ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064492 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◣ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PITX2
ROR2
GID4
ATPAF2
SMAD7
SLC7A5
MRPL24
HDGF
SSBP3
FGF17
DMTN
SMARCD3
ETS2
CEP55
TSKU
PMEPA1
SLC35A4
APBB3
CCDC24
BMPER
ELAPOR2
SMARCA5
AGFG2
RAB11FIP3
USP2
APC
TCTEX1D4
PLK3
BTBD19
DIAPH3
TMEM87B
HNRNPM
AFAP1
LOC389199
IDO2
PPP1R15B
MINDY3
ZMIZ1
ZNF792
GSC
EPG5
GATA4
AKT2
TMEM63A
LEFTY1
FXYD6-FXYD2
FXYD6
SLC36A2
PIK3R6
ARMC7
PRDM14
SERHL2
EPSTI1
GPR183
VWA3B
KCNF1
ACSS3
LRTM1
CNNM1
NKG7
ETFB
CLDND2
MYOM1
BCL11B
RFPL4B
BEX3
AXIN2
WT1
LEFTY2
CER1
SLC1A1
GREB1
DACT2
HS3ST1
NODAL
LAMC3
ACOX3
WDR54
C2orf81
UQCRHL
NCR1
GJB3
CFLAR
C2orf74
TOMM20
ID3
CLIP2
CSRNP1
SNRPF
H2BW2
ZNF664-RFLNA
ZNF664
CCDC92
FOXI1
ALOX5AP
DENND2B
SRL
IGF1R
TNFSF14
EFHD2
EOMES
ID1
APOLD1
UMODL1
LAPTM4B
NEURL1B
MTRNR2L8
OVCA2
HIC1
C13orf42
FAF2
AKAP13
RAB33A
AIFM1
ARHGEF4
SPOCK3
RAB17
SLC5A3
SAXO2
MRPS6
EFL1
ADGRG7
APOA4
MTRNR2L2
MSH3
DHFR
NPFFR2
TMEM272
LOC389831
TP53TG5
PIP4K2C
TTC39B
DGAT2
PTPRM
NTN1
ANGPT2
YARS1
S100PBP
ADGRF2
MYT1
ANKDD1A
ZNF558
SETBP1
MARS1
ARHGAP9
SPDYE14
SPDYE10P
SOX21
SACM1L
ZNF683
TTF1
CFAP77
WDR44
CDHR3
MTRNR2L1
OPN5
HOXD13
EVX2
ZAP70
ATP6V1B2
GAD2
CST6
EIF1AD
BANF1
SYNDIG1L
RAI1
TMEM185A
SEMA3E
ITLN2
GRSF1
TMEM86A
L3HYPDH
JKAMP
NEBL
AGPAT3
LBR
CAPN14
COPS8
BEAN1
RUNX1T1
DUX4
NDRG4
FOXN4
ZNF296
GEMIN7
NUAK1
TVP23C
CELA3B
GPR19
ARHGAP39
DECR1
MIXL1
PAX4
MYO7B
KIF5C
NBL1
OR6V1
SLC3A2
SLC6A1
PIP5K1B
TDGF1
LRRC2
PDE2A
SMAD3
RANGRF
PDZRN3
CELA3A
ALK
XPO6
OSCP1
MXD4
MRPS15
DUSP5
ID2
SNX9
ROR1
ZNF587B
EPHB2
ARF1
PLAGL1
PLPP4
TCEA2
SOX18
GNA13
SLC26A7
BMPR2
UBA1
RXRG
PRR5L
FOXA2
TLE2
FLVCR2
RP1
PTCHD1
HABP2
DUS2
DPEP2NB
DDX28
DNAJB2
NRCAM
SPINT2
TVP23B
CRYBA2
CASTOR2
SPATA19
MRPL22
GEMIN5
MDC1
RNF19A
CYTH1
CLIP4
CDK14
SMARCD1
ASIC1
CUEDC1
HSD17B14
ARID5B
MDN1
APOL3
IL17RA
AASDH
LPGAT1
SMAD2
PKHD1L1
IQCJ-SCHIP1
IQCJ
CST5
NDUFB4
SLC8A1
BRD7
CCDC192
TBC1D14
ALG14
ADAP2
PAQR9
EML1
ZNF169
CKM
ADPGK
ANK2
HOXA2
HOXA1
ACSM4
TRIOBP
CAV1
GCNT1
ZBTB18
RRBP1
MST1
FNBP4
SPACA3
SPTAN1
AKR1B15
CTXND1
IL6ST
VIPR2
WDR25
WARS1
SLC34A2
LGR5
FGF5
CFAP410
IL17RD
FGF1
RNASE9
ZBTB40
NOG
SLAMF1
FBXO34
CIZ1
CCRL2
IRF2BP1
CALN1
