ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX203391 | Plasma Cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◣ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

MLLT1
UTP25
RRP15
CDIP1
LSM12
G6PC3
RRP1B
HSF2BP
METTL1
EEF1AKMT3
CYP27B1
DDX42
CCDC47
EXOSC5
BCKDHA
NME1
ZCCHC7
TRIM59
ANKRD23
UBE2Q1
NPM1
THAP5
DNAJB9
SCFD2
SUPV3L1
UTP11
RAB4A
UTP20
ATL3
KLF16
PWP1
TWNK
MRPL43
MEX3D
DNLZ
PMVK
COA7
RRP12
THOP1
SGTA
HDAC2
XKR9
LACTB2
USP2
INO80
PMS2
AIMP2
KDM4A
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
NCL
AP3D1
RPSA
HBP1
NSUN5
RPUSD4
FAM118B
GPR180
IRF5
PSME3
SECISBP2
COPS7A
QTRT1
PPAN-P2RY11
PPAN
ANGPTL6
SPRYD4
MRPL3
PINX1
METAP1D
UBA52
TBCB
POLR2I
OVOL3
SLC49A4
HSPBAP1
WDR4
SLC19A1
PAK1IP1
C6orf52
HPSE2
GOLIM4
SNRPE
KDM3A
C10orf88
GET4
TBL1X
UTS2R
EIF3B
NCBP2AS2
NCBP2
LARP1
ARFGAP3
RRS1
ADHFE1
PES1
GPATCH4
SHC1
CKS1B
CTSF
TTC27
CLK2
NLE1
TSN
YDJC
CCDC116
CCT2
PBRM1
GNL3
CCDC86
LONP1
CATSPERD
CYFIP2
SLC25A26
ZFYVE27
AIP
SFT2D2
QTRT2
CCDC191
RBM28
PLD6
TMA16
DUS3L
EIF2B3
NOM1
PNPO
URB1
ODC1
RTN4RL1
DPH1
THNSL1
DERL3
ZFR
PNO1
MEF2D
SUGP2
ARMC6
TRUB2
COQ4
EPOP
OSER1
ADNP
RIOK2
MATR3
TMEM248
TMED1
ARSG
FOXO3
KCNN3
VMP1
PTRH2
RHBDD1
PALD1
ELAVL3
MEIG1
DCLRE1C
CENPF
GOLGA8A
SERPINF1
EIF4G1
WIPI1
CLN6
UBAP2L
C1orf43
TMEM268
ZMAT1
NOP16
HIGD2A
ZNF280D
PCP2
STXBP2
DHDDS
LAMP1
TBC1D15
SEH1L
RNF145
KAT5
GNB4
TAF4B
GABPB1
HEATR1
CYTH1
SNX5
MGME1
PPAT
PAICS
RPA2
NAT10
N6AMT1
AKAP10
IQCG
RPL35A
RFC1
NOC3L
MRPL24
DBP
ZBTB7B
MET
ELOVL3
URB2
TAF5L
CD320
PPA1
TOP1
MCOLN1
PRKAR1B
ZNF131
FOXRED2
CRY2
IARS1
TEF
MYBBP1A
GGT6
SEPTIN9
CCDC107
PPID
MDN1
DISC1
RNF32
TRMT1
NACC1
HMGA1
SIRT1
ZCWPW1
MEPCE
ZNF473
VRK3
CYP2R1
CBR1
NKIRAS1
NR1D2
ABCA1
ATRAID
SLC5A6
CAD
SPOP
RPAIN
NUP88
PDE12
MTHFD2
UBFD1
EARS2
PER2
ZNF202
FOXK1
PLEK
CASP8
SMIM12
STK25
CDC16
C6orf62
MRTO4
EMC1
MED26
TBRG4
FBXO32
RANBP2
SLC12A9
WDR26
EPB41L4B
PHB
ANAPC10
ABCE1
WASHC2A
TXNIP
MFF
C1QBP
B3GALT4
VPS52
RPS18
WDR74
SMIM11B
SMIM11A
SURF6
ARHGAP35
FBXL20
TFB2M
CNST
AK2
THOC5
RGS16
MSL2
TCOF1
DDX21
CBX5
HNRNPA1
FDX2
DNAJC11
NOL7
MXD3
RNMT
FAM210A
EPB41
TASOR2
TIMM44
TMEM139
CASP2
UBE2V2
ZZZ3
ZBTB49
LYAR
BRWD1
KPNA4
EIF4A1
TBC1D17
AKT1S1
PNPT1
RANBP3
BCL2L11
UBE2G1
RPP40
RRP9
PARP3
