ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PITX2
PMEPA1
NODAL
ZNF664-RFLNA
ZNF664
CCDC92
ETS2
SLC7A5
BMPER
CYP2B6
LAMC3
ID2
SMAD7
LEFTY2
NPM3
FGF8
SNX9
PRKAB2
CHD1L
CAV1
PCNX2
SNX18
STOX2
COPS8
PLAGL1
SKIL
ZNF148
ID1
ARMC9
TMEM63A
LEFTY1
SLC6A15
AGO1
POU5F1
DUX4
PRR14
FBRS
MTRNR2L2
MSH3
DHFR
CNOT3
NEURL1B
JUND
BMPR2
SPACA6
TEAD1
ZFP36L2
GAS2L1
RASL10A
TSPAN9
STAM2
BCL11A
NPFFR2
RFPL4B
ATG9B
MDN1
CEMIP
EOMES
WNT3
ALDH7A1
SIRPA
MRI1
MTRNR2L8
SUPT6H
SDF2
FAM20C
SMARCD1
ASIC1
OLFM2
KLF10
SMAD3
MUC3A
NBL1
CHST11
ZSWIM4
DAB2IP
RNF213
PPP2R2A
FAM178B
TBC1D2
KRT36
KRT13
POU2F3
FOXB1
JUNB
HOOK2
ETS1
LARS2
RHOF
SETD1B
BUD13
SH3GL1
CHAF1A
AHCYL2
NPAS4
ZNF853
DNAJB8
ZSWIM7
TTC19
DPPA4
NOCT
SREBF1
RNF32
LRRC37A3
NEDD4L
KAT6A
IL17RD
FOXJ3
PCED1B
AMIGO2
GALNT9
NOTCH3
MAP7
LDLRAD4
DRAP1
C11orf68
LRP6
EFNB2
GAD1
MTIF2
CALD1
MLLT11
CDC42SE1
WNT8A
FAM184A
GATA4
MTRNR2L1
MARCHF3
ADAMTS5
OCA2
CD8A
NUF2
GRIK2
MMP9
ATP9B
MARCHF5
CPEB3
PRAC2
HOXB13
CER1
TRIM56
RCBTB2
TAF13
CHD2
GTPBP6
JMJD1C
GAB1
RNF212B
DST
CYB561
DCAF10
EP400
USPL1
HMGB1
MTHFD1L
ESRP1
GNL2
MCHR1
RPRM
CCDC88A
NOTCH2NLC
GNB2
MRPS36
LMLN2
ABLIM1
UTS2B
CCDC50
BAMBI
PTGS2
CD101
ASNSD1
ASDURF
PCK2
NRL
TBC1D5
UAP1
RET
WT1
ANKRD46
FRG2
MRPL24
HDGF
SMAP1
HS3ST3B1
NSUN6
ARL5B
UBN2
MIPOL1
E2F3
SNX14
PMAIP1
EML1
NTM
ADAMTS1
RAPH1
PCCA
AFF1
TFAP2A
TBX22
PLPPR3
CASP3
AZU1
RGPD8
RGPD5
RGPD6
BOD1L1
PNMA1
LHB
CGB3
LRRC59
AFAP1
WWC2
PLAAT4
MAML3
ID3
OAZ1
PEAK3
PTPN18
TEAD4
NARF
CYBC1
WDFY1
PCDHAC1
GRM1
GIT1
ANKRD13B
ZNF609
ARL4A
DNAJC6
C3orf52
PTPRN2
SLC20A1
SMIM8
GJB7
ZFYVE16
KANSL1L
VANGL2
PDE6D
COPS7B
CDKN2C
ERCC1
DGAT2
RAB23
BAZ2A
CYB561D1
ATXN7L2
ZNF521
TGDS
GPR180
P2RY2
TNFRSF13C
SHISA8
CALN1
CBFA2T2
FAM168A
RAB35
NCOA3
IKZF5
ACADSB
HTR5A
HINT3
FEM1C
USP47
LHX5
KIF2C
RCAN3
TRDMT1
UBL5
NFIA
FBXL12
ASCC3
ZNF511
ZC3H7B
TUBGCP2
RANGAP1
MICALL1
LEMD3
LOC100287896
LIPT2
MARCHF4
JDP2
LSM14A
SRF
FAM162A
CCDC58
C4orf36
SMYD3
OR1E3
GBX2
LMNA
ROR2
XKR7
PCYOX1
MEX3A
SOWAHC
SEPTIN10
SLCO5A1
SEC22A
USP15
POLE3
KHK
EMILIN1
C9orf43
AMOTL1
ALAD
MTRNR2L9
PARL
OCIAD2
XPO5
TSPAN12
POLH
EPN1
KIF5C
PPT1
GTF2H2C_2
GTF2H2
REEP5
ZC3HAV1
C1GALT1C1L
GADD45G
FAT1
SIRT6
LHX1
FDXACB1
C11orf1
ALG9
MAST4
SAR1B
ZNF775
SLC4A9
REST
PMF1-BGLAP
PMF1
C9orf40
LPCAT3
CREB5
EPB41L2
PRC1
MTDH
KDM5B
BMF
LRP12
TAF10
SYNJ1
RRP8
MRPL39
ILK
TMEM121B
MFAP3L
HPCAL4
FAM227B
DTWD1
TLE1
SMPD4
MZT2B
BCL6
ANKRD18A
RNF103
USP37
TULP4
IFT52
CNOT9
NRSN1
IQSEC3
ERLEC1
ASB3
OR8B3
MMP8
GGT7
E2F2
ACSS2
ARHGAP28
ZNF839
ZNF358
TLCD5
SLC17A5
MMP24OS
MMP24-AS1-EDEM2
MCOLN1
LRAT
IGF2BP3
TTC39B
ZNF341
TNPO1
HMOX2
ZBTB45
SLC27A5
ZNF487
UROC1
REEP6
PICK1
PCSK4
NMRAL1
GRN
FRA10AC1
FAM171A2
EIF2B2
CHST13
STOML2
RFESD
PIGO
NCOA5
MEX3B
CCNH
BAIAP2L2
BCAP31
ABCD1
GOLGA6L10
GLRA3
CDKN2AIPNL
AVPR1B
AQP2
AGO3
RNF11
PTBP2
CRBN
BPTF
TMEM250
SHF
RTP3
LTF
CEMIP2
ADGRA1
SLC1A1
HEXB
CHN2
CDH15
MOB4
PXK
MNAT1
CPVL
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
NAV2
UGT1A4
UGT1A3
TCEAL8
LOC728392
TMEM215
RTN4
RNF6
ERMP1
CXCR5
SLC44A1
DCP1A
NCOR2
SCOC
ACSL3
PINK1
RWDD1
PCBP1
MRGPRG
LRCH1
KLHL18
KIF9
GRID2
EXD1
CPNE4
CHP1
CTNNB1
LEKR1
TBPL1
GARS1
DDIT4
MYO6
WBP1L
USP42
UBE2D2
TPI1
SPSB2
ZNF395
ZNF197
EXOC2
ERI1
COL26A1
CBWD5
CBWD3
LAYN
CAMSAP2
TMEM132A
STX16
PDE1C
GRM2
CCNL1
C5orf34
SPATA18
POLR3E
KIAA1841
BCR
MRPL2
KLC4
CUL7
AK3
SOCS2
PTGER2
OXTR
LRPAP1
RPGR
FOSL2
PDE4B
BRIX1
FGF1
ROR1
USP53
PPIH
OPRM1
MANEA
PURA
TBC1D14
TCF7L1
FXR1
ERBIN
CECR2
ARHGAP26
MDC1
TUBB
ZDHHC23
ZCWPW2
SMIM10L1
RFX4
PRH1-TAS2R14
OPN1LW
NUDT2
KIF24
FNBP1L
AZI2
VPS28
GLIPR1L1
CAPS2
HSP90AB1
ELMO1
XYLB
OAZ3
MRPL9
HTR1E
EHD4
CERCAM
LAMC2
S100A2
LPIN1
ZNHIT3
HMGN2
NTSR2
NPIPB9
NFE2L3
KLF17
BICD1
NDRG2
ZNF641
ARHGEF40
ZNF251
OSBP2
HECTD1
GTF2H2C
GLS2
GDF7
AAR2
UBA1
PIK3R3
TRIM65
MRPL38
VCAN
GABRG3
ITGB1
HEXIM2
TMEM170A
TFAP2D
SLC24A1
NGFR
MRM3
INTS14
GLOD4
AKAP12
GADD45B
ZNF354A
KBTBD2
URM1
TDG
ST6GAL1
PDE8A
NMNAT2
HDAC2
EYA3
CFAP161
C12orf73
ATP1A4
DESI2
FABP6
NPIPB6
NCBP3
MARS2
MAP2K1
LIG4
HEY2
EIF4G1
CDC42EP3
B3GLCT
ATP23
ABHD13
BHLHE40
LHX2
TFAP2B
EFHD1
CPLX2
PRDX1
TTC9
HERPUD2
ZNF385A
ZFHX3
ULK2
NCKAP1L
NANOG
MSRB2
MEIG1
MAPK15
KATNA1
IFNGR1
HABP4
FAM120B
ELK4
DNAJC10
DLL1
DCLRE1C
CLN6
CHD4
CCDC166
CCPG1
C15orf65
KSR1
ZNF654
WNT5A
GNAI2
CGGBP1
PRMT5
KIFC3
UCHL1
PRMT9
PHIP
NUDCD3
NIT2
FCHO2
VDAC1
ATAD2
KCNH5
SOX12
SIT1
PLEKHM3
PDE8B
NXPE3
NLGN1
NAALAD2
MLLT6
GGH
FYN
CCDC107
CBWD6
ARHGEF39
AMFR
FRG2C
C12orf42
MCM7
AP4M1
ZNF165
OR1F12
SEC62
TMX3
