ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

DCAF12
MAMDC2
RLF
ZNF684
IPPK
ZMPSTE24
MTMR9
CAP1
EXO5
CD33
CCAR2
C8orf58
SCNM1
LYSMD1
ITGB2
GRPEL2
ZFP69B
SH3BP2
RPS19
GLRX
ALOX5AP
LAMP1
SPATC1
NFYC
NLRP12
CAB39
NCF1
CD1C
IL1B
TEAD3
NDUFS2
ADAMTS4
WDR74
RXRA
LGALS8
RAB24
PRELID1
TLE3
FCER1G
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PGK1
PGA4
GPBAR1
PNP
CSF1R
PGA3
WDFY3
CEBPD
MTF2
ZNF408
ARHGAP1
ZFP69
NCF2
HBS1L
SETDB1
PPT1
YES1
ADGB
MTPN
LUZP6
FLI1
CD244
FAF1
URM1
VPS33B
RNF149
TP53I11
ATP5MPL
TLE4
STEAP4
SMAP2
PGA5
SNRNP200
CMIP
PPP1R12C
FRG2
ARHGEF12
XRCC5
POMP
ARHGAP30
ZNF227
SUN1
MMACHC
MFSD2A
VCPIP1
C8orf44-SGK3
IL7R
TIGD4
ARFIP1
STK36
RNF25
APPL2
RUBCNL
EXOSC3
MDM4
MEFV
FCAMR
NUF2
RUNX1
FOXJ3
UXS1
CEACAM21
ITGAM
TMEM30A
TRIT1
IPCEF1
MRPS18C
HELQ
CCDC200
SREK1IP1
CWC27
PISD
VTA1
NMBR
DUSP7
TRPV4
MMP9
TTC14
FEM1A
RAB3IL1
CLIC5
MRPL24
SASS6
ABT1
PRR5
CITED4
CARD8
PPIH
PPIAL4F
PPIAL4E
PPIAL4D
SPDYE13
MSH6
SP110
NIBAN3
MIA3
KIFAP3
RASA1
MXD3
MED23
C4orf3
MED18
OAS3
IL16
HAUS6
OAS2
LCP2
TEP1
PDCD2
RNPEP
SELENOH
MTRNR2L2
MSH3
DHFR
SEMA4C
FAM207A
TEKT2
ADPRS
MED10
ARPC2
UNC45B
TRIM41
CD1A
PIKFYVE
GOLGA7
ZNF780A
DOCK8
ROPN1L
UBL7
NIP7
COG8
KLF2
FCGR2B
USF1
KBTBD7
OTUD7B
UBXN8
TNFAIP8L2-SCNM1
TNFAIP8L2
TSSC4
SLC12A6
RHEX
NOP10
NUTM1
SCAF11
NCSTN
COPA
COL9A2
SIGLEC11
TCF12
UBR7
GON7
CBWD5
CBWD3
CBWD6
RPL37A
ZNF56
BRIX1
ARID2
UCHL5
RO60
CD53
MTRNR2L8
C22orf34
INPP4B
ELOF1
B3GALNT2
TLR4
EPRS1
IFNGR1
UTP3
STK4
NECAP2
IL1RN
INAVA
HIBCH
ERMARD
MAP2K1
TMEM154
CHMP4B
GTPBP10
SDCCAG8
CEP170
DUX4
C6orf89
CCDC149
FAM227B
DTWD1
EXT1
PIGM
SERPINB13
TMEM39A
DBI
C2orf76
RMDN1
IFRD2
KBTBD6
TNFAIP1
IFT20
MPZ
ZNF484
EIF2D
ARPC3
TFB2M
CNST
RMND1
ARMT1
DCAF10
CXCL1
TUBA8
PGBD4
EMC7
METTL18
C1orf112
KCNK6
TMEM53
ARMH1
RASSF5
ZNF622
DAP
DEFA4
ARHGEF1
GPR68
RPL37
PA2G4
WDR70
FASLG
SUSD6
ZNF658
SCAMP2
ATP2B4
CTSG
INTS9
HMBOX1
PDLIM2
ADGRE1
AP1B1
ZNF410
DENND4B
NDFIP2
HIGD2B
BBS4
TIPRL
XRN2
RAPGEF1
NR3C1
UBAP1
MEF2C
CMTR1
TCTEX1D1
CCND3
CHCHD5
TRIAP1
RGL1
ARPC5
ZP3
FRG2C
THYN1
ACAD8
MTMR14
LRFN3
TATDN3
NSL1
TBPL1
GPAA1
EXOSC4
APOL6
MAPKAPK2
MARCO
FBXO38
IPP
LILRA2
SKP2
LMBRD2
ALDOA
COL8A2
NUDCD1
ZNF226
MAP1S
TMEM59
TCEANC2
HMGB1
USPL1
SNAPC3
AOPEP
HK3
STAU1
