If a database is inadequate in terms of its description, unclear with respect to the terms of use, or is not downloadable, it may not be fully used, cited or rightly acknowledged by the (research) communities. This is even true for databases with high-quality datasets.
The Life Science Database Archive maintains and stores the datasets generated by life scientists in Japan in a long-term and stable state as national public goods. The Archive makes it easier for many people to search datasets by metadata (description of datasets) in a unified format, and to access and download the datasets with clear terms of use (see here for detailed descriptions).
In addition, the Archive provides datasets in forms friendly to different types of users in public and private institutions, and thereby supports further contribution of each research to life science.
| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |
|---|---|---|---|---|---|---|
| Tokyo Metropolitan Universityopen_in_new | Takeshi Kanegae | cDNA | fern |
The database of Adiantum capillus-veneris EST clones and annotations of them.
|
CC BY-SA Detail |
|
| University of Tsukubaopen_in_new | Hideko Urushihara | cDNA | cellular slime mold |
The database of Dictyostelium discoideum cDNA sequences and annotations (results of blast search, motif search, prediction of product localization, expression profile, alignment to the genome, and so on)
|
CC BY-SA Detail |
|
| The University of Tokyoopen_in_new | Naoki Sato | Protein sequences | 95 species |
The database of protein sequence clusters in 95 species. They are obtained from the comparison of all-against-all blast search results.
|
CC BY-SA Detail |
|
| The University of Tokyoopen_in_new | Takashi Ito | cDNA | budding yeast |
The database of budding yeast 5'cDNA full length clones. |
CC BY-SA Detail |
|
| The University of Tokyoopen_in_new | Takashi Ito | Protein-protein interactions | budding yeast |
The database of budding yeast protein-protein interactions obtained from Y2H. |
CC BY-SA Detail |
|
| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |