ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150671 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
ITGB3BP
EFCAB7
MAPRE2
RABGAP1
YPEL3
STC1
DUSP6
MTRNR2L8
ZNF623
RABGAP1L
SF3A3
RBBP5
YWHAQ
ARHGAP39
RCAN1
PDE11A
ZNF829
ZNF568
ZFP30
MTF2
ATF7IP
NUF2
COX16
TMEM132A
SAMD4B
GABPB2
GBA
KDM3A
SLC33A1
NDUFB3
FAM126B
MTR
ZNF117
RPL27
PAXBP1
TBC1D19
ISY1-RAB43
ISY1
SUPT7L
SLC4A1AP
SSBP1
DISP1
ATP5MC2
GLIPR1L2
DNAJC25-GNG10
DNAJC25
CALCRL
TTI2
COX7A2
RNF125
UTP3
COL4A6
COL4A5
TFPT
PRPF31
TRIP4
ZNF408
ARHGAP1
TBL1X
AURKAIP1
DMAP1
GTF2H4
GYPC
CBX1
DNAJB12
UFC1
SULT1C4
JMJD1C
ZNF571
ZNF540
AHCYL1
RPS7
TM2D1
RPS29
NOP16
HIGD2A
ALG14
CREM
CEP85L
COMMD2
ZNF461
HDAC8
MMACHC
CCDC163
PPIP5K2
GIN1
ZMPSTE24
COPS4
VTA1
NMBR
CCDC59
RERE
FBXW7
AASDH
ITFG2
ZSCAN22
RAB30
NUP107
MED23
PIH1D2
NKAPD1
CFAP298-TCP10L
CFAP298
HEATR1
MNAT1
TEFM
ILF2
TTC26
CAT
EIF3F
MRPL1
TTC32
PEX3
ADAT2
NDUFS7
TMEM242
BRF2
POLR3B
GRPEL2
PAFAH2
TACO1
TRMT11
WDR11
TRMT5
SLC38A6
TMEM259
STAT3
EPHA3
DDX41
MTRNR2L2
ZNF165
NME1-NME2
NME1
MRPL48
KDM1A
RCAN2
EPRS1
HLA-E
CDK19
AMD1
RAD51AP1
C12orf4
AP3S2
SAR1B
RNF187
CLTB
C8orf37
GTPBP3
SLC25A53
FAM234A
SELENOH
PIKFYVE
ZNF391
EIF2S1
ATP6V1D
RPL37
NEMF
CDC5L
PPRC1
IL17F
INTS2
BORCS7
PUS10
PEX13
POLR2J3
ATG4C
RPS26
MAST2
INTS5
FAM13A
ZNHIT6
TRAPPC8
MYO1H
RBBP9
REXO4
RAB18
MAN2A1
FOXO3B
ZSCAN30
IARS1
EIF1AD
BANF1
CPPED1
CCNI
ZNF383
BAIAP2
BMS1
CCDC174
SF3B5
DQX1
HAX1
MITD1
IFTAP
SMG8
BCL2L13
SNRPD1
SLC45A4
PCDH15
FRA10AC1
INO80B
DHX16
FAIM
LSG1
CCDC107
SLC24A1
INTS14
ZNF791
ZNF490
TNPO3
NOL8
CENPP
EIF2D
NEU1
PPIL3
NIF3L1
RPL5
MRPS23
NOS3
TRMO
EFHD1
MED18
TTLL12
DCT
CWC25
SPAG9
TMEM41A
AP1G1
RPA2
LURAP1
KRR1
HTR5A
SMG5
SMG7
VPS35L
MRPS18C
HELQ
SNRPD3
GUCD1
LUC7L2
FMC1-LUC7L2
RTTN
FMC1
RPS3A
PLCH1
ELAVL2
RBM45
VPS52
RPS18
ZNF790
SIAH1
THAP10
LRRC49
RNF207
LRP6
KDM5C
MOB4
CCDC97
PDCD6IP
CSRNP3
PDE1A
DYRK4
DRG2
PPP6R1
SNIP1
PNMA2
LRCOL1
REEP3
SKP2
LMBRD2
TUT1
TMEM101
PES1
TARS3
PACSIN2
PPP1R11
GTF2H2C_2
GTF2H2C
ALKBH3
ZSCAN25
FDXACB1
C11orf1
DCLRE1B
AP4B1
ZNF570
ZNF569
NCOA7
ARMCX5-GPRASP2
ARMCX5
UBR2
CCNC
DCP1A
PDGFD
ZDHHC6
VTI1A
GSTA4
ZNF226
RFFL
RUNDC3B
SLC18B1
RAB5IF
AARS2
RIF1
MDC1
DSTYK
ATG5
ZNF793
POLG
FAM199X
INO80C
IRF9
CFHR4
TMEM275
ZNF134
INSYN2B
NECAP2
PNISR
DHTKD1