NQO2
IFIT3
CERS4
NDST2
SUOX
IKZF4
CPE
PRND
ZNF608
HNRNPD
TRMT112
PRDX5
NANP
IFNLR1
ARSG
SMYD3
CD8A
ADAMTS18
ST3GAL1
PAPOLB
DDR2
S100A10
TAGLN2
SAMD5
FGFR4
VANGL1
TMEM25
PPFIBP2
BDH1
MCAM
USP53
CSNK1A1L
ITGB5
POU2F3
ATXN7L3B
FILIP1L
SLC24A2
MTRNR2L6
CMSS1
DHRS3
SIRPA
TCP11L1
TBCA
RIPOR2
MECOM
PPRC1
GLT1D1
APOBEC3D
APOBEC3C
ITGB6
UBAP2
TLN2
SH3BGR
LCA5L
CDC42EP1
PBX2
KIT
GPSM3
AGER
ARHGAP28
MADD
TMEM225
TEN1
BLOC1S6
ACOX1
ABHD4
NOD1
MSMB
MN1
PHLDB2
AIRE
KRT36
KRT13
STING1
PIK3CG
MYCL
MVB12A
MCF2L2
CFC1
BST2
TRIP10
GPR108
APOBEC3F
FAM168A
RBP5
CLSTN3
JUND
NAIP
FAM71A
C12orf43
AFF3
ZNF540
SMAP1
PSKH2
HNF4A
JAG2
PCK2
NRL
GPT2
RPS3A
PCED1B
AMIGO2
CHL1
ADGB
MTHFD1L
ZNF831
TBX3
RABGEF1
OCLN
DCBLD2
PIPOX
ETS1
MTRNR2L9
SBF1
ZIC2
RPS6KA2
GPHB5
CCDC60
VIRMA
TP53INP1
PTAFR
FAM104B
DCSTAMP
ANKFN1
TMEM14B
NUMA1
NAA60
LRTOMT
GSTT2B
GSTT2
DDTL
DDT
UPB1
PPP1R21
APOBEC3G
ATL2
HRK
SNX18
UNC50
COA5
HEXB
SPRR1B
RPRM
STK40
SFXN1
SERINC3
PKIG
MAP9
KCNIP4
NPM3
FGF8
GTPBP6
UFSP1
SKAP1
ACHE
TNRC6B
GUCA2A
IGFBPL1
GPR37
FOXO3
DUSP29
ZNF592
MYC
ZNF732
PHACTR1
STK33
GJB5
GJB4
FMN2
CHD2
PARL
SORCS2
SALL4
RADIL
GREM2
ABCB11
TRAPPC4
SLC37A4
RPS25
PARD3
APLP2
OR51M1
NT5DC4
IL12B
BAG3
AFF4
ZSCAN22
STAG1
METTL24
EHHADH
ANKFY1
ELMO1
RAB40A
VDAC1
OTUB2
BOD1L2
AGPS
NTMT1
NUF2
SMIM8
GJB7
CCNG1
ERGIC1
CTF1
BCL7C
ABLIM1
KRAS
ZNF610
ZBTB8OS
TNC
SFRP1
RBBP4
PALB2
DCTN5
C8B
LIFR
FARP1
INPP4B
PHC2
ZBTB25
ZBTB1
TMCC3
CELF1
UACA
HROB
CES3
ACOXL
WIPI1
TALDO1
SOAT1
PTGR1
FLNB
DTNB
CASP7
SOWAHC
SEPTIN10
HACD2
GPM6B
COMMD2
CLDN24
CLDN22
CEBPB
TRIM2
FAM91A1
TOMM34
MRGPRX1
LOXL4
GNG10
GBP4
TSN
NIFK
TNRC6C
TIAM1
MAGI3
LRIG3
TSPAN13
GAS2L1
MAB21L4
CROCC2
NBPF15
ATF3
KCNJ1
CRYGB
IVNS1ABP
SYNPO2L
MYOZ1
ESR1
ADM
KCTD1
PLLP
ZNHIT3
ZSWIM3
FGFR2
ACOT8
DST
BCAR3
TMEM14A
MACC1
HYI
FDXACB1
C11orf1
ALG9
CCNI
NEDD9
SNTB1
PKP4
FZD8
DICER1
CCDC148
ZNF148
METTL11B
CYP19A1
SCOC
TPM1
RTRAF
PARP11
ENPEP
UROD
HECTD3
SELENOT
PAQR5
ODF4
RTL10
PRKX
PLCG2
GNB1L
PRR14
FBRS
C5orf63
MUC20
MYO16
LYPD6B
GPR161
CLTA
CCDC182
XPA
CFC1B
ADAMTS8
TFRC
SUCLG1
PELI1
CNDP2
BCL9L
RBM8A
EPHB3
ENTPD4
MCCC1
LOC107986453
GSTA1
FAM237B
PGPEP1
PRDM1
HNRNPA2B1
CBX3
ZNF396
NDUFB7
LPIN3
SPACA6
DAAM1
SEC22A
MSX2
PRAG1
NDST4
DDX58
ZBTB8A
RNF130
MATN3
JAM2
TMEM233
