ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

NLRP12
WDFY3
GATA4
SPATC1
LAMP1
CDCA3
NFKB2
SEMA4B
MEF2C
WDR74
PLSCR1
XRCC5
OR10J1
FRG2C
ABT1
GNG2
KLF2
PPIAL4H
PPIAL4G
GSTA4
MTRNR2L1
CMPK2
FEM1A
TLR4
IL1B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC18A2
CALR3
C19orf44
A2M
PGK1
ITGB2
ADAM28
GPBAR1
SMPD3
RPS19
SPDYE13
STEAP4
IL7R
UBXN8
PDLIM2
PTK2
NUDCD1
BOD1
SLC12A6
NOP10
NUTM1
CXCL1
APOL6
NIBAN3
RNF149
H4C11
CCL26
IFRD2
ZNF221
H4C12
DNAJC5B
NEDD9
DMWD
GLRX
CD1A
PPIAL4F
PPIAL4E
PPIAL4D
DOCK8
CD1C
FRG2
ZNF718
ZNF595
SUN1
PEX12
CBX1
SNX11
COL8A2
DCAF12
GBA
NR3C1
DUX4
CLEC4G
TMEM104
NAT9
H4C3
H1-6
CES1
TMEM91
B9D2
DDX58
TMTC3
CEP290
NBN
KBTBD6
ASGR2
SCNM1
LYSMD1
PPP1R12C
GHRL
CTU1
EXT1
MTMR9
NUDT4B
NUDT4
RPS20
BCL3
H2BU1
H2AW
INTS9
HMBOX1
CYTH4
MS4A3
CLPB
ZNF780A
ZFYVE1
ZNF444
SH3BP2
TMEM115
FBXW4
VCPIP1
C8orf44-SGK3
MINDY3
ZSCAN30
DYNC2H1
TASL
BID
NPY4R
NPY4R2
SIGLEC6
MRPL24
SIGLEC9
TRIM41
EXD1
CHP1
NDUFS7
GPAA1
EXOSC4
CEBPD
TSNAXIP1
RANBP10
MICOS13
HSD11B1L
CD33
NUF2
SPRED2
PANK4
HES5
PEX3
ADAT2
LTB4R
LTB4R2
CIDEB
RUBCNL
H4C14
H4C15
SUCNR1
ST3GAL2
NBEAL2
RAB4B
MIA
EDDM13
NABP1
SLC23A2
SLC1A5
HPSE2
H4C9
IPCEF1
KBTBD7
MRPL30
MITD1
MMACHC
MEFV
CCR5
PAFAH2
BTRC
TRPV4
TPRKB
PROS1
ZNF225
RFX1
CHMP4B
PNKD
AAMP
BRF2
TP53I11
MTF2
PPRC1
MRPS18C
HELQ
PLEKHM3
RAB24
PRELID1
C19orf84
DHRS7B
DDX18
DENND3
CCDC152
TYROBP
TMEM243
TLE6
GSPT1
TRIP4
BAZ1A
RMND1
ARMT1
CCDC200
RAB39A
TOR1AIP2
TOR1AIP1
H3C13
H2BC18
ZNF226
FIGNL2
GNA11
FOLR2
P2RY14
TM6SF1
AP2S1
ALOX5AP
KRR1
INVS
ERP44
CCAR2
C8orf58
CARD8
RMDN2
ARHGAP25
PHB
EHD1
AP1B1
RAC2
ADGRG5
NDFIP2
MED23
KANSL3
FER1L5
COPS7A
BANK1
LRRC37A
IL1RN
CSF1R
NCF2
DISC1
YES1
PEMT
ZNF227
TMEM107
FRG1
CTTN
LMO2
ENOSF1
PPP1R18
TAF1B
ARID5A
CCER2
STAP1
MTRNR2L6
TBL2
ICAM1
POMP
GRPEL2
PPP2R2B
EIF4G3
FCGRT
CCDC146
CLEC10A
NME7
BLZF1
ATP1B2
PPIAL4C
PPIAL4A
INSC
TAL1
JOSD2
ASPDH
INPP5D
CAMKK1
SIGLEC1
PRCC
ZSCAN22
IGF1
DCP1A
ZCCHC4
CD82
DNAJC10
ANKRD63
ADGRE1
ANKRD18B
UTP3
FAM227B
DTWD1
ITGA4
PGBD4
EMC7
FLOT1
IER3
RIPK1
INTS12
GSTCD
HMOX1
PRRG2
NOSIP
LRRC37A3
AURKAIP1
NOTCH1
AHCYL2
WASHC4
MMP9
SORBS3
TBC1D19
RYK
RPS7
FBXO46
MEIOSIN
PRKCE
GPR68
VPS26A
LILRA2
RUNX1
VAV1
ASPHD2
SMC6
GEN1
PARP10
GRINA
S100A8
FRA10AC1