SLC39A11
DIAPH1
JMY
LTBP4
PEX14
DFFA
SMYD5
SELENOH
LY9
CRYBB1
UNG
ALKBH2
RPL10A
YPEL1
RPL23A
RAB34
NDUFAF5
ESF1
ST6GAL1
PCCB
BCAS3
HES1
ZNF280C
YIPF3
POLR1C
NADK2
GALK2
RAD9A
YARS1
S100PBP
ACSS1
CLDN14
PTBP1
TRMT6
MCM8
PGBD5
CERK
PUM3
UBIAD1
TASOR
MRPL55
C12orf66
ZNF292
KCNAB2
ASPSCR1
SLC25A10
SENP2
B3GAT3
NOP14
GRK4
DUSP23
RAD50
KRTAP5-11
NUP35
SDAD1
MED20
BYSL
RPL31
PAXBP1
UBAP2
RIOX2
AKR1A1
CD164
CNOT4
ALG8
ZNF124
MMP23B
CCDC126
DYM
NEPRO
ATIC
UBE2S
NOP2
KLHL18
KIF9
PDE4A
REPIN1
CMSS1
WASHC2C
KIF2A
FAM174B
NOL6
C2CD2L
DPAGT1
DGAT2
NT5DC3
ANKMY1
DUSP28
RPL22
TFRC
MARCHF9
CDK4
PIGW
MYO19
SSBP1
RPL9
LIAS
TRAPPC6A
BLOC1S3
SMARCA4
MSTO1
CEBPB
MFSD3
GPT
RPF2
DHX9
DDX3X
RNPS1
POLR1B
RABGEF1
AATF
VEPH1
MRM1
TTC26
FAM222A
TMCO4
RPL38
C12orf45
SRP19
HLTF
RSF1
AAMDC
RRP1
EEA1
TNFAIP8L1
EIF5A2
NOLC1
PRPF3
TFAP4
KHSRP
LIG3
DUSP2
EZH1
PHB2
GBA
UBE2G2
FLAD1
MCM7
AP4M1
CCND2
DIMT1
NOL8
CENPP
LEMD3
GAR1
PBX3
SON
GART
FAM207A
MRPS28
NACA
CENPS-CORT
CENPS
ZNF3
TMEM161A
RPIA
TXLNA
EVI2A
MRPL27
EME1
DOHH
WDR81
SLC35A4
APBB3
ABCF3
HDHD5
CDK5RAP3
EIF4H
HBQ1
HBA1
EPB41L5
ZC3H8
EVI5
PPFIBP2
PRDX4
PIGM
SMC3
HERC5
PEMT
EXOSC2
PER1
UBE2B
CDKL3
TRPM7
DYRK1A
PIP5K1A
PRELID3A
PHYHIP
INSR
PDHB
DHX40
GDI2
VMAC
NDUFA11
SOX12
ZNF438
PTMA
TAF12
ZNF785
VARS1
MRPS35
TP53I13
EIF3D
PHF20
NFX1
SLC3A2
GIMAP2
MAP2K2
MBD3
PFAS
CTC1
PPIF
RPL5
NME2
PPRC1
SRSF6
CADPS2
ACTRT3
MYNN
ABCF1
RSL1D1
C16orf91
SOCS5
SYNRG
TMEM183A
GGACT
KIF20A
BRD8
LRP2BP
ANKRD37
SETD6
SNRPD1
POGLUT1
TAGLN2
EBNA1BP2
CFAP57
RAD23A
TMEM186
PMM2
POLR3D
ANAPC1
TPRA1
TMEM185B
NABP1
SERF2
ACOT7
REX1BD
SRD5A1
NSUN2
GCLC
ARHGEF3
PAAF1
COA4
ZNF692
RPL39L
FAM76A
DNA2
NT5M
EEF1AKNMT
GNL2
RASA4B
PSMB3
PCGF2
MAPK8
MFAP3L
UCHL1
ARF4
USP14
C6orf89
PPIL1
VPS50
HEPACAM2
SLC33A1
WDR46
PFDN6
REXO2
HSP90AB1
EIF3E
MARCHF8
ATP5F1A
POU2F1
DMAC1
NR1D1
TNFRSF10A
NASP
RPS19
SEC14L1
AEN
TEX15
SERP1
EIF2A
ATP6V0B
DPH2
TK2
CKLF-CMTM1
CKLF
KLF9
RPL7L1
NLRP1
LARS1
ADCK5
TRMO
PARL
ATP6V0D1
AGRP
SMIM20
MAN1B1
DHX35
KCNQ5
HSPA9
NOP56
COQ8A
FANCF
RNF151
LARS2
CREBRF
RPS2
UMODL1
CXCR5
MRPS33
NRAS
FAM78B
SRSF7
ATP9B
NDUFS1
EEF1B2
COX10
PACRGL
MAGOHB
NME6
IPO7
URI1
RPL24
MCRS1
MGA
ARHGAP32
ZNF142
BCS1L
EIF4EBP3
TSR1
SGSM2
CIRBP
NOB1
YPEL5
ATP5MC1
PWP2
