ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957410 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◣ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PROC
CRTC1
VKORC1
BCKDK
BIRC7
TBC1D1
SKIL
DUX4
DIXDC1
DMAC1
HTRA1
F2
COL7A1
PDLIM7
SMAD7
FSTL3
COPS8
ASIC3
PLCXD2
H2BC21
H2AC21
H2AC20
SERPINE1
FRG2C
AVEN
CLDN14
SMYD3
DNAJB2
MAN1A2
SULT1C4
SPACA6
KAT5
TLR1
PRKAB2
CHD1L
JUNB
HOOK2
YTHDF1
LAPTM4B
HAUS7
ANXA8L1
THAP9
SEC31A
TNIP1
TMEM95
KCTD11
OLFM2
ERCC1
IL20
MMP20
SYNPO
ASS1
IGFBP7
GAD1
GP9
KLHL31
KDM6B
ARAP1
PPP1R13L
POLR1G
YPEL5
DOCK2
LPCAT2
TMCC2
MTRNR2L1
NOTCH2NLA
SMG9
PLXND1
ANKLE2
PMEPA1
WBP1L
CD44
TRIOBP
ZNF341
GADD45B
GPR63
NOTCH2
MS4A10
RNF103
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
FPR3
LIMS1
KRT80
OTUD7B
FOSL2
SYTL2
SDHAF1
MARCHF2
ITGB5
UBAP1
ANGPTL4
DNAJB5
PDXK
STAM2
MTHFD1L
TAGLN2
CDCA4
ARHGAP22
ZNF460
IGFBP3
MRPL2
KLC4
CUL7
ID2
ALDH1B1
SERPINE2
NOTCH2NLB
C11orf42
CYP27C1
HSPB1
USP30
CSRNP1
AFAP1L1
EPB42
MTIF2
CHN2
GCNT1
ZNF148
ANKRD34B
RBPJ
CGB5
CGB2
CGB1
SIRT1
LAMC2
MED13L
AXL
USP22
SLC35E1
SRARP
HSPB7
CLCNKA
EP400
CARD16
SLC44A1
FRG2
UAP1
TMPRSS9
LIMK2
NUP214
TINAGL1
ITGB6
TEX45
PEX11G
CCDC88A
FOXS1
H3C13
H2BC18
ITGAE
WWC2
BMF
SLC39A13
DCAF10
VAC14
ZSWIM4
PURA
LTBP2
GBA
FNIP2
SETD5
MTNR1A
BMP5
HK2
RBM15B
MANF
WDTC1
TGIF1
SRSF10
ZNF592
ABLIM1
VDAC1
INPP5A
PFKP
SLC46A3
LIF
HPS4
COL16A1
PDPK1
CEMP1
CA3
KANK4
PAFAH1B1
COL1A1
PTHLH
SH3PXD2A
GNB2
KMT2E
DMTF1
ID3
ZNF703
HOXC9
HOXC10
TGM4
MAFK
VDAC2
ADAMTS6
BMPR2
HOPX
DDX47
NOCT
MYRF
ITCH
TRIM2
UBE2B
CDKL3
SUSD5
HHIPL1
GNA12
MXRA5
MFSD1
STRA6
SH2D7
UBAC1
BCL3
B2M
BHLHE40
ACOX3
DLG1
HSDL1
DNAAF1
ZNF34
RPL8
KMT2A
ATP13A2
BCAT1
TGFBI
SF3A3
FHL3
PHLDB2
MAP2K3
PEX3
GALNT2
DYSF
ADAT2
RARA
IGF1
BRWD1
MTRNR2L2
MSH3
DHFR
MARCHF10
ZNF713
MAMDC2
FZD9
PRR14
FBRS
ABLIM3
GZF1
PTPRB
RFX2
ARMS2
WNT7B
SCAF11
ERG
TMEM229B
NUAK1
GAPDH
ASB6
ANXA8
MRTFA
CBX5
NSMCE1
NDUFS7
FBXL7
PRKCZ
WIZ
MAP3K2
THAP11
NUTF2
CENPT
PKP1
KLF10
SVOPL
TTYH3
GIP
BCL10
RCOR3
TMEM222
KAT6A
PHF13
RAMP1
IPPK
FHL2
UBE2D2
GATAD2B
BACH1
MED15
CTNNA1
POLD4
MYEOV
ASCC2
PITX2
LOC102724770
DGCR6
DHRS3
LURAP1L
MTRNR2L8
TUBG1
RETREG3
H2BU1
H2AW
ETS2
ID1
DLX3
NUP205
BMPER
DIAPH3
SLC7A5
USP35
LMNA
LOXL1
PATJ
GRAMD2B
KIF5C
PLN
NODAL
AGAP3