GATB
TEFM
MTIF2
SHISA5
TTC33
GALK2
COPS2
ARPC3
IPPK
GABPB2
PHC2
ERLIN2
OBI1
CTSG
RFFL
RAB27B
CA13
PPP6R1
USP3
TMEM154
FGGY
OLFML2B
CAPG
MARCO
RASSF5
RPL6
NFE2
UBR1
SSBP1
DPY19L4
LYSMD2
SYMPK
FOXA3
PRR5
PEAK3
SF3A3
TEAD3
CCDC149
TRNP1
SSBP2
DR1
PPP1R12B
TBPL1
BORCS7
RPL5
MPEG1
FASTKD1
LCE3A
TMEM68
TGS1
TNNI2
TSSC4
VPS13B
PHF12
DDX1
ACTRT3
H3C3
H2BC3
RPS6KA1
DHRS4L2
SLC39A1
CRTC2
DHX8
PIK3CG
BSG
ZAR1L
BRCA2
MAP1S
RBBP5
ZC3HAV1
KCNK6
GTF2H2C_2
GTF2H2C
MRPL42
RNPEP
ADGB
H1-3
SLC25A10
SCRIB
RPGRIP1L
FTO
PPP1R11
NDUFB7
CEACAM21
NCALD
VOPP1
SPATA24
SYNE3
BNC2
SLC35B4
ZNF268
CSF2RB
XCR1
NSMAF
ANXA2R
ZFP64
JAK3
RPIA
CARD19
IRF9
ARHGEF18
FAM133B
BCL2L13
FAM228B
SF3B6
EPN1
TRIM31
TRIM35
PTK2B
HSH2D
BCAN
TACC1
OR1D5
GTF2H3
EIF2B1
FAM167A
RPH3AL
TMEM11
MRPL48
PCBP2
ZNF224
LSG1
DPY19L3
LCMT2
ADAL
PPIP5K2
ZNF554
SECISBP2L
FASLG
TCTEX1D1
ZBTB45
CCR1
SEC14L1
PLCXD2
INO80D
NDUFS2
ADAMTS4
ALG10
MRPL1
TTC14
CCDC88A
NINJ2
DSTYK
ZNF350
CDK5RAP2
SLC24A1
RALB
TULP2
NUCB1
PDE4B
CAVIN2
CHCHD5
FCAMR
NDFIP1
ZNF56
CCDC90B
SLC1A4
ZNF175
APPL2
FUT10
SDSL
HCK
TMEM212
SCGB1C2
SCGB1C1
PPM1M
ACTA2
TMEM242
POLR2J3
ZC3HC1
USF1
TMEM229B
PARP2
PPP1R15A
PLEKHA4
GFUS
JRK
SLC39A13
IDH3B
ADAR
SCAMP2
SIRT2
NFKBIB
PSMF1
H4C4
PEX2
H2BC6
STING1
SNX17
EIF2B4
SLC9A1
TACO1
SELPLG
OLFML3
TFPT
PRPF31
MRPS23
CPEB3
MARCHF5
ARHGEF3
STX7
CCDC9
SAMD4B
GMFG
SMG6
MFSD10
CAPN2
TIFAB
CD93
ZNF235
VSIR
PSMA8
PDE4A
PCM1
TTI2
COMMD2
CHMP7
GNB4
RGS12
TMEM222
HUS1
TEX46
KDM1A
H2BC5
H1-4
MIER2
TSC1
GFI1B
ASF1B
AQR
LARS1
EMILIN1
UBR2
BRWD1
PIGV
ZNF518A
SLC37A2
NME1
RPL37
UBE4A
ANKRD40
INKA2
DDX20
PRKD2
MAML2
ZNF286A
RIC8B
EIF2D
SUPT7L
SLC4A1AP
STON2
SIRT4
PPP5D1
CALM3
PSMD9
HPD
LMBR1
BCL2A1
ACRBP
GTF2H2
NFX1
ACTR3
MCUB
KDM6B
PLEKHG3
CCNL1
HMGB1
USPL1
RBCK1
ZNF846
TCEA2
KLHL20
ARHGDIB
FOXP1
ZBED4
MPG
RHBDF1
ORC2
MPRIP
RASSF2
RAB3IL1
GAS6
SCAF1
RRAS
SCAMP4
ADAT3
OAZ3
INO80C
MORF4L2
H1-2
TATDN1
NDUFB9
ISG20
POLE4
HERC6
LRRC25
ZC3H6
RRS1
ADHFE1
CTNNB1
TRDMT1
H4C8
HIBCH
SLC22A18
SAR1B
SPOP
SIRT6
ANKRD24
KDM3A
TRIP12
FBXO36
LRRC8D
N4BP2L2
MED4
LGALS12
INTS10
TEX44
TNFAIP1
IFT20
USP15
SLC44A1
POLDIP3
ARID3B
GOSR1
PRIM2
PPP3CC
SERPINE1
PRKCD
ALG10B
UXS1
SHKBP1
ITPRIP
MALT1
C1orf159
MKRN3
BOLA1
ZNF148
RNASE1
ING4