ZNF718
ZNF595
S100A8
ITGA4
EIF3D
TPRKB
CFAP298-TCP10L
CFAP298
MS4A3
SLC22A16
NOTCH2
DISC1
NOL11
CPNE5
ADAM10
SNRPC
PPIAL4H
PPIAL4G
TOMM20
RGS12
MIDEAS
LILRB4
GALK2
COPS2
HARS2
HARS1
PHIP
TOR1AIP2
TOR1AIP1
LRRC29
ERLIN2
KCTD5
TAF11
ANKS1A
MRPS23
SRSF11
LRRC40
ATG16L1
TLE1
TMEM104
NAT9
RNGTT
SDHAF3
PDF
FUCA1
AK2
SDHAF2
CPSF7
FCRL4
ALG10
NME7
BLZF1
IL6R
PRRG2
NOSIP
TBRG4
NSUN5
C1orf198
TPM3
TLE6
TRIM35
PTK2B
CUL7
LRRC46
VIRMA
DPY19L3
CYB5R1
EIF2B3
TMIGD3
ADORA3
FCAR
PRPF3
ISY1-RAB43
ISY1
PPP4R3A
SNX3
THOC5
PKN2
KIF2C
DNAJC10
EXOC3L1
E2F4
USP3
SMARCA4
MAGEF1
PLEC
PRAM1
TRIP4
GGPS1
ARID4B
FKBP1A
TACC1
FIGNL2
FAM200B
IRAK1BP1
RTF2
CCL22
SCAF1
RRAS
TPT1
LYPLA2
TBL3
TMEM33
TPK1
JOSD2
ASPDH
LMO2
WDR61
IKBKE
NDUFS3
KBTBD4
NCOA3
MOB4
DR1
PDPR
ZNF197
SAMHD1
TTC13
ARV1
KLHL20
LTB
LST1
SNAPC5
OSCAR
NDUFA3
BOD1L1
RTCA
XRRA1
SPCS2
GADD45B
SRP9
MRPL3
ZNF614
VPS25
PHB
BOLA1
TATDN1
NDUFB9
MFSD10
GHRL
MTRNR2L1
SNX19
SLC8A1
PEX3
ADAT2
DDX18
MTERF1
ZC3H3
CAVIN2
RPS20
NAT10
CMPK2
INTS12
GSTCD
MYBL1
ZNF668
ZNF646
NUS1
MAP3K7CL
CCT8
NUP133
ERI1
SCML1
SLC35F6
PTTG1IP
FBXO28
ATG5
MAML2
GPANK1
CSNK2B
LY6G5B
FBF1
LAMTOR5
NDUFA12
SEC31A
P3H1
TOR1A
PPIL4
HEATR1
WASHC5
NSMCE2
ASXL2
CERS2
ANXA9
MICOS13
HSD11B1L
TMEM43
CHCHD4
BID
TMX3
CCDC102B
DNAJC5B
NCF4
RAB1A
MRPS35
FCGRT
HSPA13
ZNF398
ZNF425
TRIP11
TBC1D8B
DUSP6
LRRFIP1
ZFYVE1
TMEM222
GTF2H2
GNA15
RAB44
ZNF221
CHMP7
PHACTR4
ZNF142
BCS1L
PPIE
ZNF350
DHDDS
ORMDL3
CBWD1
BIN2
SUCNR1
RGS18
ARHGAP18
ZNF224
PEX12
PRKCSH
CCDC151
GTF2H3
EIF2B1
TRAPPC8
AKR1A1
PHC2
MYL5
ATP5ME
DECR1
FPR1
SLC35B4
TMEM127
CIAO1
MMUT
CENPQ
AOAH
PIGF
CRIPT
A2M
UNK
H3-3B
ABRAXAS2
GTF2H2C_2
GTF2H2C
SCAND1
RCSD1
SNUPN
WDR55
MFSD4B
TRIM25
CHMP5
BAG1
PSMD3
TAGAP
RPIA
ALG10B
UBE4A
RNF139
MAPKBP1
RPAP3
MTIF2
TIMM10
LMBR1
UBAP2L
C1orf43
RBM45
PDE11A
MINDY3
TAF1B
CBFA2T3
SF3B1
TCHP
AHI1
RWDD1
SRPRA
NR1D1
BAZ1A
STK25
CCDC86
SRFBP1
PPP1R8
RPL5
RAB27B
HMOX1
WNT2B
S100A9
ABCF2-H2BE1
ABCF2
COX7A2
IBA57
RAD50
GNPAT
C1orf131
WIPF2
MAD2L1BP
GTPBP2
PDSS2
PSMD7
CEACAM4
WBP1
INO80B
EPN1
LARS2
MRPS14
ATG7
SPG11
FAM120B
TMEM121B
CD5L
NTAN1
SYK
CSF2RB
EDEM3
TNFSF10
CIITA
SYMPK
FOXA3
PPP6C
DUS3L
TERF2
CHMP1B
ARL4A
TNPO1
MS4A7
TMTC3
CEP290
SEMA4B
PARP10
GRINA
RPS6KB2
PPME1
C2CD3
KIZ
