ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
ITGB3BP
EFCAB7
YPEL3
CBX1
ZFP30
MTRNR2L8
RABGAP1
STC1
RABGAP1L
ZNF829
ZNF568
DISP1
MAPRE2
GBA
DNAJC25-GNG10
DNAJC25
PDE11A
ZNF623
SAMD4B
COMMD2
MTF2
SF3A3
YWHAQ
DUSP6
RBBP5
RNF187
NUF2
COX16
UTP3
CLTB
TBC1D19
ZNF292
TMEM132A
ATP5MC2
TMEM41A
ZNF566
ZSCAN22
RPS7
TRMT5
SLC38A6
TOMM20
SOD2
WTAP
TRIP4
GTF2H4
HTR5A
RNF125
RWDD1
CCDC174
SSBP1
MAN2A1
EPHA3
TSFM
TTI2
ATP1A1
CAT
RERE
CEP85L
SELENOH
NEMF
NDUFB3
FAM126B
SLC24A1
INTS14
MED23
ZNF570
ZNF569
CWC25
MRPL1
ARHGAP39
GLIPR1L2
ZNF117
PEX3
ADAT2
AP3S2
PDE1A
PNMA2
BMS1
GTF2H2C_2
GTF2H2C
SLC45A4
BRAP
ACAD10
LRCOL1
TTC26
TTLL1
PAXBP1
MNAT1
DMAP1
MTR
FBXW7
ZNF790
PPRC1
TMEM242
CDC5L
RAB18
JMJD1C
NR1H3
ACP2
MMACHC
CCDC163
THAP10
LRRC49
RBBP9
FGFBP3
FAM13A
SNRPE
CFAP298-TCP10L
CFAP298
PDCD6IP
SMG7
NDUFS7
KDM3A
DNAJB12
SIKE1
CCDC130
TTC32
TDP2
ACOT13
HDAC2
FRA10AC1
PAFAH2
RAB30
PPIH
MRPS18C
HELQ
BANP
RAB5IF
APRT
NME1-NME2
NME1
NEU1
ZNF226
ZMPSTE24
CCDC59
MRPL48
CALCRL
CHCHD6
FAIM
SKP2
LMBRD2
TFPT
PRPF31
TARS3
IARS1
REEP3
PDGFD
EIF2D
SLC33A1
GABPB2
TMEM208
LRRC29
RUNDC3B
MTRNR2L2
ZNF391
PARK7
RANBP2
NUP155
RCAN1
POLR3B
POLDIP3
SLITRK5
TMEM38A
SMIM7
RPL27
ZNF571
ZNF540
LURAP1
PUS10
PEX13
KANSL3
RBM45
ZNF300
RTTN
PNPO
HAX1
MRPS14
CCDC107
TRMO
ZNF350
STAT3
NECAP2
SYNPO2
ZNF687
WDR11
MRPS23
SMIM13
TMEM259
RPS29
TACO1
SAR1B
PKIB
SERINC1
CCNC
GALK2
SNRPD1
COPS2
PARP2
ATP6V0E2
TMEM43
CHCHD4
RPS3A
ZNF527
DCP1A
TEFM
ZNF165
GOSR1
BAIAP2
HEXA
STOML2
RPA2
ZNF354A
ZBTB8OS
RBBP4
FAM199X
NCOA7
GTPBP3
RIF1
TIGD1
EIF4E2
ZNF791
ZNF490
ANO8
MYO1H
RPS14
RPL5
SLC35B4
TTLL12
MOB4
TBL1X
CDK19
AMD1
VPS45
SLC3A2
FAM174A
REXO4
CUL5
DCT
PIGC
STX16
BORCS7
RPS13
ECHDC1
ZNF285
SULT1C2
AURKAIP1
DCLRE1B
AP4B1
INTS2
CCNL1
DSTYK
EPRS1
EFHD1
CLPTM1
MRPL40
HIRA
NUP54
PIH1D2
NKAPD1
NUP107
SLC25A16
LRP6
SF3B5
STX18
DRG2
MIER1
DNAI4
EIF3F
COX7A2
SLC35A3
POLG
MRS2
LUC7L2
FMC1-LUC7L2
FMC1
POLR1F
EXO1
RPL37
ZNF383
PCDH15
NOS3
NOP16
HIGD2A
SPATA18
PPIP5K2
GIN1
MITD1
NBPF1
COPS4
CDC73
HECTD1
NRL
DCAF11
ZSCAN30
KRR1
TOGARAM1
KLHL28
DYNLRB2
FDPS
ACTRT2
WDR36
TGFBR2
GPR137
SUPT3H
TRIM46
KRTCAP2
TAF12
N6AMT1
GOLPH3L
ALG10
CHEK1
MTMR9
MRPS33
RRN3
MFSD8
ABHD18
HIGD2B
BBS4
OSGEP
APEX1
CDKL2
CDK5RAP1
GSTA4
NOL12
