ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
GSTA4
H4C14
H4C15
MTRNR2L2
MSH3
DHFR
PHC2
NUF2
COL23A1
MTRNR2L8
MTRNR2L1
FRA10AC1
EIF2D
DSTYK
DCP1A
S100A2
GBA
TRIP4
TMEM107
RAD54L2
TBC1D19
H1-2
MUC3A
HMGB1
USPL1
CDK5RAP1
STX16
SCAND1
CWC25
DRG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SF3A3
RBBP5
POLDIP3
RPS7
STX18
NDUFS3
KBTBD4
DHX8
H4C11
TRIM48
PLEKHM3
ATP5MC2
TBL3
RNF151
NBPF1
RPL37
SAR1B
TRIAP1
H1-3
RGPD2
RGPD1
SMARCD2
ZNF296
GEMIN7
S100A16
RCAN1
SELENOH
NME1
CTNNB1
CCNL1
ZBTB45
SECISBP2L
SSBP1
CRB1
UTP3
H2BC21
H2AC21
H2AC20
TTC26
MRPS23
SLC24A1
MTF2
GTF2H2
H4C6
BNIP1
H3C15
H3C14
H2AC19
H2AC18
INTS12
GSTCD
MAN2C1
RPS6
WDR36
FAM3C
YWHAE
MLEC
SERPINE2
RPS2
H3C13
H2BC18
ERCC1
DMAP1
LY6K
DPP9
LRRC37A3
GTF2H2C_2
GTF2H2C
SNAP47
JMJD4
AURKAIP1
TATDN3
NSL1
TUT1
PSMF1
SIRT4
PPP6R1
RAB5IF
ATF6
STAT3
RBM15B
LAMP1
TBC1D13
MRPL30
MITD1
H3C3
H2BC3
TARS2
TMEM222
ALG10B
RPS27
RAB13
MYO9B
HAUS8
FOXJ3
C17orf75
YIPF2
TIMM29
POLG
METTL25
CCDC59
RARS1
EFCAB2
HPCAL1
MRPL16
SCNM1
LYSMD1
H2BC5
H1-4
TBL1X
RPL12
LRSAM1
H4C12
PTPN6
C12orf57
PSMD3
NOTCH2
SMG8
KMT2C
RPS20
FAM227B
DTWD1
GTF3C3
TEX46
KDM1A
DDIT4
COMMD9
MRPL21
IGHMBP2
NOC4L
DDX51
JRK
COX5A
KBTBD6
SLC35E2B
TACO1
COMMD2
LARS2
PDCD6
NR1H2
NDUFC2-KCTD14
NDUFC2
U2SURP
STX1A
MDM4
SLC44A1
UBQLN4
LAMTOR2
KRR1
ZNFX1
SDHAF3
MED18
ZER1
TAGLN2
TSSK6
NDUFA13
AGK
GNAI2
RANBP2
ITPKC
COQ8B
NKIRAS1
RPL15
FAM98B
MAPK1IP1L
NOB1
NUP107
USP3
CDK2AP1
TCEA2
DUX4
TTC1
RUVBL1
MTERF4
NCBP3
SSBP2
SAMD4B
SPRY4
NMNAT1
LZIC
RPS28
NDUFA7
ATP5MPL
TAMM41
H3-2
MED23
TSPAN10
NPLOC4
PRKCE
SEC16B
BCAR1
TSC2
NTHL1
SEC13
MTIF2
DPY19L4
CDKN2AIPNL
NDUFA12
KLHL12
CCDC90B
TVP23B
MRPL58
PPRC1
GALK2
COPS2
USP4
WDR24
HEATR1
PMS2
AIMP2
SLC27A5
MRPL1
MKRN2OS
MKRN2
ASB6
SLC25A51
CDC73
KANSL3
FER1L5
MBTPS2
NPAS4
SOAT2
IGFBP6
MRPL19
METTL9
PCID2
CUL4A
INTS1
POLR2J3
DDX1
FRG1
KDM8
PSMD11
ANP32E
PTEN
KLLN
NLE1
SRSF4
KNL1
ACTN1
RPS3
VPS25
ELAVL3
NSFL1C
MRPL53
PDE8A
FXYD3
INTS5
GAPDH
TTPAL
ARL2BP
DCAF10
AAR2
IQCH
AAGAB
BUD13
RINT1
UBOX5
FASTKD5
CCDC88A
ZBTB37
METTL15
KIF18A
VPS33A
SNRPB
H4C4
ZSCAN22
NCOA3
H4C5
RBM39
TRMT61B
TMED2
MAT2A
CLUAP1
C16orf90
PRKCSH
CCDC151
GFM2
PDE4DIP
SLC25A32
DCAF13
NFE2L2
LONP2
ABCC11
ID1
EIF3E
