ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXC9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◣ HOXC9: Average

◢ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
NRL
DCAF11
TNFAIP2
FOXJ2
SLC6A2
GPR84
GALNT16
ZNF48
TBC1D10B
MYLPF
MAP3K7CL
CCT8
HOXC6
HOXC5
TCIRG1
NDUFS8
SCML4
DUX4
TRAF3IP2
DNAL4
ING3
GLDN
PPP5C
DPP6
UBXN10
PLA2G2C
NRSN1
RPL24
KIAA0319
FGF8
DRGX
FBXW2
RPS5
HOXC4
SEMA5B
ACTR3C
IGLON5
GPR68
ZSCAN31
NR3C1
SF3B6
FAM228B
TOMM40L
APOA2
PIH1D1
ALDH16A1
TIAM2
KATNB1
OLFML2B
LPIN1
PRR13
STRN3
AP4S1
WIZ
CXCL12
TGFBI
GFRA3
SLC17A8
DIABLO
KCNAB2
TLE5
SLC17A3
FKBP1A
GNL2
C6
RNF183
RIMBP2
CCN5
MTRNR2L2
MSH3
DHFR
ITGB5
C10orf105
SMYD3
DDX43
SYBU
TMEM183B
RMDN3
PFN2
GCHFR
C9orf92
ABCA12
CMTM4
ZNF654
CGGBP1
LRRTM4
SLC25A25
CBX5
CNTNAP4
FAM163B
USH2A
TLE3
ZBTB18
CCDC73
TBX15
RAPGEF2
BFSP2
C1orf185
C1orf100
P2RX1
CPO
KIF26B
SAMD11
NCK1
LIMS1
ENPP7
MFSD6
TPM1
IGFBP5
CHD1
LENG9
CDC42EP5
GRWD1
SCOC
ZNF761
FAN1
SLITRK5
HES6
C9orf62
SLC31A1
FKBP15
CITED2
RPS7
VAV3
KCNK16
GDF11
SIPA1L2
GABRA1
C14orf180
ATG9B
ABCB8
RDX
ETV1
TCF4
KBTBD11
GSX2
HOXC8
LRRC15
SLC12A3
PNMA1
ZBTB45
SLC27A5
SULT1C4
MAP1LC3C
CHCHD3
CENPF
CYTH3
EVI5L
AQP6
PHF14
ANGPTL7
TSHZ2
TAS2R20
SLC25A26
KL
SMC2
PHLDB1
TBX3
SLC7A14
PLEKHS1
UBE2D1
OPRM1
IFT57
MACROD2
ELAVL4
ASCC2
PARVA
CHGA
MECOM
TIGD4
ARFIP1
SLC2A8
NPR1
ILF2
CDH10
ZBTB39
GGT1
NPTXR
MTRNR2L8
ADGRD1
RXFP4
KHDC4
PRKD3
PIAS4
IL19
ADCYAP1R1
HAPLN1
MICAL3
TUBB1
CRYBG1
ATP5F1E
PRSS56
FOXN4
ZNF488
HERC3
CCDC33
ZZZ3
USP7
UGT1A6
ROBO4
STON2
RSAD2
FRG2C
SNX4
GPR1
COMTD1
COX16
TNFRSF19
EXOSC2
KDM4B
AMY2A
NRP2
GPR83
CHI3L1
RGS5
ATF3
PRKAG2
DNAJB8
NTNG1
STAT1
PWWP2A
ITPK1
SKP2
OXCT1
LMBRD2
IQSEC1
RCAN1
MAD2L2
DRAXIN
KIF3C
TFPT
PRPF31
MRPS14
NFASC
EEF1AKNMT
VSTM2A
C3orf52
PRKAR2B
GJA5
TEDC2
TBC1D24
NTN3
OLFM3
FAM161A
FAIM
SIRT1
PHOX2B
EPRS1
TRIL
FBXO30
PPP3CA
CNTN1
MAD1L1
RBKS
GNAQ
BABAM2
KMT2A
ELMOD2
MTRNR2L1
SOX4
PDZRN3
H3C15
H3C14
H2AC19
H2AC18
AGR2
PLA2R1
CYRIB
ABAT
CD200R1L
LOXL1
LRRTM3
LIMA1
PDCL
DERL1
CDH18
MFSD12
GYS2
CATSPER3
PLEKHA5
NRG1
CDON
TIMM44
DISP1
CHRM3
PPM1A
TRMT5
SLC38A6
TBX2
SIX1
DAOA
SNX7
SGIP1
GJD2
CHD9
KCNH6
CHST6
NTN4
DCLK3
ZNF552
QSER1
BEAN1
DRD2
SEMA4B
TMEM60
PHTF2
SPINK5
SH3GLB2
TMOD1
PLD1
CYB561
BARD1
SIRT4
SMAD9
