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Life Science Database Archive
Budding yeast cDNA sequencing project

Database Description

General information of database

info Database name Budding yeast cDNA sequencing project
info Alternative name -
info DOI 
info Creator 
Creator Name:
Fumihito Miura
Creator Affiliation:
Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo(when creating)
Creator Name:
Takashi Ito*
Creator Affiliation:
Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo(when creating)
info Contact address 

GSFS - CB-06, Transdisciplinary Sciences, The University of Tokyo
5-1-5 Kashiwanoha, Kashiwa-shi, Chiba-ken
277-8561
Tel: +81-4-7136-3989
FAX: +81-4-7136-3979
E-mail :yeast cDNA

info Database classification Genomics Databases (non-vertebrate) - Fungal genome databases
info Organism 
Taxonomy Name:
Saccharomyces cerevisiae
Taxonomy ID:
info Database description 

5'-end sequences of full-length cDNA clones generated from the budding yeast full-length cDNA library by the vector-capping method and the sequence quality score generated by the Phred software.

info Features and manner of utilization of database 

Since the vector-capping method allows to prepare cDNA possessing a genuine 5'-end, mapping the 5'-end sequence to the genome will lead to accurate identification of the transcription start site.

info License CC BY-SA Detail
info Background and funding 

-
-

info Background and funding 
Name:
KAKENHI (Grant-in-Aid for Scientific Research) on Priority Areas "Systems Genomics" from the Ministry of Education, Culture, Sports, Science and Technology of Japan
Name:
Institute for Bioinformatics Research and Development, Japan Science and Technology Agency
info Reference(s) 
Article title:
A large-scale full-length cDNA analysis to explore the budding yeast transcriptome.
Author name(s):
Miura F, Kawaguchi N, Sese J, Toyoda A, Hattori M, Morishita S, Ito T.
Journal:
Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17846-51.
External Links:
 

Original website information

info Database maintenance site 

info URL of the original website 
info Operation start date 2006/11/14
info Last update date 2006/11/14
info URL of the portal site -
info Whole data download 
info Referenced database 

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info Entry list -
info Query search Not available
info Web services Not available
info URL of Web services -
info Need for user registration -