ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX535453 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◣ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
PHC2
EXD1
CHP1
SEMA6A
H4C14
STX16
DPY19L4
H4C15
FAM98B
STX18
MTRNR2L2
MSH3
DHFR
MRPL21
IGHMBP2
H4C12
DDIT4
SAR1B
GSTA4
NUF2
IST1
H4C11
AAR2
GBA
NR1H3
ACP2
TUBGCP3
FRA10AC1
MTRNR2L1
C17orf75
SMARCD2
NME1
SLC44A1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H3C15
H3C14
H2AC19
H2AC18
UCHL5
RO60
H3C13
H2BC18
GALK2
COPS2
DMAP1
TRPV2
H4C5
TPRKB
PHLDA1
SLC20A1
SF3A3
RAD54L2
FEM1B
RRP15
RCAN1
SLC9A1
JRK
GTF3C3
H1-2
RARS1
RASSF5
H3C3
H2BC3
DSTYK
TBC1D19
RPL37
SNAP47
JMJD4
DCAF10
VWA8
RBBP5
ATR
TATDN3
NSL1
TMEM107
EIF1AD
BANF1
NPAS4
H4C4
S100A16
MRPL16
CDKN2AIPNL
H2BC5
H1-4
RPS7
IFRD2
RPTOR
FLOT1
IER3
EIF2D
USP30
STX3
TOP3B
NDUFB7
NOTCH2
SELENOH
RAB5IF
MAN2C1
ACOT7
BCL9
WDR31
CDK5RAP1
DHRS3
KMT2C
TRIB3
ZSCAN30
FCGR2A
SIRT4
PCID2
CUL4A
MTRNR2L8
C12orf73
NDUFA12
SPOP
HPCAL1
BFSP1
DCP1A
GTF2H2C_2
GTF2H2C
STAT3
OGT
YWHAE
SNRPB2
DRG2
CLUAP1
C16orf90
H2BC21
H2AC21
H2AC20
PDE4DIP
SSBP1
TACO1
SPRY4
SCNM1
LYSMD1
COMMD2
VIRMA
TEFM
RPS6
WDR36
KLHL20
TRIP4
TRIAP1
C11orf49
HEXA
BNIP1
S100A2
LRRC47
METTL9
E2F6
CT45A10
LAMP1
SLC24A1
PEX3
ADAT2
NDUFS3
KBTBD4
MTF2
YARS1
S100PBP
CSRNP1
JUNB
IRS2
WDR24
ZNF212
HMGB1
USPL1
EEF1A1
VANGL2
LARS2
ST3GAL2
TEKT2
ADPRS
TMA16
KANSL3
FER1L5
H4C2
H3C2
H2AC4
SPATA24
ZNFX1
COL23A1
INTS12
GSTCD
MRPL44
EIF3G
MANBAL
SPATA25
CTSA
NEURL2
ADPRHL1
STAT6
VPS25
IPO4
MRPS23
FBXW2
AP3B1
PDE6A
GTF2H2
UNG
ALKBH2
TMEM101
CCNL1
TMEM256
NLGN2
PSMF1
RTN4
CHD2
IFI16
GPRC5A
PYDC5
DPY19L3
GSTP1
WWP2
SNX17
EIF2B4
PLEKHM3
NECAP2
ALG10B
GAB2
MRPL3
RPL32
ADNP
DNAJC24
DCDC1
GUSB
DPP9
NDUFS7
NOC4L
DDX51
TTPAL
VWA5A
TMEM242
ZNF391
AGMO
TOR1AIP2
TOR1AIP1
SLC3A2
CTSC
DMAC1
DDX1
RTF2
DNAJC25-GNG10
DNAJC25
GGNBP2
TBL3
RNF151
HTR5A
S1PR2
PAFAH2
NFXL1
WDR11
ARHGEF12
H4C6
NDUFC2-KCTD14
NDUFC2
EFNA1
SSBP2
STMN3
RTEL1
RBM28
SREK1IP1
CWC27
SNRPB
ARIH1
ATF3
TRUB2
COQ4
ZC3H6
ACBD6
H1-3
DDX23
TVP23B
NCBP3
PMPCA
ENTR1
EXOC3L1
E2F4
RAB18
RCOR3
RPS2
CCDC107
H3-2
ITGA3
DIAPH1
DRAP1
C11orf68
POGZ
INO80C
RINT1
ANKRD18B
MNAT1
KBTBD6
CCNC
TEX46
KDM1A
IQSEC3
INTS1
CHD1L
PRKAB2
COX16
KCNMA1
TESK1
SRFBP1
SH3GL1
CHAF1A
AVEN
CCND1
CPLX2