MRPS16
POLDIP3
TMBIM6
WDPCP
MDH1
PARP2
FAM124B
WDR74
RANBP2
ZNF585A
WDR36
ARID5B
OSGEPL1
RPS13
SCNM1
LYSMD1
LTN1
TOMM20
FAAP20
CSNK1E
GCNT2
TRUB2
COQ4
SYT1
LRIG2
SLC39A9
ERH
CFAP20
DNM2
MTOR
SLITRK5
ALG10B
KANSL3
SEC23B
CREB5
HBS1L
PPIG
ZBTB45
TXN2
CALCB
THG1L
BRAP
ACAD10
HTR3A
MTBP
MRPL13
PSMD9
HPD
ZNF292
YJU2
POC1B-GALNT4
ARRB2
ZNF566
RPS14
CSTF2T
SLC39A6
CCDC120
CLPTM1
KAZN
PLK2
STX18
PLK3
SSH2
ACOX3
TRMT44
CLASP2
SNRPE
ZNF350
PNPO
ZNF302
AIFM1
RPTOR
UTP25
GSTP1
DEDD
PTCHD4
MRPL54
APBA3
UBOX5
FASTKD5
AJUBA
ATP5F1B
KLHL20
GTF2B
ANKRD13C
NRL
DCAF11
IFI6
BANP
CC2D2B
MED11
CEP120
SIKE1
VPS45
COA6
NSA2
GFM2
CDIPT
POLR1H
DCP1B
NUP205
SF3B6
FAM228B
TPK1
TMEM30A
CREBL2
DDX39B
NR1H3
ACP2
OPA1
RMND1
ARMT1
TRIM5
ALG10
CHMP7
CD2BP2
S100A13
S100A1
PRIM2
PRRG2
NOSIP
CYCS
CALD1
SLC35A3
SUGCT
MPLKIP
SREK1IP1
CWC27
GALK2
COPS2
SLC35B1
PPIH
IRAK1BP1
PEAK1
HMG20A
FRRS1
GTF2H2
TSFM
TPR
ODR4
RWDD1
CDK5RAP1
SNRPB
LOC102724265
TMEM208
LRRC29
RNF146
DNAJC16
TLR3
SRP9
STOML2
TRIM46
KRTCAP2
FOXP1
FEM1C
ACTL8
TNFRSF19
PPOX
ZNF331
COIL
ZNF687
NEK2
CNIH3
DDX18
TMEM128
AGPAT3
CCDC130
PLAC8
LOC100421372
HSPA14
CDNF
FLRT3
CORO2A
SLC30A6
RPAP2
GLMN
ZNF48
PDE7B
CCDC124
IPP
TIMM9
KIAA0586
ZNF442
YTHDC2
UCHL3
COMMD6
VPS33A
ZNF527
MAD2L1BP
GTPBP2
C6orf118
NHS
LSM5
HDAC2
ECHDC1
ANXA11
C11orf65
SBNO1
OSGEP
APEX1
ERAL1
C3orf14
TTLL1
ZNF561
NOL12
PRPSAP1
AMACR
FNTB
GLIS2
WDR55
STAT6
RPS12
LMNTD1
B4GALT3
TXLNB
CLN3
TMA16
CCNL1
USO1
APOL2
ZFYVE1
APRT
SCYL3
HIPK1
RGL2
SLFN12
B3GALNT2
HMGB1
USPL1
C2CD5
CDK12
ZBTB8OS
RBBP4
DRAM2
CEPT1
SH3RF2
ZNF56
BPNT1
ST6GALNAC2
CEP85
TATDN3
NSL1
TDP2
ACOT13
PLEKHM3
ARL14EP
AAAS
RSPH3
FAAH
SCAND1
SOD2
WTAP
C11orf49
GPN3
FAM216A
HIGD2B
BBS4
METTL18
C1orf112
CD55
ZNF345
SULT1C2
SNAPC5
MRPS31
FABP6
NR1H2
DYNLRB2
LAMTOR5
TMED1
SNX17
EIF2B4
LIN54
TSTD3
NBPF1
NAT10
ACTR3
CHST4
MIER1
GOSR1
AP3B1
UFL1
DNAI4
TCTEX1D4
BTBD19
SRCAP
LOC730183
CSTF1
AURKA
SDHAF3
CUL5
DPYD
UBE3B
CGGBP1
C3orf38
SRSF11
LRRC40
TAF13
TFB1M
NPAS4
INKA2
DDX20
CTH
B4GAT1
EXO1
CEP162
COG2
HMGCR
AKR1A1
IPO4
MRPL40
HIRA
RRN3
CYB561D1
TTC14
GTPBP10
INPP4B
SMIM13
ABLIM1
ATP1A1
CRNKL1
CFAP61
IGFL4
MTIF2
STK32C
ABCD2
MEGF8
DCLRE1C
SESN1
CEP57L1
ZNF286A
VPS25
SRP54
SYNJ2BP-COX16
SYNJ2BP
FKBP8
ZNF221
RSPH4A
TOR1AIP1
NUP54
NEK4
CCNT1
