If a database is inadequate in terms of its description, unclear with respect to the terms of use, or is not downloadable, it may not be fully used, cited or rightly acknowledged by the (research) communities. This is even true for databases with high-quality datasets.
The Life Science Database Archive maintains and stores the datasets generated by life scientists in Japan in a long-term and stable state as national public goods. The Archive makes it easier for many people to search datasets by metadata (description of datasets) in a unified format, and to access and download the datasets with clear terms of use (see here for detailed descriptions).
In addition, the Archive provides datasets in forms friendly to different types of users in public and private institutions, and thereby supports further contribution of each research to life science.
| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |
|---|---|---|---|---|---|---|
| Symbiotic Evolution and Biological Functions Research Group, Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST) open_in_new | Minoru Moriyama | cDNA | bedbug |
The database of expressed sequence tags (EST) of unique organs and whole bodies of the bedbug, Cimex lectularius.
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CC BY-SA Detail |
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| National Food Research Institute, National Agriculture and Food Research Organization (NARO) open_in_new | Akira Ando | Expression | Yeast |
This database compiles the transcriptomics and phenomics data about the stress tolerance of baker's yeast.
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CC BY-SA Detail |
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| Division of Genome Analysis, Research Center for Genetic Information, Medical Institute of Bioregulation, Kyushu University open_in_new | Kenshi Hayashi | Polymorphism | human |
This database presents true haplotypes and LD structures of Japanese genome, determined using DNA samples obtained from complete hydatidiform moles.
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CC BY-SA Detail |
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| Laboratory for Molecular Developmental Biology Department of Biophysics, Division of Biological Sciences, Graduate School of Science, Kyoto University open_in_new | Kiyokazu Agata | Expression, Localization | planaria |
The database for planarian nervous system analysis, including results of the gene expression profiling of single cells, the gene expression analysis by whole-mount in situ hybridization and the analysis by Immunohistochemical staining.
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CC BY-SA Detail |
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| Kyoto Institute of Technologyopen_in_new | Shigeo Hayashi | Expression | fruit fly |
The database compiles insertion points of Gal4 enhancer trap and patterns of enhancer activity in fruit fly.
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CC BY-SA Detail |
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| Database name⇅ | Maintenance site⇅ | Principal creator⇅ | Database classification⇅ | Organism⇅ | Summary⇅ | License⇅ |