RRP15
COG1
FAM83F
CPT2
TMEM244
RDH13
EPS8L1
DDX47
RNF224
RNF208
CYSRT1
ZSWIM6
KLHL4
KALRN
TRIB1
NEDD4L
PDK1
LHX1
SPAAR
HRCT1
PKIB
CHIA
USB1
CDH8
ZNF76
TIPARP
ZNF438
EYA2
SGK3
CLDN18
MYBPH
CHI3L1
CUL4A
RAD54L2
SLITRK2
CYP2A6
ZNF740
PTCD1
PLAUR
CSAD
CPSF4
CRTAM
PTPRD
WDR6
DCLK3
SLC25A51
GRM3
BMP7
RASGRP3
BAMBI
RASSF10
CLVS2
FRG2C
SKIL
PRKAB2
CHD1L
SIRT1
TBC1D1
BIRC7
LOC102724770
DGCR6
FRG2
LURAP1L
SERPINE1
MAMDC2
MAN1A2
VKORC1
BCKDK
CRTC1
TGIF1
ASIC3
RBPJ
TUBG1
RETREG3
IL20
JUNB
KLHL31
MMP20
LIMS1
F2
H2BU1
H2AW
GP9
HOOK2
TEX45
PEX11G
ERCC1
AVEN
TNIP1
DLX3
NUP205
RNF103
PDLIM7
COL7A1
CD44
SULT1C4
KDM6B
SERPINE2
USP35
PROC
DIXDC1
LMNA
LOXL1
PATJ
VAC14
HTRA1
GRAMD2B
SYNPO
PLN
AGAP3
TMEM268
DMAC1
TMUB1
FASTK
OLFM2
GAD1
ALDH1B1
ZC3H3
GSDMD
DISP1
LRRC61
ACTR3C
DTNA
LAMB3
ASPN
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
GAB1
UBAP1
C11orf91
ANKRD34B
PDGFB
FSTL3
MYO6
GALNT11
SMG9
RPGR
ZNF703
CASZ1
MIS18BP1
NDE1
MARF1
RNF214
PCSK7
TNFRSF10A
HOXC9
HOXC10
OTUD7B
ARHGAP22
WBP1L
CMTM6
IKZF5
ACADSB
PRRG2
NOSIP
ME3
CDK5RAP2
ANXA8L1
PPP3R1
TBC1D22A
MTIF2
HCAR3
HCAR1
ARHGEF16
UBE2T
THEM4
PPP1R12B
DNAJB5
PPP1R13L
POLR1G
JMJD1C
PDXK
PEDS1-UBE2V1
PEDS1
STRA6
ECHDC3
CLDN14
PRR29
ICAM2
RAB12
GIP
C15orf39
BCL10
INSYN2A
FNIP2
YPEL5
EPB41L1
STAM2
TOGARAM1
KLHL28
LTBP2
TGM4
AADAT
TMEM95
KCTD11
LRRC31
ART1
METTL17
RICTOR
KTN1
REN
FOXN3
CCPG1
C15orf65
PRKCI
TMEM263
KDSR
TYRP1
RNF213
PAX6
GPR63
ASB6
C1QTNF7
FAM172A
NFKBIL1
DDX39B
ATP6V1G2
MYADM
BMF
LIMK1
GPR182
FMN1
DNAJB1
CHIC2
THAP9
SEC31A
KCTD21
SCAPER
PTPRN2
SNX25
CFAP97
RARA
PDLIM1
STMN3
RTEL1
TRA2B
FOSL2
YTHDF1
H3C4
ART4
TTI1
RPRD1B
DACH1
EP400
ASB5
BCAT1
NOTCH2
MCTP1
H4C5
H2BC7
H2AC7
TMEM229B
MMP10
CCDC33
PITPNM2
ASS1
CGB5
ARAP1
PTPRB
PSMD2
CENPA
CTCF
FRMD5
FHL2
DSP
PLCXD3
PIWIL4
UVSSA
GNB2
SLC25A25
RBM27
SCD
PELO
ITGA1
DDAH1
CCN1
CCDC200
AMPD1
HPS4
ZBTB38
EPB41
ZNF341
EPS15
GPR1
CYP2B6
FPR3
CALM2
ACOX2
CORO2A
BHLHE40
NOTCH2NLA
KPNA7
AMOTL2
SREBF1
KANK1
CHRNA9
TM4SF1
SCX
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
TMTC4
XRN2
B3GNT6
E2F3
BIN2
SPRED2
FLRT2
LRRC71
MYL10
ENTPD6
TMEM242
TGFBI
ZNF571
COA7
SERPINB2
LAMC2
MS4A10
SCARF1
RILP
LIMK2
STOX2
KAT5
DYRK4
DERL3
ITGAE
ST3GAL4
LNX1
AGO1
FBXO32
RIC1
ALDH18A1
PLA2G10