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
TMUB1
FASTK
ZC3H3
GSDMD
DISP1
LRRC61
ACTR3C
DTNA
LAMB3
MRPL24
ASPN
SLC8A1
GAB1
TRIB1
C11orf91
PDGFB
TTC39B
MYO6
RASGRP3
GALNT11
AFAP1
RPGR
CASZ1
MIS18BP1
NDE1
MARF1
RNF214
PCSK7
TNFRSF10A
NEURL1B
ZNF76
SMAD3
FDXACB1
CMTM6
C11orf1
ALG9
IKZF5
ACADSB
PRRG2
NOSIP
ROR2
ME3
LAMC3
CST6
CDK5RAP2
PPP3R1
TBC1D22A
HCAR3
HCAR1
ARHGEF16
UBE2T
THEM4
PPP1R12B
RFPL4B
JMJD1C
TLE2
PEDS1-UBE2V1
PEDS1
ECHDC3
SNX9
LEFTY2
PRR29
ICAM2
UMODL1
RAB12
C15orf39
INSYN2A
ANK2
BRD7
EPB41L1
TOGARAM1
KLHL28
HDGF
AADAT
LRRC31
ART1
METTL17
RICTOR
LOC389199
KTN1
REN
FOXN3
CCPG1
C15orf65
TCTEX1D4
PRKCI
PLK3
BTBD19
TMEM263
KDSR
TYRP1
RNF213
PAX6
TNRC6B
C1QTNF7
TMEM63A
LEFTY1
FAM172A
NFKBIL1
DDX39B
ATP6V1G2
MYADM
JUND
GID4
ATPAF2
LIMK1
GPR182
FMN1
DNAJB1
CHIC2
KCTD21
SCAPER
PTPRN2
SNX25
CFAP97
TDGF1
LRRC2
PDLIM1
TSKU
STMN3
RTEL1
TRA2B
SMARCD3
ALOX5AP
H3C4
ART4
ZNF540
TTI1
RPRD1B
DACH1
ASB5
MCTP1
H4C5
H2BC7
H2AC7
MMP10
CCDC33
PITPNM2
PSMD2
CENPA
CTCF
TOMM20
FRMD5
DSP
PLCXD3
PIWIL4
UVSSA
SLC25A25
RBM27
SCD
PELO
ITGA1
DDAH1
CCN1
CCDC200
AMPD1
ZBTB38
EPB41
SSBP3
CAV1
PLAGL1
EPS15
GPR1
CYP2B6
NPM3
FGF8
CALM2
ACOX2
CORO2A
KPNA7
SMARCD1
ASIC1
AMOTL2
SREBF1
KANK1
CHRNA9
TM4SF1
SCX
NUDT4B
KCNN3
SPATS2L
IVNS1ABP
TMTC4
XRN2
B3GNT6
BAMBI
E2F3
BIN2
DENND2B
INPP4B
FGF17
DMTN
SPRED2
FLRT2
DGAT2
LRRC71
SNX18
MYL10
ENTPD6
DAAM1
TMEM242
ZNF571
COA7
SERPINB2
SCARF1
RILP
STOX2
DYRK4
DERL3
ST3GAL4
LNX1
AGO1
FBXO32
RIC1
ALDH18A1
GATA4
PLA2G10
ITPKC
COQ8B
MUC3A
PLS1
TECR
PLAU
MOXD1
CXCR5
ABCC3
ZMIZ1
USP2
KCTD7
GATM
EAPP
GAB2
OAZ1
MACO1
HOATZ
BTG4
EOMES
TNK2
RRM1
OVCA2
VPS28
CEP55
ZNF212
GLIPR1L1
CAPS2
TFPI
NPFFR2
KLHL5
BMPR1B
EPSTI1
FDFT1
ACLY
HMGB2
PSD3
NUP153
LAMA5
DVL1
ZMPSTE24
TMCO2
ZBTB4
SLC35G6
POLR2A
ARID3B
CLIP3
C1orf100
MYBPH
GAL
CHI3L1
TMPRSS11D
SLC2A2
DCTN4
BRAP
ACAD10
BEST3
NAIF1
GLIS3
CAMK2A
ARSI
UPK3BL2
SPDYE2B
SPDYE2
SLC35A4
APBB3
PF4V1
CXCL1
FST
RAB11FIP3
CABP7
TVP23B
UBR5
CCDC24
ARHGEF18
LTBP1
SPDYE1
SIRPA
CGB8
CGB7
PCNX2
MRPS16
ALOX15B
SERTAD4
SARAF
CER1
WDR36
LPCAT1
CLTB
BET1
SIAH1
NFIC
CLCF1
WARS2
CLCN5
CHST3
ELAPOR2
SMARCA5
GNE
ZBED6
WSB1
MFNG
AGFG2
WT1
TPRN
SSNA1
ANAPC2
MYT1
H4C9
H2BC11
H2AC11
SLC35F2
ILKAP
BACE1
ZSWIM5
UTP18
MBTD1
ZFR
PRSS53
PHC2
USPL1
HMGB1
CPT2
OSGIN2