MRPS31
GFOD2
TRIM69
TMEM41A
SLC45A4
MOB4
EMC4
RXFP1
CWC25
PES1
NUFIP2
TCN2
CCND3
SETDB1
DCAF10
H4C7
H3C7
H2BC9
SLC35E2A
PSMC1
MARCHF6
DDX23
FBXW11
ESCO2
CCDC25
FBXO28
BNIP1
ROPN1L
PLEK
SQOR
ANKRD22
VPS50
HEPACAM2
PPIL2
FCRL4
TVP23B
PSMA1
DRAP1
C11orf68
EFHB
TMBIM4
SLC22A16
TIGD6
HMGXB3
MYL12B
DUSP7
CCNC
MBNL1
DSCC1
ASH2L
SRGAP2C
SRGAP2B
RPL27
MRPL27
EME1
MYBPH
TPR
ODR4
AOAH
RXFP4
AGTRAP
CAMP
GTF2H4
THAP1
ARMH3
H4C5
DENND4B
CNPY3
H2BC7
H3C4
H2AC7
SAT1
PRAM1
COX7C
ZMPSTE24
TATDN3
NSL1
TXNDC15
ALDOA
TUBA8
ZNF420
NUDT13
ZNF212
UBLCP1
MYO1A
MICAL2
RNASE10
APOL4
CCDC124
COPS4
ZNF331
PTPN6
C12orf57
ZNF180
COX7A2
POLR2M
METTL3
MRPL34
DDA1
FNTA
ZNF76
CYP4V2
ABHD8
ZNF574
SPIDR
TFEC
EMP3
CDK5RAP1
TSSK6
NDUFA13
ARL8B
CCDC114
TSG101
MLNR
TSPAN16
ORMDL3
DRG2
CBLL1
RNF166
PTGS2
CALHM6
GSK3A
USE1
RPS15
LSM8
H4C1
H3C1
H1-1
BAZ2B
MORC1
BMS1
PRPF18
MICU2
BANP
ARHGEF1
UTP23
GNAI2
H4C2
H3C2
H2AC4
HDDC2
MCTP1
S100B
SIGLEC7
SHISA7
METTL25
CCDC59
EXOC3L1
E2F4
WASHC5
NSMCE2
XAF1
TFEB
DOHH
VTA1
NMBR
OPA1
N6AMT1
RABGGTA
SASS6
NOTCH2
LUC7L2
TRIB1
POLR3B
FMC1-LUC7L2
FMC1
TAGAP
C1QA
FBXO39
TESPA1
RBM45
PDE11A
METTL6
EAF1
C10orf95
NFKBIA
RAB11FIP1
SAMD14
ARHGAP9
MARS1
BRIX1
PCNP
CBFA2T3
RASA1
RAB3GAP1
ZNF749
C18orf21
NUDT7
RPL29
SUGT1
MAGOHB
CDIPT
ETV6
KMT2B
PRKCI
MRPS15
TCF3
CNTRL
UNC45A
HDDC3
H4C6
TEX36
LYNX1-SLURP2
LYNX1
MAPK1IP1L
ATP13A2
ZKSCAN4
COX18
SIGLECL1
SH3TC1
FCER2
PEX26
ZNF557
PUM2
WNT2B
KCNK9
MRPL3
TEKT2
ADPRS
VIRMA
NEK4
OR52W1
C11orf42
TTC13
ARV1
ZCWPW2
AZI2
H3C8
H2BC10
TLR1
TRIM71
MRPL16
TOP3B
MRPS10
ERCC1
STX1A
PTAFR
PSMC6
TMEM121B
MRPL44
ZNF410
DGAT1
TMCO1
RPL23
PDCD6IP
TRIM8
C19orf53
YIPF2
TIMM29
TTC26
HARS2
HARS1
R3HCC1
COMMD4
P2RY6
SERPINB13
KRT36
WDR70
SGF29
THEM4
C1orf162
IL12B
TIMM21
FBXO15
SLC7A11
NDUFS3
KBTBD4
NUP54
CLN3
APOBR
SDHAF2
CPSF7
MX1
POLI
SLC35F6
LTN1
DGKZ
RUFY3
NCF4
PTPN12
FBP1
PRKCSH
CCDC151
POLR2J2
MAP2K1
UBE2F
EMB
BACE1
ZSCAN31
VRK2
AVIL
TMEM70
ELOC
NSFL1C
POLE3
C9orf43
TMEM65
TBC1D13
EIF2B3
C8orf37
PSENEN
LIN37
DNAJB12
RPL31
BECN1
KMT2E
SFSWAP
HEATR5A
F2RL3
STAB1
CCNI
UFSP2
C4orf47
RPL17-C18orf32
RPL17
CCDC107
C18orf32
HBEGF
SULT1B1
PLD1
ODF3L2
MDM4
LY9
SMIM33
IFI6
FAM160A1
GDAP1
PDSS1
SLFN12L
UHRF1
NKAPL
ARRDC5
TNFRSF10A
STX3
SMC1B