LOC102724159
POLI
TIGD2
CCDC6
IPO4
YJU2
PDPR
ZPBP2
IKZF3
NOL10
SMARCA2
PRR19
PAFAH1B3
PCID2
CUL4A
TMEM97
DDX56
ECHDC1
SLC41A2
TET3
IL9
DYRK3
RPL17-C18orf32
RPL17
C18orf32
GLS
AKAP11
RNF44
C12orf29
PGRMC2
LRRC34
XRN2
TOMM70
LNP1
SCAMP3
TIAL1
GUSB
MRPS18C
HELQ
EEF2
TRMT61A
U2AF2
MTR
PISD
TRIM8
SNX15
SF3B3
COG4
VPS29
RAD9B
NARS2
TIMM22
ARHGAP45
ANP32B
CAND1
MRPL15
CXCR3
FKBP11
TOR1A
BRI3BP
DHX37
MRPL1
HPS5
GTF2H1
NOP58
FAM3C
RBM19
ZNF771
GUCY1B1
RCCD1
GALNT14
BAX
CCDC61
RABGGTB
AURKB
CNPY3
MRPS25
MRPS21
UTP4
DERPC
CHTF8
TMEM192
PAFAH2
DNAJC1
HSPE1-MOB4
HSPE1
HSPD1
INTS7
DTL
RPA3
PIK3IP1
PRKD2
KMT2D
RNASEH1
NIFK
EIF4B
ABCF2-H2BE1
ABCF2
TMEM109
SPESP1
PCBP1
MRPS17
WDR17
KCNC3
KLF11
PPP1R10
MRPS18B
PARD3B
SETD4
RCL1
UBALD1
ZBTB37
TXNL4A
RBFA
MXI1
ATP5MC2
SYCE2
KIF27
LSM6
USO1
KLF4
CCDC124
CRNKL1
CFAP61
UPF2
PRCP
DDIAS
SH2D2A
NTRK1
POLR3H
PSMD9
HPD
TTLL12
ING5
RHOG
PNPLA7
MRPL41
SFXN4
NUP153
RPL37A
KLHL32
NDUFAF4
MPDU1
LOC100996842
CD68
POLE4
SERBP1
ABRAXAS1
MRPL42
EEF1E1
ACAD9
HNRNPU
ZBTB10
UFC1
UBQLN4
LAMTOR2
RPL27
PPP1R13L
POLR1G
PIK3R3
RIOK1
CAGE1
STMN1
PPFIA4
SMG1
ANXA2R
PRMT3
CLN3
APOBR
SCAP
H3-3A
POGK
AARSD1
SRM
SLC35F2
NFKBIL1
ATP6V1G2
PLD3
C19orf47
DDX39B
SNAPC2
RNF227
CTXN1
ERLIN1
PTP4A2
TIMM13
CNNM2
B4GALT3
PET117
KAT14
MRPL17
GEMIN4
GOLT1A
TSACC
CCT3
IL4I1
NUP62
ATF5
FAM111A
WBP2NL
CTU1
NUP155
STX4
KLF1
DNASE2
VPS8
FRAT2
CCDC115
IMP4
USP36
TBCEL-TECTA
TBCEL
IFRD2
DIDO1
GID8
CLCN7
SH3BGR
LCA5L
UNC93B1
ALDH3B1
RYBP
WDR43
MRPL35
IMMT
DHX36
TXNRD1
OSGEP
APEX1
NOS1AP
STAT1
ABCC4
RFC4
ERCC6
HK2
CTPS1
MEST
TOMM20
AGPS
DYRK1B
NUP205
TMEM79
SMG5
SNRPA
C19orf54
MFSD4B
ULK3
TELO2
PTX4
RASGRP3
MRPL45
CCNB1
CEP131
TDRKH
CMTR2
SLFN13
RRP7A
RPS16
C10orf143
USP37
CNOT9
PTGES3
FASN
GTF3C4
DDX31
WDR36
SH3GL1
CHAF1A
DHX34
TNFRSF21
HKDC1
MIEF1
TOMM34
TSGA10
IFT140
CRAMP1
GPR176
DLD
HAP1
MDM4
HLCS
GFM1
ZNF565
ZNF146
ADORA2A
GRWD1
ADAR
RPS3A
NMRAL1
HMOX2
TMEM43
CHCHD4
LYRM4
FARS2
CENPA
SEPSECS
WDR5B
ZNF574
ZNF296
GEMIN7
RFESD
TEX14
RAD51C
FBXW8
RPP25
WDR53
FBXO45
LDHA
SNX8
PGAP2
ZNF33B
PLK1
PPT1
TIMM10
TSNAX
WIPI2
SLC38A5
RPL26
INTS3
PREPL
CAMKMT
MORC2
COMMD1
CCT4
SLC39A8
ACY1
SLC2A4
BSG
SLC38A9
THADA
HNRNPF
SCAPER
MICAL3
ALKBH8
SRFBP1
STK33
PSMB10
CTRL
ZNF718
ZNF595
TTC7A