PPP1R11
PPOX
RPS12
DAXX
AFG1L
GPR89A
CCDC97
DDX41
ATG5
STXBP3
TRMT11
OAZ3
MRPL9
LAMTOR5
CCDC120
SLTM
PPIG
GRPEL2
TPR
ODR4
UBOX5
FASTKD5
LRRC59
GABPA
ATP5PF
NMRAL1
HMOX2
TMEM106B
ZNF793
ZNF561
ITFG2
PHIP
SRP9
HIPK1
PRDM1
FOXP1
GPN2
FOXO3B
METTL9
DDX46
CSNK1E
IPO4
TNPO3
POLR3G
MBLAC2
ZNF56
P2RX6
PNISR
ABCB10
UBR2
H2BU1
H2AW
SUPT7L
SLC4A1AP
LOC102724265
PES1
ZNF846
DCP1B
ZNF501
MICU2
BRF2
HEATR1
INO80B
TCTE3
ERMARD
TSTD3
DCAF8
SYT1
CLN5
SNX14
RAB37
ATF7IP
TSEN15
WDR74
PLS1
TRDMT1
SLC2A4
SRP54
SLC25A21
C3orf14
ZSCAN31
HMGB1
USPL1
ZSCAN25
HBS1L
EIF3D
MTIF2
DHX16
ALG14
PSMD11
ALDH9A1
TMEM116
ERP29
BAG6
VPS26C
SLC30A5
NUP205
CPPED1
ATG4C
ABCA3
SLC25A53
ZCWPW2
AZI2
VPS35L
RIMBP3C
RIMBP3B
IRAK1BP1
IST1
KLHL32
TXN2
DPYSL3
WBP11
C12orf60
C8orf37
CRNKL1
CFAP61
DEDD
CYCS
CHD1
CALD1
TMEM222
CYB5R4
ANKRD36B
ZNF783
UFL1
MRPL24
INPP4B
AQP4
DHTKD1
ZNF335
BOD1L1
SLC17A5
RSL24D1
H4C15
H4C14
DNAJC19
C11orf65
ASCC1
ANAPC16
MED18
IRF9
GORASP2
GTF2B
VPS25
ZKSCAN8
TAF13
NMT2
DUSP12
EXOSC10
MRPS31
TRUB2
COQ4
SF3B6
FAM228B
TPK1
DNAJC24
DCDC1
GTPBP10
CCDC124
RPAP2
GLMN
TAF3
MRPL45
RUFY4
ACOX3
TRMT44
VTA1
NMBR
SNIP1
TMA16
CCNI
SEC23B
THG1L
DHRS13
RAD54L2
FAM234A
PLCH1
UCHL3
COMMD6
UBE3B
UBE2L3
IPP
INSYN2B
PLD4
FBXL19
NLGN1
SULF1
SMPDL3A
PABPN1
CEP85
PUM1
WDR55
RPS26
ZNF518A
OSGEPL1
BCKDHB
TBRG1
TMBIM4
PARPBP
NUP37
MED11
GAR1
IPO7
ZNF345
LSM5
COG2
ATG101
ARL14EP
RALBP1
PACSIN2
RNF144B
ZNF408
ARHGAP1
RNF6
AASDH
TIPARP
CIZ1
RFXANK
BORCS8
KBTBD3
AASDHPPT
SAYSD1
PEAK1
HMG20A
ZNF589
GPATCH4
JOSD1
C6orf118
VPS13B
GPAM
MAST2
FBXO22
HDAC8
HMGN4
MYO18A
SRSF7
CFAP410
WDR62
THAP8
POLR2J3
OPA1
NSA2
GFM2
R3HCC1
CFAP20
ZNF582
WDHD1
SOCS4
ABCB8
ASCC3
CORO2B
PPM1J
MRPL21
IGHMBP2
BTD
EIF3E
ZBTB45
QRICH1
C2CD5
PSMD6
CSDE1
TM2D1
FDXACB1
C11orf1
MRPS35
HACL1
PGM1
TMEM59
RIOK1
CAGE1
INTS5
INO80C
SUGCT
MPLKIP
ZNF3
EIF2S1
ATP6V1D
ACBD6
ZNF461
NUDT15
RNF207
TNFRSF19
CYB561A3
TMEM138
LRRC10B
CCR7
ATL1
MZT1
BORA
DPY19L4
ALKBH3
WARS2
MRPL53
LOC100421372
HSPA14
CDNF
SAE1
C15orf61
ALG10B
TOR1AIP1
MTBP
MRPL13
SESN1
CEP57L1
RPTOR
UGGT1
HMGCR
LCA5
GPATCH3
PPWD1
CENPK
DRG1
CNIH3
GTF2H2
AARS2
SNX17
EIF2B4
ZDHHC6
VTI1A
ZNF331
SIRT4
UFC1
SPAG9
VPS52
RPS18
PDSS2
ESCO1
RIMBP3
RBM34
DDX18
DNAJC16
MRPL54
APBA3
CTH
NDUFA12