ADPRHL1
SLC25A13
ANGPTL4
PEMT
DPH7
BCL3
DNAJC24
DCDC1
UQCC1
TOR1AIP2
TOR1AIP1
UBL7
DNAJC11
POMP
AP5Z1
BBS1
SLC20A1
STARD4
MICALL1
CDCA3
CATSPERG
H3C8
H2BC10
YWHAZ
FBXO46
MEIOSIN
SSNA1
ANAPC2
TTC4
YARS1
S100PBP
VTA1
NMBR
H4C9
SNAPC5
AP3B1
ALDH7A1
FBXW2
CALM2
H2BC8
H2AC8
RMDN2
ASB2
PARP2
PHLDA1
ST3GAL2
NUP153
ELAVL2
SNRPB2
CCDC15
WASHC2A
MRPL38
ADNP
ARID2
DDX59
SULT6B1
RPL27
SLC35E1
H4C3
H1-6
CHD1L
PRKAB2
LZTR1
ZNF3
LRRC46
WDR31
H2BC11
H2AC11
PANK4
HES5
PEX14
DFFA
CIAO3
PPIP5K2
USP30
H4C2
H3C2
SACM1L
OGT
ALDOA
GOT2
SPRY2
PA2G4
PPP6C
ZC3HC1
HEXIM1
RHOT2
AP1G1
GARS1
H4C8
ZBTB40
VPS4A
LRATD2
PSPC1
ZNF721
PIGG
H2AC4
TPT1
LIMA1
COL16A1
TMEM101
SNRPE
TSNAX
ZMPSTE24
SAMD10
PRPF6
ELK4
TCHP
H3C12
H2BC17
H2AC17
UBA2
NUP188
DOLK
CCDC125
MRPL24
KIF15
KIAA1143
TEFM
DRAP1
C11orf68
PSMD9
HPD
GORAB
NAGK
EPHA3
CCAR2
C8orf58
MRPL40
HIRA
NECAP2
ECSIT
DISC1
EEF2K
WWTR1
AGMO
BANP
CCDC174
AP2B1
ZC3H10
RPL41
TRPC4AP
HDGF
ZSCAN25
SRRT
RAD23A
ZNF770
PLEKHB1
PPID
ZCCHC4
PARK7
ARL14EP
LSM12
G6PC3
CDK12
COG2
WIZ
NRF1
TSR3
GNPTG
EPRS1
SLC9A1
SMG7
C1orf53
PRRG2
NOSIP
SH2B1
TUFM
TTI2
MRPS31
TOP3B
GOSR1
VPS72
POLR3E
B3GAT3
ZNF594
MRPS24
DHRS3
TRIM62
USP48
UCHL5
RO60
ATP5MF-PTCD1
ATP5MF
COMMD1
ANXA2R
STYXL1
MDH2
AMOTL1
PDE6A
GID4
ATPAF2
SART1
WDR70
ATR
MRPS14
NME6
RRP9
PARP3
EIF3H
RPL10
SYMPK
FOXA3
TMEM127
CIAO1
CCDC200
SLC39A13
MTMR2
CSRNP1
CHMP4B
ZNF212
IPO4
POR
CREBL2
SYT5
STAT1
TOB1
TNFSF14
ZNF106
SNAP23
PAFAH2
DDX23
FBXO38
TMEM79
SMG5
RPTOR
CSDE1
NOC3L
TRIM16L
LENG8
H3C10
KEAP1
CSNK1G3
DMTF1
H2BC14
H2AC14
COQ5
VPS37B
AXL
OTOA
NDUFS7
LDAH
DDX46
PDE12
ERLEC1
ASB3
MUL1
DR1
RASA3
RHBDF1
ZP4
KLHL20
GPS2
TRMO
RNF168
PRDX1
ILF2
EXOSC8
ALG5
TUBB1
PRCC
WBP1
INO80B
NFKB2
MRPS15
ZNF148
RUSF1
ISG20
COPS6
TTC32
R3HDM2
INHBC
CASC3
PRDM5
CT45A7
CT45A6
CT45A9
CT45A8
CT45A5
CT45A2
ING4
RBM28
TRMT6
MCM8
BRMS1
B4GAT1
MCRS1
S100A13
CHTOP
BCAT2
ZNF697
NFIB
SCRIB
PIGU
TIMM22
RAD52
USE1
DNAJB12
CLUH
COQ9
CIAPIN1
WASHC2C
TRMT1
NACC1
RFC2
SLC26A2
SRSF7
TAS1R1
NOL9
VPS28
H2BC4
H2AC6
IFNAR1
HTR5A
LRRC29
RPL29
TMEM199
POLDIP2
PCBP2
ARL8B
CNOT2
LRRC59
ATXN2L
EEF1A1
H2BC13
H2AC13
NANOS3
PGLS
SLC12A2
BFSP1
BCAS4
FRMD8
SLC25A45
KRT8
KRT18
LRRC52
TMPRSS5
SLX1B
SLX1A
BOLA2B
BOLA2
SNRPD1
AAAS