ZBTB45
ALG10
MTERF1
SCGB1C2
SCGB1C1
EDC4
ODC1
ZMPSTE24
FZD1
MUS81
CFL1
ZSCAN25
PRKCE
SEC16B
AURKAIP1
COG2
TPR
ODR4
TRIB1
RBM45
PDE11A
ZNF827
TUBB1
TTC4
FAM227B
DTWD1
SLC25A51
RPS8
RACK1
GMEB2
RILP
DPH7
INTS5
UFSP1
ACHE
SERPINA3
RGPD2
RGPD1
PRADC1
CCT7
C10orf88
RPL26
UQCC1
KNL1
CASC3
ANP32E
PFKFB4
UCN2
PRRG2
NOSIP
LRRC37A3
CT45A7
CT45A6
CT45A3
SLC33A1
GOSR1
PSMD6
ATXN2
TRPC4AP
MUC3A
OTUD7B
CSNK1D
NOC3L
METTL15
KIF18A
NOB1
PIP5KL1
HEXIM2
ATP5MF-PTCD1
ATP5MF
MACC1
KMT2D
CDC73
TTC33
POLDIP3
CCDC86
H4C3
H1-6
MRPL38
THAP5
DNAJB9
WWOX
COQ5
SRA1
NFATC2
DUS1L
FAM133B
RRN3
TMEM238
RPL28
MTAP
H1-0
GCAT
DHX8
GTF2I
GRAP2
TIGD1
EIF4E2
CPPED1
ZNF106
SNAP23
SRSF6
ILVBL
ZNF253
BANP
ORMDL3
RUVBL1
ZC3HC1
SLC35A3
CHI3L2
FXYD1
LGI4
MED23
RPL23A
RAB34
BOD1L1
TUT1
PSMB6
NCOA3
PPP4R3B
RFXANK
BORCS8-MEF2B
BORCS8
ZBTB37
RCC1
NSUN4
MTHFS
WWTR1
RPS27
RAB13
ATF6
MRPL58
BICD1
SNTB1
SOX10
TTI2
ANKRD40
DUS2
DDX28
RCC1L
ADAD2
TAF1C
BAGE5
BAGE4
BAGE
BAGE3
ZNF554
MRPS14
ZNF830
CCT6B
BRD2
RPL11
NBPF1
NHEJ1
TMEM40
RPS14
LSM8
H2AX
TP53BP2
ZSCAN22
RPL29
RPS3A
SUPT5H
ITGB3BP
EFCAB7
FRG1
LRRC37B
TRIM60
C7orf61
SNRPE
NMNAT1
LZIC
RPL13
TEX9
RFX7
TNFSF14
USP2
INPP5F
CFAP298-TCP10L
CFAP298
FUS
REX1BD
DDX19B
AARS1
ARID1A
RNF216
PYGB
SPIN2B
EXD2
SNX19
LDAH
AP4E1
SIT1
CCDC88A
RPL7
RDH10
NAA20
HOOK2
TAF13
H2BC8
H2AC8
AK3
GPR176
CFAP20DC
PCOLCE
CALR3
C19orf44
C16orf91
WNK1
TRIM48
TRA2B
CAAP1
PARP4
ZNF708
EMC3
YJU2
SEC13
CHCHD2
MFF
SDHAF3
SLC26A2
RFX3
KCTD3
ABHD12
SRGAP2C
SRGAP2B
TRAF1
MYBPC3
ZC3H10
RPL41
SART1
ZER1
THOC5
EIF4A2
ANAPC5
HNRNPA1L2
NBN
MBTPS2
RAF1
TENT4A
PDE6D
COPS7B
LMNA
TBL1X
PBK
NDRG1
ZCCHC4
OSBPL11
C8orf33
LRRC59
MRPL48
AARS2
HNRNPH1
WBP1
INO80B
FAM189B
MRM3
GLOD4
TRIM46
KRTCAP2
ITPKC
COQ8B
RBM14-RBM4
RBM14
MKRN1
CERS2
ANXA9
TFAP2B
DNLZ
SPDYE14
SPDYE10P
POLR3B
VPS72
LSM5
AVL9
RMDN2
NFE2L2
H3C10
H2BC14
H2AC14
LYPLAL1
NREP
PLEKHG5
PPP1R1B
FAM228B
SF3B6
RPL13A
MRPL39
RPL7A
MED22
WASHC5
NSMCE2
ZNF791
ZNF490
LDHA
SLC36A1
EPHA3
MTR
POLR2J
FANCD2
ERMARD
VPS33A
GLIPR1L1
CAPS2
PCOTH
MIPEP
STEAP1B
TMEM115
SEC61A1
CWC25
VPS45
NDUFAF5
ESF1
MRPL40
HIRA
LAMTOR5
ZNF564
RANBP6
C16orf72
COIL
MARCHF7
CSKMT
C11orf98
RFFL
ZNF443
DEF8
VIM
LTBR
HOXB3
CDCA3
DNM1L
UTP3
POLR2J3
SMG8
CDC16
GTF2IRD2
H2BC12
H2AC12
GTF2IRD2B