ZNF2
PPP1R9A
SNAP47
JMJD4
SMG5
LTA4H
CCNT1
MSL2
PCNA
MMUT
CENPQ
SUMF1
HMGCLL1
NDUFC2-KCTD14
NDUFC2
LTN1
MTRES1
RCAN2
ZNF529
TYW3
CRYZ
FITM2
SPATA7
NUDT5
CDC123
SHC3
TMBIM6
PCDH9
ZNF362
ASB13
SMU1
PSMD3
ZKSCAN2
GCLM
SETDB1
PAAF1
COA4
SULT1C4
CDK7
DYNC2LI1
PSMC4
RCCD1
METTL1
EEF1AKMT3
FAM71E1
EMC10
RNF182
UQCC1
NEK2
FANCI
MDM4
WDR5B
ZNF184
DCUN1D5
FBXL17
TMEM33
PPIL3
NIF3L1
GCFC2
CNTRL
C5
ZNF839
LYRM2
RBM7
C11orf71
BCL9
EIF2S3
SYMPK
ZBTB8B
FAM133B
MRPL3
PIKFYVE
IPO13
SLC39A6
C15orf40
ATP5MF-PTCD1
ATP5MF
ARHGAP19
PLAC8
BBS5
KPNA6
WDR4
DPH6
LMO7
KDM1A
IFTAP
FKBP7
MDP1
APC
CATSPERE
TSG101
COPS7B
NDUFS3
KBTBD4
MRPL42
YTHDC2
H4C8
TTC14
COX18
NSUN4
CUL2
ETFDH
C4orf46
KIF15
KIAA1143
GFER
FBXO38
NOLC1
IMPACT
NDUFB2
PYCR2
COX14
ARHGEF4
BCAR3
C18orf21
SMAP2
PPA2
MRPS16
PPP4R3B
SNX5
MGME1
TNFRSF10D
AKR1B1
IFNAR1
SLC25A19
TXLNG
ZNF772
DUS3L
FAM161A
RHOBTB1
DPP9
TIGD6
HMGXB3
HIBCH
NAT10
TMEM69
RLF
C2orf42
CNOT2
MSANTD3
PHTF1
TMEM126A
GDAP1
LRIG2
ROBO3
NUP133
THRAP3
TARS1
PHKG2
PSMA1
SPATA5
NUDT6
VPS33A
ZNF23
EXO5
DNAI3
HNRNPR
GNE
METTL16
DGKB
HSPE1-MOB4
HSPE1
HSPD1
DUS2
DDX28
AGBL3
KIFC1
EIF4G2
TRIM59
SH3BP2
N4BP2L2
BCL2L13
SEC31A
TTC37
ARSK
THAP9
CCDC77
TOMM40
C1orf53
C6orf226
RAB3GAP2
ANO5
ZNF432
NELFA
TERF2IP
KARS1
SCNM1
LYSMD1
HLCS
CMSS1
DLAT
VWDE
TFIP11
ABCD2
ZNF471
TTC23L
NDUFAF6
MEX3C
SRSF11
LRRC40
CEP350
MRPL27
EME1
WDR61
RAMAC
POLR1B
TTC4
PRPF18
PTPN4
GEMIN5
DYRK4
NEK7
FNTB
PIGO
ULK4
SRRM1
ACAT1
PIBF1
DIS3
TMEM19
RPL24
SORBS2
PANK1
RSPH4A
NMNAT1
LZIC
ZNF26
DYNC1I2
DNAH7
STEAP1
POT1
DDX21
CCDC146
GARS1
TRMT61B
ZNHIT6
AAAS
ZNF302
EIF3M
GLIS2
COQ10A
TPRA1
PMS2
AIMP2
OTULIN
CALR3
C19orf44
NDUFA4
ANKRD13C
PGD
PLCXD2
ABCF2
HTR3A
DNAJC11
DNAJC21
IPPK
PPP6R1
TATDN3
NSL1
AP3B1
MAGOHB
SRSF10
ZNF260
SRA1
MFSD4B
ZFP14
LZTFL1
SNRNP70
OTUD4
RPLP2
ATP10D
FAF1
MFAP3
FAM114A2
SDCCAG8
CEP170
IL1RAP
H2BC18
RBBP6
ZNF764
HSCB
CHEK2
CBWD5
SPEF2
NGDN
CLCN3
PMVK
NFU1
MIF
LSM6
CASP8AP2
ZNF112
STAT6
MRPL19
CLGN
PPIL2
CRTAP
UTP6
DSCC1
ZNF497
ST8SIA1
COA3
CNTD1
TXLNA
H4C1
H3C1
ILF2
POLR1H
ATP5F1B
ATP8A1
ATL3
GTF3C6
EXOSC9
GCA
RNF135
SUV39H2
CC2D2A
INTS12
GSTCD
SMG8
ERCC6L2
SACM1L
RSAD1
COASY
ZSCAN32
ZNF174
KLHL2
CNTLN
ACP6
SREK1IP1
CWC27
WDPCP
MDH1
HERC3
PYURF
PIGY
MICAL3
NT5DC1
MRPS30