HTR4
ZNF555
TUB
SUGP2
ARMC6
NSD2
DYNLL1
ZNF510
CCNG1
PRKG1
RARB
MRPL28
VPS52
RPS18
IGDCC3
B3GALT4
VSTM5
TBCC
MAP1LC3B
FBXO31
BICRAL
PSMC1
SRP14
COX7A2L
USP40
B3GLCT
ANKH
RAB39A
ISL1
DGKB
TAOK3
MTUS1
NEPRO
PHKB
PACS2
ITFG1
BRF1
NEMP1
NAB2
DIPK1A
MAPK13
RNF4
RHBDD1
PLXNA1
SYNE3
SLC31A2
PKLR
PKDCC
FDPS
CEP152
ARL14EPL
MTA1
GGCT
DIXDC1
MGAT4C
KCNH2
GOLGB1
MN1
RTN4IP1
DLX6
PAFAH1B2
MPHOSPH8
RAB11B
KIF26A
ZFPM2
LYN
BMERB1
ZBTB7C
SMARCAD1
INTS4
PIK3C2G
RIC8B
RET
POMC
PCOLCE2
AMPD2
RPH3A
ITSN1
CRYZL1
TULP3
RHNO1
FOXM1
FAM219A
DNAI1
STK32B
AFF3
TOM1
SLC17A2
RAB28
HOXA7
HOXA6
HOXA5
HOXA3
BAZ1A
PBX3
GPR85
GGT2
CPA1
SLAMF8
SLC48A1
RARRES1
OAZ2
ID4
ZFAND6
SLC8A1
PLAC1
ASNSD1
ASDURF
STARD13
PMVK
ASB8
ZNF775
KRT80
ICA1
CTBP2
RHO
UTS2R
TEX19
RAPGEF3
MPP4
ASF1B
KCNK15
IGF2BP3
AOPEP
ACVR1
SCHIP1
PRR25
GNG13
CFAP126
ANKHD1-EIF4EBP3
ANKHD1
WNK1
RGS4
MAP3K13
ITM2C
KNL1
ACTN1
KHSRP
EFCAB6
CP
SWSAP1
SLC18A1
HEBP2
RTP5
RNF24
PDCD1
HAND1
ATP2B4
EFCAB2
ZNF667
BAMBI
CARS1
MTIF3
PTAR1
AGFG1
RP1L1
CTRL
PSMB2
TMEM126B
FBXW7
DLG2
APMAP
ZFHX2
TBC1D4
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
ZNF350
MEX3B
RUFY3
HOXD4
CALM2
SUCNR1
HEXIM2
CFAP20
LOC102724770
GPR137B
DGCR6
DCP1B
BEND4
SPATA24
SH2D3C
BCL9L
TUBG1
RETREG3
CCDC196
ARID5A
TM2D1
PATJ
H3-3B
GALK1
RBM25
PIK3R4
NCS1
TCERG1
RMDN2
NOMO3
NOMO1
MIR1-1HG
FAM222A
BAHCC1
SLC11A1
DHRS2
CDK17
RASD2
RARA
KIF2A
CACNA2D4
YWHAB
ARPC1B
ZNF106
SNAP23
PWWP3A
UPP1
SORL1
C8orf48
CDIPT
LINGO1
HOXD8
AMMECR1L
ADAMTS17
MTHFSD
EAPP
CGAS
ADGRE5
TPGS1
TMEM236
SFPQ
RNF145
PPP2R5E
FRMD3
SELENBP1
UHMK1
C3orf38
ADAMTS19
RABGAP1L
PRRC2B
PODN
MDM4
DPH2
CYP8B1
B4GALT2
ATP6V0B
PTGES2
NGDN
ZNF132
TOX
TIGD6
HMGXB3
ZNF608
VPS26B
NCAPD3
FAM107B
RAB14
GSN
GPR107
DBH
RACGAP1
ASXL2
ACTR3
CABCOCO1
FOCAD
TTC12
STK40
PRPF4
CDC26
TMEM79
SMG5
SLC35B4
ALG10B
YWHAZ
MFSD8
MAP2
LRRC18
GCSAM
ABHD18
TRPM3
PIGM
GRIK2
ESRRB
SUPT7L
SLC4A1AP
NUF2
USP25
TAPT1
RBM15
RBM12
CPNE1
SCIN
IGFBP3
CLASP2
CUBN
VEPH1
TIAM1
NFYC
COL21A1
RAB31
GPR155
AP3S1
ABT1
KIAA1549
GBA
FREM1
FAM160A1
CTDSP1
HGF
FGF1
MAMDC2
LSMEM1
FAM214A
SARS1
MOV10L1
MLC1
CLMN
UBL4B
GP5
SCARB2
PSENEN
PROSER3
LIN37
KCNJ3
HSPB6
FAM47E
ULBP3
KIF18B
TMEM141
ZSWIM4
ZC3H3
PSMD6
APH1B
MARCKS
CAMK4
FUT6
SORT1
SLC39A13
MBOAT4
FAR2
DCTN6