PRR19
PAFAH1B3
TESK1
AMACR
FGFBP3
FOSL1
TMC1
SNX17
EIF2B4
TOMM22
MIA3
LRWD1
ALKBH4
TOMM7
TRIM46
KRTCAP2
SPRED2
HSPA8
STT3B
TFB1M
PYGB
MOB3C
MPHOSPH10
MCEE
SCO1
ADPRM
ARHGEF12
LOC112694756
ZNF185
FAF1
SMIM14
RIN1
CALR3
C19orf44
IPPK
KCTD5
SASS6
CCDC124
BMS1
ARHGEF7
ARID3B
HSPA9
FOXO3B
TMEM223
TMEM179B
ARTN
TP53I3
LOC100509620
UNK
RPS6KB2
LMNA
STOML2
MFAP3
FAM114A2
ZSCAN30
RPL7A
MED22
TAF1B
C16orf72
MSANTD2
OCEL1
UQCRC1
ADORA2B
ABCC3
PGAP4
FAM168A
SEC14L1
SCAP
ALG14
ATP6V0D1
AGRP
H2BC7
MRPL4
ANKRD13D
TRNAU1AP
H3C4
H2AC7
RPL7
RDH10
MEMO1
NT5C
ZNF350
WASHC4
ZNF668
ZNF646
SMIM12
NDUFAB1
ZNF398
ZNF425
DCAF8
TDG
MRPS21
TPK1
C11orf49
TUT7
USP1
FURIN
FAM228B
SF3B6
PMF1-BGLAP
PMF1
NOL11
DYM
ADAR
SOS1
NUP133
MAZ
MNAT1
LRRC49
THAP10
GRB7
IFRD2
STAU1
SPATC1L
TOB2
PSMD6
INAVA
PUM2
DDX27
LDHA
MAD1L1
DYNLRB2
CAMKK1
EIF3L
ANKRD54
HIF1AN
GPAM
WASHC5
NSMCE2
TMEM126A
NUCKS1
PDS5A
RFFL
SH3TC1
DPY30
SPRYD4
THOC5
TIGD6
HMGXB3
MRPL39
TMEM250
MAP2K3
RICTOR
COX7C
C19orf67
LUC7L
HIRIP3
COPS4
PURB
ZNF696
STIP1
CSTF1
AURKA
NXF1
QTRT1
AVPI1
KXD1
ADGRG1
TMEM62
SH3TC2
CASZ1
GTF2H4
SMN2
SMN1
YJU2
C1orf54
APH1A
SYTL2
CATSPERE
PADI3
TSSC4
PNPLA6
EIF3C
EIF3CL
TEKT2
ADPRS
MRPL11
TSFM
POLR3D
RPL32
HIPK1
CYB561
AATF
DBR1
PLK2
RFX1
NR1H3
ACP2
CEP350
FAM187A
EFTUD2
CCDC103
CGGBP1
MCOLN1
G3BP1
RPL5
C3orf38
ICE2
FAM200B
MED12L
C19orf53
GINS3
SPNS1
COX7A2
GNB2
RPL30
MAML3
DCPS
INA
RPS13
GGPS1
ARID4B
BABAM1
ZC3H6
DNLZ
RPL38
CYCS
CCDC86
KLHDC10
MGST3
TXNDC15
ATAD3A
RAD9A
ATF3
ADK
SPRED1
AGL
NUP214
THEM4
THUMPD3
C11orf65
ZNF846
DSN1
OR2L13
OR2AJ1
PEX12
PSMB4
DDX18
RANBP6
HINT3
SCAF11
FCRLA
C1QTNF3
PNKD
AAMP
KPTN
UBR4
PKIG
KMT2D
SNF8
LSM5
AVL9
EXOSC6
SLC35B1
TPM3
TMEM168
BTBD1
RPL21
JUNB
UTP6
RBM12
CPNE1
SRRM1
ATRN
FBXO27
GET4
SRFBP1
RCOR3
DHPS
CCDC107
ZNF518A
CEP78
ALDH1A3
KCNMA1
CLTC
TRMT10C
PFDN4
FBXW9
FAF2
H2BU1
H2AW
MINDY2
BRD2
SF3B2
GAL3ST3
GAPVD1
TEX261
GPATCH4
METTL2A
H2AX
ATAD2B
NUDT15
ITGA3
TRIP6
NUDCD1
TRAF7
SERBP1
NOL7
TFRC
PIGL
NCOR1
RAF1
CLPTM1
H4C1
BIN3
POLD3
H3C1
H1-1
C8orf37
LSM11
SRCAP
LOC730183
TRIB1
GATAD2A
CHD2
ZNF410
TM2D3
DDX50
BRIX1
METAP2
ACBD6
PGAM5
SLC35B4
UBA52
ILF3
RPL22
ABT1
CUEDC2
PPP1R15B
RCHY1
MRPL27
EME1
DNAJC25-GNG10
DNAJC25
EEA1
TMEM259
RPLP0