MEOX2
ZNF56
ARMH3
REXO4
ADAMTS13
MCOLN1
LIG4
ABHD13
CRB1
APH1B
ZNF45
TOMM20
TAF5
H3C8
H2BC10
VWA1
LTBP1
PKIG
ZBTB40
LONP2
ABCC11
PARP2
YBX3
EML2
MBNL2
LOC100509620
PSMB4
SURF6
TTC26
STMP1
TPK1
DCUN1D5
RBM17
USP4
MAPRE2
PNPO
COL16A1
CDH19
BOD1
LTA4H
FBXO38
BCL3
NACA
TUBA1C
RBM39
RPL5
STK4
BBS1
ELAVL3
KDSR
LRP6
PLPP4
ZNF337
WIZ
ELOB
POLG
CALM2
ZNF76
CEP120
ATAD2B
KDM6B
CHD1
SH3TC2
ZNF205
UNK
TARS2
TAF3
EIF1
ID1
MCL1
FAM78B
TIMMDC1
SAMD10
PRPF6
PSMB3
PCGF2
RPS21
HEMK1
C3orf18
UBXN1
KMT2E
EPB41
DDX5
CEP95
IPP
RASA3
TMCC2
ZNF561
TAGLN2
IL6R
TMEM170A
SRSF5
XKR7
PLA2G4C
MYPN
IDH3B
DCAF8
H4C8
DHX9
FCRLB
FAM187A
COMMD1
CCT4
GRPEL2
CTNNB1
GPATCH4
H2BC11
H2AC11
SACM1L
MLEC
SPRED2
PEX2
COA1
RNF6
RHBDF1
PRNP
RBSN
SNRPD1
LSM12
G6PC3
BUD13
PPP2CB
BORCS5
CAPRIN2
ABCA1
IFT46
ARGLU1
PTPN13
APP
TNFRSF12A
THOC6
HCFC1R1
PTPN6
C12orf57
CBX5
HNRNPA1
WASHC2C
GTPBP3
ANO8
KIAA0895
CLDN6
MAGEA2B
MAGEA2
CCDC90B
GFM2
DNM2
ACOX3
TRMT44
EIF2B3
ATP5F1E
NANOS3
OPN3
CHML
DYNLL1
ERMP1
PDE8A
INTS2
GFOD2
SRSF9
BACE1
FXYD3
ABCA10
MTERF4
SLC35E1
THOC3
DIDO1
GID8
LUC7L3
DISC1
CNP
LTBP3
SLC25A21
MRPS15
TIMM10
BAIAP2
SEC22B
GNPAT
C1orf131
ALDH9A1
DNAJB1
TUBB3
MC1R
SPIDR
TECR
LETMD1
SPRED1
FLRT3
OR2L13
OR2AJ1
TRAPPC3
BMS1
ARL14EP
THEM4
COMMD4
ARMC8
TMEM167B
SRRM1
ABCA3
PKD2L2
ZNF579
SPRY2
AHCY
SOD2
WTAP
EFCAB2
H2BC7
NECAP1
H3C4
H2AC7
GOLGA4
INPPL1
KLHL9
ESD
ISLR2
ABCF2-H2BE1
ABCF2
SH2B1
C18orf25
RPL35
ARPC5L
ZBTB17
MANF
ABHD2
RPL37A
TRMO
PGLS
NAPEPLD
SLTM
HM13
ARCN1
USP28
SNTB2
GRHPR
NDUFA4L2
DUSP4
GEM
PCARE
UBAP1L
PANK4
HES5
PSMD11
TMEM186
PMM2
MTRF1
C2orf42
PIKFYVE
ADAM17
SPATC1
H2BC4
H2AC6
ANKRD13D
NAGPA
SLC25A28
MMAA
LARP1
RGL1
ARPC5
ZNF609
DAB2
NAA16
MAMDC2
FAM207A
UTP25
TSSK6
NDUFA13
H2BC13
H2AC13
MTMR2
FNIP1
BLOC1S2
ABR
CASP7
TIMP1
TMEM41A
MRPS18C
HELQ
SPRYD4
GNAI2
ABCB10
DCLRE1B
AP4B1
B9D1
H4-16
H2AJ
MAGI2
CCDC174
MTMR9
CDC25C
FAM53C
TSN
MRPL1
FBXL18
LRCH4
FBXO24
SEPSECS
DPH6
BTG1
H3C12
H2BC17
H2AC17
APBB2
FGFBP3
MIDEAS
ZP4
LOXL4
ZC3H11A
ZBED6
RPL34
TIGD6
HMGXB3
ARF4
POMP
CIAO2B
CES2
RSL24D1
SLC35A4
APBB3
ATP6V0D1
AGRP
MAPKBP1
SFPQ
RPL30
CTHRC1
GIP
CES4A
BOC
SLMAP
MDM4
SLC30A6
IER5L
STX6
SLC39A6
ELP2
RGS2
SUPT20H
SCRN1
CEMIP
LIFR
HMCN1
KCTD5
MTIF2
ZNF696
EMC4
MKRN3
DELE1
CLASP2
NQO1
ZNF506
SLC6A15