KIAA0319
LACTBL1
CYB5R4
STK40
AP2A1
SFSWAP
CCT8
EFR3B
PHIP
MAGOH
ASXL3
CRY1
RGPD1
RGPD2
MRPS33
SPATA5
NUDT6
PDE12
RPL26
ZSCAN26
AFG1L
HAUS6
ZNF2
SHC3
PSMF1
SMU1
WDR5B
RIMBP3
RUVBL1
PCBP2
GPATCH3
AQP10
GRN
BVES
ANKRD54
DHRS13
TMEM116
ERP29
ELOVL1
PRR14
RANBP17
SULT2A1
RNF220
CUL2
PLPP5
GPATCH4
NRDE2
R3HCC1
HECTD1
FKBP5
CYB561A3
TMEM138
SNRNP35
PRDM1
H4C15
H4C14
CEP350
IL1RAP
VPS13B
PSMD6
OAZ3
MRPL9
CCNG2
MAST4
BAG6
QRICH1
ATG101
PLS1
VPS29
RAD9B
JOSD1
CPN2
ZRANB2
SLC1A3
NSUN4
MICU2
FKBP7
CZIB
FOXP4
SLC25A21
ZNF613
ZNF585B
PIF1
PLEKHA3
RAB37
MRPL42
UBE2L3
COX18
RIMBP3C
RIMBP3B
SPATA18
RNF216
RAMAC
CLCN3
TRIM59
PPP6R3
FDPS
RHOJ
UBA1
INTS12
GSTCD
N4BP2L2
ZNF484
TBRG4
ADGRL2
SENP1
PFKM
FBXO38
RPL34
FBXO8
CEP44
NAV2
IFIT3
SRA1
FAM133B
THOC5
TBL3
PARPBP
NUP37
ANO6
PSMD3
SLC2A4
COPS7A
METTL7B
TTC4
ACTR6
FASTKD2
MFSD6
ZNF510
TBC1D9
GPC6
COA3
CNTD1
TBC1D32
SLC25A51
AAR2
GABPA
ATP5PF
TYSND1
EIF5B
TXNDC9
SASS6
PRKAG2
TSSC4
MTMR9
TMEM144
DARS2
CENPL
ZNF562
TTC21B
KDM8
SLC35A5
ATG3
DLAT
DYNC2LI1
BTD
ZKSCAN8
HACL1
GTF3C3
RALBP1
SRRM1
MRTFB
MRPS14
CALM2
NUP155
NECAP1
FAM185A
CCDC150
CHCHD6
OGT
RCC1
PSMB5
LMNB2
TMEM167B
ECI1
PIGL
MAP3K7
DNAJC24
DCDC1
C18orf21
N6AMT1
CCR7
CES3
FGFBP3
RPS15
SLC35A1
RNF144B
C6orf226
ELP3
KIF2C
TIMM17B
PQBP1
C17orf75
ATP10D
NOL11
HINT3
ZNF589
TMEM69
SRSF10
CDIP1
OTUD3
CWF19L2
PPP2R5C
NKX3-2
RBM25
CCDC90B
ZNF300
SAE1
GOLPH3L
POLR3A
OAT
ARIH1
STX16
PRMT3
UQCC1
DDX42
CCDC47
CDKL5
TBX18
GJA1
ZSCAN31
TMEM248
SLC35A4
APBB3
MRPL24
ZNF254
SNRPB2
ATP5MF-PTCD1
ATP5MF
RBM7
C11orf71
BCHE
RPL6
HIF1AN
LZTR1
NXT2
SORBS2
ATR
C19orf48
FUT10
ZNF846
DHX8
PROS1
COQ3
ADAM15
CNPY2
PRPSAP2
MYO18A
RPLP0
NUDT13
GTF3C5
ZNF518A
SAYSD1
HSPA9
USP16
TSPAN2
FBXO22
DYNC1I2
OSBPL8
P2RX6
ARHGEF6
CCDC43
ZNF684
EEF1AKNMT
LMAN2
TBC1D22A
PKIB
TYW3
CRYZ
CENPW
RLF
RBBP6
MIDEAS
TTC1
SERINC1
SLC22A4
GNAL
CNTRL
MGST3
C5
TOMM40
ABCB8
PCNP
MTO1
ZNF215
PPARGC1A
SYNPO2
EMC4
RAB3GAP2
MAP2K5
CDC73
RAD52
MFSD8
ABHD18
NUDT15
ZNF335
ZNF260
GAPDH
SEC22B
RPS19
UBXN4
RBM34
ZNF700
HIKESHI
STUM
SEC16B
TIGD1
EIF4E2
S100A4
SRSF7
AGBL3
ANXA2
GALT
HERC5
ZMYND11
RPAIN
NUP88
ENPP4
CLIC5
TCEANC
SLC39A3
PSMA1
SIRT4
KBTBD3
AASDHPPT
ARHGAP24
TIMM22
COX7A2L
CDKL2
ATP5MC3
U2SURP
RRP15
RBIS
LARP4
CBWD5
CBWD3
CBWD6
TBRG1
RPL22L1
ABRACL