OR6J1
METTL2A
FGF19
CCDC102B
AKAP9
CHIC2
LIMK2
MED23
ENPP3
USP22
TUT7
TLCD3B
SDHA
RIPK4
PRDM8
PET117
MTARC2
KAT14
FLOT2
DOC2A
DHRS13
CYP2R1
CDK6
CCDC127
C16orf92
DHRS3
ARL6IP1
THAP4
GNAS
KIRREL1
IQCH
EPCAM
BTC
ATG4B
AAGAB
NOTCH2
UBE2B
CDKL3
TRIM9
SLC35E2B
RUSC2
RMDN2
INTU
ESCO1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PDLIM7
MTF2
ZC3H6
GTF3C3
C2orf66
SETD7
MDFIC
L1TD1
HIVEP2
CYP26B1
BAIAP2
CLTC
ZNF860
ZNF772
ZNF419
XRRA1
TGFA
SPCS2
PRUNE2
PRKAA1
OSBPL10
MKX
FAM151B
EXOC6B
ANKK1
CCNI
RUBCN
NR4A3
LRRC37B
FYTTD1
DMRTA1
AMPH
CDC37L1
RNF224
RNF208
CYSRT1
SLC39A6
SLC34A3
SALL2
GPC6
MBOAT2
GATAD2B
UCHL5
TEKT3
SLMAP
RO60
INKA1
CORO2B
CDHR4
TMEM242
SLAMF1
FAM222B
ZNF48
SYN2
TOR2A
RTKN2
PROSER1
PPARGC1A
PHTF1
PABPC5
NHLRC3
CRYM
ANKRD12
TEFM
TDRD9
TBL1XR1
STX18
RIMBP2
PLCH1
NRSN2
FAM177A1
COL23A1
C9orf85
ATP5MPL
GNAL
RBM15B
MANF
TRIAP1
PDE4DIP
MMP2
COX6A1
TCTEX1D4
PLK3
BTBD19
DSTYK
PARK7
TPD52
UBTF
SKA3
RPTOR
MRPL57
KLHL23
FGFBP3
DNAJC3
IL20
FILIP1L
DCP1B
RAD54L2
HES1
PHACTR2
TMEM267
SPEF2
SFRP2
NDUFS3
KBTBD4
IQCF2
FAM180B
FAM153B
ADAMTS3
RBPJ
TAF12
OR2AT4
CCDC71L
UNC45B
SPAST
SLC44A2
SLC30A5
NLE1
DNAJC19
CYP2U1
ANKRD50
NOTCH2NLA
UROD
HECTD3
SLC35A3
SPOP
MTMR6
MPZL1
METTL9
LLPH
FAM98B
DYRK3
C8orf37
TMEM263
AFF4
SUMF2
SOWAHA
FAM221A
EXD2
EPHA1
EEF1AKMT1
EBAG9
CALB1
ASAP3
KTN1
STMN3
RTEL1
ZWILCH
SNAPC5
SIK2
RPL4
NKX1-1
NFKBIA
MAP3K4
FAM107A
BORCS6
ADNP
AMN1
TIPARP
HNRNPR
HCN1
GALNT15
BLMH
KDM6B
CALM2
KANSL3
TMEM37
STEAP3
PAK1
NAA40
IZUMO1
HTR7
GNG3
FUT1
FGF21
FER1L5
CRYBG1
CNTN4
CDKN2A
CCDC69
BSCL2
ATAD2B
AFG3L2
ARIH1
SCAF11
TSTD1
SST
SLC2A9
SEPSECS
NAT8L
KRT82
KCNQ3
F11R
DDHD1
CEP192
SCAPER
PAWR
RBMS1
MND1
FUT8
EBF2
TGIF1
PPP1R13L
POLR1G
AMOTL2
NR1H3
ACP2
SLC7A8
PSMD8
MUC12
LYRM1
KCNH1
DUSP15
DLX6
DCUN1D3
C15orf40
CRYAA2
CRYAA
SOCS3
RCOR2
INTS12
HIPK1
GSTCD
GAREM1
FKBP5
CTSL
ARMC12
VDAC2
CCN2
SERPING1
RNF166
METTL16
CTU2
AIFM3
NOTCH2NLB
LONP2
ABCC11
ZNF608
RCL1
PLCL2
SNTG1
SEMA6A
POLD1
PLAAT1
PAFAH1B2
METTL2B
FAM83B
ARID2
TSKU
GAD2
VGLL3
SSBP2
STK17A
VPS18
TPTEP2-CSNK1E
TPK1
TJP3
THOC2
SYDE2
SEC11A
MRPL40
IGDCC4
HIRA
GEMIN4
CDX2
CCKBR
BEST4
B3GALT1
AS3MT
HNRNPA2B1
CBX3
SLC35E1
TTC14
POT1
MEF2A
MAP2
KCNN2
FBXO10
EIF3A
CNTN1
CHST15
CFHR4
BAZ2B
FOXN3