CIB4
TECTA
SYNPO
RPP25
KRT19
FCF1
CREBL2
CAND1
AREL1
AHCYL1
PC
OSBPL1A
NT5C2
FLYWCH2
ERCC6L2
DPP9
CYP51A1
BMPR1B
MTA3
KCNG3
GSKIP
FOXP1
FOXJ3
CPA3
FRG2
FILIP1
FGGY
TMEM262
PTPDC1
NUMB
KRBA1
XAB2
STXBP2
SHC1
PCP2
FLAD1
CKS1B
NME7
ISLR2
BLZF1
ANO6
TBC1D31
RASGRP1
KREMEN1
COG3
CALCOCO1
ZNHIT3
THRAP3
RNF34
NEK2
IMPDH1
TDRD9
RASSF8
MC4R
EIF3D
BAX
ATP5MPL
PRKAB2
MTMR10
GRAP2
CHD1L
ARL17B
ARL17A
ANTXR2
AGTR1
ZFR
SRPK2
MRPL27
MFAP3L
EME1
TUBB2B
TNS1
POGZ
EMP3
CREB5
LMO7
CASQ1
KLHDC8A
ZBTB40
EHD4
BCAR3
PRUNE2
KAT6B
HPS3
FAM98A
KCNAB1
AKAP11
PGP
E4F1
ARID5B
SLX4IP
PABPN1
MKKS
WASHC1
RXFP2
RERE
CCDC89
WASHC3
TJP2
STK39
PXYLP1
PDE4D
PDE3A
NECAP1
FKBP9
CEP85L
TRAF3IP3
MIA3
HECW2
FABP12
ASB6
TPCN1
TNS3
SFR1
NUP93
NEDD4L
BLOC1S5
WDR74
STX5
NOM1
CERKL
WNT5A
WAC
STYX
MTNR1B
IGFBP7
HES1
CRYGB
CLDN4
ARL15
AMOT
ZMYND8
TRIM56
TMCO5A
TLX3
SMIM3
SKA2
PRR11
CNOT3
NDUFB5
MRPL47
FAM240C
DPP8
DACH1
ZBTB20
SLC36A4
NRXN2
SLC26A7
NOMO2
ABCC6
PDLIM4
B3GNT3
RSPRY1
PSME3IP1
FGF14
CFAP69
ARHGEF3
ICE1
FAM102B
NUDT17
METTL7A
LRCH1
GLIS3
C12orf43
ZNF566
TFAP2A
SLIRP
PRRT4
PCSK6
PCARE
CHST12
CELF1
ALKBH1
SLC41A2
EEF2K
DYNLT1
CDH15
BIVM-ERCC5
PPFIBP1
MYT1
MCCC1
IRF2BPL
INPP4B
USF1
TSTD1
RPL27
LSM5
IFI35
CYTH1
AVL9
AGL
SSRP1
P2RX3
FUT8
ZNF444
INAFM2
GABRR1
CCDC59
BZW2
PTBP2
NR0B2
GPATCH3
WDR89
RHOBTB1
PGM2
SVBP
PLCXD3
KIAA0232
ERMAP
SURF4
RIMS2
LCN9
HSPB1
HEY1
HAND2
ZFYVE26
UBA5
TOM1L1
TMEM178A
TFB2M
TAS2R1
RAD51B
GPR19
GNA12
CYP19A1
CNST
ACAD11
TRUB2
TMEM245
PTPRK
MAP3K3
CUX2
COQ4
CEP41
UBE2V1
TUBA1C
TRIOBP
TMEM100
SH3BGRL2
MTMR2
H3Y2
TOMM40
SNX6
RPS6KA2
PAQR5
BCAS2
STUM
PRLHR
PCDH15
MYL10
HERPUD1
MLLT3
GNG12
COPS7A
PPP1R3C
EML4
DAB2IP
B3GNT4
B3GALT2
WBP11
TMBIM6
SMCO3
SLC44A3
RPS26
C12orf60
VLDLR
STRA6
LARP1
SESN1
PTPRE
MUSK
MARVELD2
GXYLT2
CEP57L1
TENT2
RFT1
BAZ2A
ATP5F1B
ZNF749
MTX2
HAGH
FAHD1
CPN2
ABTB2
PPP1R11
POLR1H
COL5A2
C16orf46
LOC283710
FOXN3
THEMIS
APOLD1
PAXBP1
OSBP2
MRTFA
DACT2
COX7C
ZFPM1
CSDE1
BICD1
ST6GAL1
SRRD
OXER1
HPS4
SULF2
RPRD2
PTBP1
PRSS41
PKD1L1
GGT7
ACSS2
MAP2K4
MAFA
INTS5
GANAB
WFIKKN1
SPTAN1
SERP1
PLEKHM3
EIF2A
DYRK1B
ZNF417
SMAD1
HS3ST5
H2BU1
H2AW
VIPAS39
GRAMD1B
CCDC9B
AHSA1
SEL1L
PDIA6
OR2C1
MTRNR2L4
EYS
BLOC1S6
ALG10
ZNF317
WWOX
TUFM
SH2B1
RFTN1
RBFOX2
MMS22L
SEPTIN11