4
IGF2BP1
RABEP1
SYTL2
UBE2B
CDKL3
CABLES1
FZD6
SLC46A3
XAF1
SUCLG2
NPC1
SAMD14
PDPR
LOXL3
DOK1
STRA6
NFIC
IFI35
FEM1A
AURKAIP1
METTL11B
DCAF10
RAPGEF1
SMAD7
BRD7
CHIC2
AGBL2
PUS10
PEX13
TRIM2
ZNF142
RPL36
MICOS13
HSD11B1L
BCS1L
CENPE
FAM118A
FZD9
TMED8
SAMD15
USP30
CD53
MTRNR2L2
MSH3
DHFR
PITX2
MTRNR2L8
ASIC3
JUNB
ETS2
HOOK2
SPACA6
SLC7A5
PROC
PRR14
FBRS
HTRA1
KIF5C
NODAL
ZNF664-RFLNA
ZNF664
CCDC92
OLFM2
SMYD3
ID3
MRPL24
AFAP1
DNAJB2
NEURL1B
SMAD3
WBP1L
ROR2
LAMC3
CST6
TBC1D22A
DNAJB5
PPP1R13L
POLR1G
JMJD1C
CLDN14
SNX9
LEFTY2
GIP
STAM2
HDGF
LTBP2
TRIOBP
TMEM95
KCTD11
LOC389199
RNF213
ASB6
TMEM63A
LEFTY1
JUND
BMF
GID4
ATPAF2
GPR182
THAP9
SEC31A
KCTD21
PTPRN2
TSKU
SMARCD3
ALOX5AP
FOSL2
YTHDF1
TTI1
RPRD1B
EP400
ASS1
CGB5
ARAP1
PTPRB
TOMM20
UVSSA
BMPR2
DDAH1
CCN1
CCDC200
HPS4
ZBTB38
SSBP3
CAV1
PLAGL1
CYP2B6
CSRNP1
NPM3
FGF8
FPR3
BHLHE40
NOTCH2NLA
KPNA7
SREBF1
KANK1
PLCXD2
IVNS1ABP
B3GNT6
BAMBI
DENND2B
INPP4B
FGF17
DMTN
MTHFD1L
DGAT2
SNX18
MYL10
TMEM242
TGFBI
LAMC2
MS4A10
STOX2
KAT5
ITGAE
AGO1
ALDH18A1
GATA4
MUC3A
PLAU
MRPL2
KLC4
CUL7
CXCR5
ZMIZ1
UAP1
USP2
WNT7B
GATM
EAPP
OAZ1
ANGPTL4
EOMES
TNK2
OVCA2
ITGB6
VPS28
CGB2
CGB1
CEP55
CCDC88A
ZNF212
GLIPR1L1
CAPS2
ANKLE2
NPFFR2
HOPX
KLHL5
BMPR1B
ACLY
PSD3
LAMA5
DVL1
MYEOV
GADD45B
ZBTB4
SLC35G6
POLR2A
NSMCE1
ARID3B
CLIP3
MYBPH
GAL
CHI3L1
TMPRSS11D
BEST3
GLIS3
UPK3BL2
SPDYE2B
SPDYE2
SLC35A4
APBB3
NOTCH2NLB
PF4V1
CXCL1
FST
RAB11FIP3
FOXS1
CCDC24
ARHGEF18
LTBP1
SIRPA
CGB8
CGB7
ACOX3
PCNX2
PKP1
ALOX15B
CER1
LPCAT1
PLXND1
CLTB
DOCK2
CLCF1
ELAPOR2
SMARCA5
GNE
CDCA4
IGF1
MFNG
AGFG2
WT1
MYT1
H4C9
H2BC11
H2AC11
ILKAP
BACE1
PHC2
OSGIN2
S100A2
SLAIN1
NBL1
MDFI
MDN1
ISG15
LRRC37A3
MTNR1A
HAUS7
KLF10
IRF2BP1
CREB3L2
C11orf42
ITLN2
RFTN1
CALM1
MDC1
KANSL3
IFT140
H2BC21
H2AC21
H2AC20
CRAMP1
BEAN1
ACP6
SLC39A4
DRAP1
C11orf68
RHOF
PLEK2
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
MYOZ2
IFNA8
OCA2
SF3A3
TMPRSS9
NAV2
DDX47
APC
TAF12
STK33
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LEMD3
CEP57L1
AGPS
SDR9C7
RGS10
LOC100287896
LIPT2
GJB5
GJB4
GAS2L1
TTLL2
PDE4B
PDE6A
ARMC9
CHST11
TMEM87B
RHOD
ANXA8
NEDD4L
SLC6A15
F2RL1
ABR
KLF7
NTMT1
KLRD1
SFT2D3
PAGR1
MVP
LPCAT3
ZG16B
VDAC1
WDR54
UNC50
COA5
C2orf81
PEAK3
HNRNPM
BMP5
SPON2
HEXB
PNRC2
RUNX1
SOWAHC
SEPTIN10
GATAD1
TBXAS1
KAT6A
SRSF6
IDO2
PPP1R15B
MINDY3
UQCRHL
TEAD1
B4GALT6
RNF223
TUFT1
DSC3
ZNF792
C12orf42
PGK1
CDKN1A
PRKACB
POU5F1
GCH1
FMN2
SHISAL1
ASB2
ZNF655
SLAMF1
MARCHF5
FAM200A
CPEB3
AXL
ABTB2
VPS36
SLC39A7
RXRB
RING1
MAP3K2
HSD17B8
GSC
CKAP2
POU2F3
FOXP1
KCTD1
HK2
EXT1
TNPO1
EPG5
NOS1AP
HMGA1
KRT36
KRT13
CTPS1
NPAS4
ATP13A2
STK38L
OSM
MAP2K3
PRMT5
OBSCN
GTPBP6
MCM7
AP4M1
FHL3
NRCAM
NPR2
CELSR1
WDR74
STX5
IL17B
AKT2
ZSWIM4
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
GOLGA6A
ETS1
FXYD6-FXYD2
FXYD6
CHN2
CDH26
LOC100505841
AFAP1L1
SLC36A2
PIK3R6
ARMC7
IL17RD
GADD45G
FSCN1
RAB17
CCNI
ANK1
SLC18A3
PRDM14
CHAT
SERHL2
IGFBP7
FGF1
DUSP1
POLD4
NEDD9
KRT80
C5orf46
BORCS5
SMIM35
PPP6R1
AK3
SIK3
GPR183
CYP27C1
NEDD4
DNMT3B
COMMD7
PIK3CD
CRYAA2
CRYAA
BAIAP2
AMPD3
NUAK1
VWA3B
SRP14
FAM184A
ZNF189
PPP1CB
NOTCH3
MRPL50
BAAT
AKIRIN2
STX1A
KCNF1
GOLGA6D
TSEN34
MYOM3
NDST2
WWC2
VOPP1
CD8A
PDE2A
ACSS3
UBE2D3
L3HYPDH
JKAMP
LRP5
BLOC1S2
PCED1B
LRTM1
CREB5
ARL4A
AMIGO2
TSN
NIFK
NARF
CYBC1