PTPN4
CAPG
TLN1
CREB3
PUM1
ZNF697
VPS26C
CLK2
MDN1
SNAP47
JMJD4
SLC24A1
COX5B
CCDC182
TIMM21
FBXO15
CLPP
LATS1
SLC30A5
SESN1
DCP1A
CEP57L1
TPR
ODR4
WDR7
NCKAP1L
THEM4
ICAM1
GIMAP6
PRCC
ZNF337
GET4
RPL38
MAGOH
CDCA8
C1orf109
TBC1D23
CCDC30
ATP6V1C1
KPNA5
OTUD6B
ZMYND12
PPCS
ZNF225
NKIRAS1
NFKBIL1
ATP6V1G2
RPL15
C1orf74
YTHDF2
CYB5B
RASA3
IL10RB
SUCLA2
ZNF3
ERCC6L2
COX6A1
TMEM115
PHLPP1
TOMM40
ADAR
WDR43
PIGBOS1
PIGB
DBN1
OR4D9
TIFAB
AGGF1
HLA-DMB
N4BP2L2
ARID3B
PEX19
LYRM1
DCUN1D3
WDR27
C6orf120
BATF
NCALD
SDSL
ACRBP
ZNF444
DMAC1
ATP13A2
TAF12
HAX1
UBLCP1
ZNF318
RAB10
SNX17
EIF2B4
TADA1
SRSF4
RANBP3
TBL2
VSIR
GYPC
BOD1
PAFAH2
TSN
ANXA2R
GNAI2
ETNK1
SLC33A1
RPL27
CLASP1
PICALM
AHCTF1
NMNAT1
LZIC
ZNF212
MUC3A
SECISBP2L
FRG1
ZNF547
TRAPPC2B
WASF1
CDC40
CTNNB1
MLKL
DCLRE1B
AP4B1
CALHM6
ADSS2
COX16
MTHFD2L
TMEM39B
RNF14
MPEG1
DESI2
NUP58
PLPBP
RAC2
BCL2A1
ETFDH
C4orf46
GRAP2
SRBD1
RIC8B
TRAK2
STRADB
CYP4V2
KIAA0513
MCPH1
ACSL1
DAPP1
VKORC1
RRM1
NOXA1
RARA
TCTEX1D2
TNFRSF1B
NUDT16
TIRAP
GPR137
GUK1
RPS12
RAPGEF2
GIMAP8
TMEM70
ELOC
FRA10AC1
RAG2
NUP42
IFTAP
NFE2L2
DNAJC16
CASP9
CD48
OR52K1
BRF2
TTLL4
SMIM20
RAB43
MIER1
DNAI4
THAP1
ZNF268
METTL9
SLC25A32
DCAF13
SHANK1
CLEC11A
RPL29
NDUFAB1
TMCO1
THAP12
GVQW3
SOD2
WTAP
PACC1
ZC3HAV1
SKIV2L
NELFE
RCHY1
LOC100289561
UBE2D3
NGB
CDC37L1
ABCB10
MYCBP2
KIFC1
PPIAL4C
PPIAL4A
TBCE
ADGRG5
ABHD3
CD274
RRS1
ADHFE1
SLC7A6OS
PRMT7
UBR1
VIPR1
DEF6
HMGCL
CPNE8
ZW10
SART1
LUC7L2
SMARCD3
SF3B5
RPAP1
MRPL45
RALB
CCT5
ATPSCKMT
ASNSD1
ASDURF
ANKRD33
PHF13
EML6
IPO8
ERO1B
MTMR6
SELPLG
EFHC1
STXBP3
UBR2
MRPS31
ZNF251
WDFY2
PPCDC
LSM2
P2RY6
DEFB1
PTGES
INTS1
DHX8
ZNF148
CCZ1B
SGO2
SP140L
CPT2
IRF2BP2
SLC30A7
EXTL2
LAMB3
C1orf54
APH1A
EEF1AKNMT
PLSCR1
GNB2
SEC22B
PEX2
IL19
SLC18A2
IL10
CRYZL2P-SEC16B
SLC30A6
PINX1
TNFSF14
CCL26
SIGLECL1
TRPM2
RALBP1
CDK5RAP2
THAP11
NUTF2
CENPT
RPL22
CCDC15
CLN5
SIGLEC6
ENPP4
SPHK2
RPL18
FAM83E
NDUFV1
SPRED2
ADA2
PATL1
ZNF749
DET1
MRPL55
TEX46
KDM1A
NEDD9
OSBPL7
RNF141
RABGGTB
TRIM37
TMCO6
HCK
TMEM101
CCNL1
YARS1
S100PBP
PPP1R15B
CFAP20
RFC2
TRA2B
SLC16A3
NKAIN1
PPP1R12B
NBR1
ZNF879
RBM34
EIF3E
RUFY3
TRMT11
CC2D1B
TRIM69
ADGRL2
SERPINI1
PDCD10
ATP5MF-PTCD1
ATP5MF
AP2B1
PCYT1A
TRAPPC4
RPS25
RTN3
RPS3