S100A2
AHCYL1
SLAIN1
NBL1
MDFI
RAB28
MDN1
ISG15
LRRC37A3
IRF2BP1
CTNNB1
CREB3L2
CPNE2
ITLN2
RFTN1
CALM1
PSKH1
NRN1L
MBD1
MDC1
KANSL3
FAM118A
IFT140
CRAMP1
BEAN1
ACP6
SLC39A4
VWA5B2
ZNRF3
FBXO3
DRAP1
C11orf68
RHOF
PLEK2
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
ANK3
MYOZ2
ZNF609
IFNA8
NUMB
DECR1
OCA2
SERPINB8
NAV2
ITPRIP
FAT4
APC
TAF12
STK33
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LOXL2
LEMD3
CEP57L1
AGPS
SDR9C7
NOL4L
RGS10
LOC100287896
LIPT2
GJB5
GJB4
GAS2L1
BPGM
TTLL2
PDE4B
PDE6A
DNAJB4
ARMC9
CHST11
TMEM87B
RHOD
CSF2RB
STEAP2
NEDD4L
SLC6A15
PANK2
F2RL1
ABR
KLF7
NTMT1
KLRD1
SFT2D3
SERINC2
PAGR1
MVP
LPCAT3
BRIX1
ZG16B
WDR54
UNC50
COA5
C2orf81
PEAK3
HNRNPM
CNOT1
SPON2
HEXB
PNRC2
MACIR
RUNX1
SOWAHC
SEPTIN10
GATAD1
TBXAS1
SRSF6
IDO2
PPP1R15B
METTL11B
MINDY3
UQCRHL
TEAD1
B4GALT6
RNF223
CDKN2AIP
TUFT1
GNAL
DSC3
ZNF792
SP4
C12orf42
PGK1
CDKN1A
PRKACB
POU5F1
NDEL1
GCH1
FMN2
SHISAL1
ASB2
ZNF655
SLAMF1
MARCHF5
FAM200A
CPEB3
ABTB2
VPS36
SLC39A7
RXRB
RING1
HSD17B8
GSC
CKAP2
POU2F3
FOXP1
MYL6B
KCTD1
EXT1
TNPO1
EPG5
NOS1AP
HMGA1
KRT36
KRT13
P4HB
CTPS1
ARHGDIA
NPAS4
CARD17
STK38L
OSM
PRMT5
ST3GAL2
OBSCN
GTPBP6
MCM7
AP4M1
PHF19
NRCAM
NPR2
FSD1L
H2AZ1
DNAJB14
CELSR1
WDR74
STX5
IL17B
AKT2
PTGIS
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
GOLGA6A
ETS1
LENG8
FXYD6-FXYD2
FXYD6
CDH26
TMED8
SAMD15
LOC100505841
ZZZ3
SLC36A2
PIK3R6
ARMC7
SPTBN1
IL17RD
GADD45G
FSCN1
TUSC1
RAB17
CCNI
ANK1
SLC18A3
PRDM14
CSF3R
CHAT
TRAPPC3L
TBC1D7-LOC100130357
TBC1D7
SPATA9
SERHL2
RHOBTB3
IFI35
FGF1
CALHM4
DUSP1
ASB8
NEDD9
LOX
C5orf46
BORCS5
SMIM35
PPP6R1
AK3
SIK3
ATP5IF1
ZNF575
GPR183
ETHE1
NEDD4
C1orf74
DNMT3B
COMMD7
UHRF1
SHC4
PIK3CD
CRYAA2
CRYAA
BAIAP2
AMPD3
ZBED2
VWA3B
SRP14
FAM184A
ZNF189
PPP1CB
NOTCH3
MRPL50
BAAT
AKIRIN2
STX1A
KCNF1
GOLGA6D
FCHSD2
TSEN34
MYOM3
NDST2
ARHGAP24
VOPP1
TADA1
CD8A
PDE2A
CABLES1
ACSS3
UBE2D3
FOXJ3
L3HYPDH
JKAMP
CXADR
LRP5
BLOC1S2
PCED1B
LRTM1
CREB5
ARL4A
AMIGO2
C2orf16
TSN
NIFK
NARF
CYBC1
CNNM1
JCAD
NKG7
ETFB
CLDND2
LBH
PLLP
EIF1AD
BANF1
IER3
FLOT1
CCN2
AMHR2
DYRK2
MYOM1
ITGB1
ZFP36L2
FAT1
TACC2
NSMCE4A
KRTAP21-3
RASL10A
BCL11B
RAD23A
CLTC
CALR
SUCLG2
LRP12
FAM170B
SLC2A14
PRRT2
PAQR9
OSBPL9
MAZ
MATN2
KCNK9
FZD6
COMMD1
ARHGAP39
HS3ST2
HNRNPA2B1
CBX3