ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC2 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◣ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
DUX4
HTR5A
MTRNR2L2
MSH3
DHFR
TDRD7
XKR7
GSN
MTRNR2L8
KIF5C
RAB14
NKX1-1
IQSEC3
CAMTA1
SMIM17
LIN28A
INSM2
MTRNR2L1
FAM24A
CPLX2
ZNF555
ZEB1
RIPPLY2
CYB5R4
KCTD18
RAB37
GBA
DLGAP3
FRG2
FRG2C
POLR3H
MAMDC2
NBPF1
KCNH7
RBM48
PEX1
HPCA
RGPD2
RGPD1
ZNF77
CCDC200
TPH2
RTBDN
MAST1
STAT1
CRBN
SNAP25
EPHA10
RNF187
MARCHF4
USP30
BARHL1
ASMTL
SUMF1
KXD1
ZNF581
ZNF580
UTP20
ZNF23
TMEM242
STX16
PDE6D
COPS7B
NUF2
NME1-NME2
NME1
ART1
FANCD2
CADM3
ASF1A
VPS50
HEPACAM2
WASHC2C
ARID3B
SRA1
SLC35A4
APBB3
SLC39A3
CELSR3
SVOP
NAGPA
CEBPE
DNAJC5
CCDC106
LPIN1
CDKN1A
EAPP
TTC26
LOC102724770
DGCR6
SCFD2
NEIL3
TIPARP
POLR2J3
LMLN2
ZNF335
VIM
WASHC2A
SPTAN1
AFAP1
U2AF2
IFT46
ARCN1
ZC3H18
LARP1
EIF2D
RAD23A
CALR
MAPK8IP2
FARSA
TRIP4
PCLAF
SPNS1
TTLL4
HEXA
MTFR2
RRP15
PPP1R35
TMEM101
SPOP
LAT
SSBP1
SCRT1
INTS12
GSTCD
SPATA25
SMG8
IDH3B
GLRA1
ZCWPW1
NUP214
MEPCE
D2HGDH
PRRC2B
DGAT1
UTP25
L1CAM
RTN3
CHGB
ATL3
TAS1R3
VPS33A
HAGH
FAHD1
FAM227B
DTWD1
CA4
TM9SF1
IPO4
EIF1AD
CST6
BANF1
EPN1
AHCY
ZCCHC7
NEURL2
CTSA
CENPP
TMEM262
NEUROD4
WASHC5
NSMCE2
COMMD2
RHEBL1
DHDDS
PTPRN2
PSEN2
RAP1GAP
KIF18B
BUB1B
DHX40
GATB
PRR5L
COMMD9
TXLNA
UBE3B
PRR14
FBRS
TBC1D19
CRNKL1
CFAP61
RBM19
NEK2
PGAM5
RINL
NOL8
CCNA2
GTF3C3
C2orf66
PYY
NAGS
NUP107
KIAA0895
BIRC5
PSMD9
HPD
ITGB3BP
EFCAB7
HMGB1
P4HA1
SUPT7L
SLC4A1AP
SOD2
ESCO2
SFSWAP
FHL3
SEBOX
PEX3
ADAT2
TRMT1
NACC1
ZC3HC1
WDR36
HDAC2
CDK5RAP1
RBBP5
MTRNR2L9
TTC24
IQGAP3
GPR158
C8orf33
WDR74
STX5
EXO1
CFAP54
TSR3
GNPTG
SULT1A4
SULT1A3
ATG14
SPDYE7P
POM121
CCNG2
ENPP3
RFC1
TMEM248
FBXO5
STX18
UBE2O
AANAT
RABGAP1L
CCDC107
ARHGEF39
SLX1B
SLX1A
PKDCC
BOLA2B
BOLA2
SIT1
RBM28
SEPTIN9
OSCAR
NDUFA3
TDRKH
NPPB
CDT1
KDM2A
JUNB
HOOK2
ZSWIM1
TSFM
EIF3F
PAFAH2
KCNB1
QTRT1
METTL15
KIF18A
APRT
UTP11
PAXBP1
PDXK
SF3A3
USP54
UNG
ALKBH2
ERCC1
COX16
UBFD1
EARS2
SMARCD2
MTF2
MED23
PLEKHM3
MIS18A
TOP3B
SGO1
WTAP
KIF20A
BRD8
RPS7
PHRF1
FXN
RRP12
USP35
KCTD21
TACO1
CENPF
DRG2
VTA1
NMBR
NCAPH
ITPRIPL1
PGBD5
SEC24B
TOMM22
CSTF1
AURKA
GET3
HIBADH
SAP30BP
RECQL5
SHC1
CKS1B
NFE2L2
LRRC59
COX6A1
MRPL44
UBC
PBK
GOLGA7
EEF1AKMT3
FLAD1
PWWP2A
GPATCH3
TIMM17A
LMOD1
CBLL1
ZNF830
CCT6B
NDUFS7
RTTN
CHCHD1
CERCAM
MTBP
MRPL13
DDX18
GAS8
BEND3
TICRR
USP2
EBAG9
ZNHIT2
FAU
TMEM199
POLDIP2
METTL1
CYP27B1
TRMO
MYBL2
BOLA2-SMG1P6
KLHL18
KIF9
PFDN4
NXPH3
CKAP2L
THAP9
SEC31A
DNPEP
PDE4C
USPL1
RGL1
ARHGDIA
GPN2
NOTCH2
KDM5B
STAT3
LAMP1
TMCO3
TATDN3
NSL1
DCUN1D2
PHC2
WDR11
SEC13
ANKRD31
NUP54
FANCI
DCLRE1B
AP4B1
RPS19
NDUFS3
KBTBD4
DPF1
ATR
FAM180B
CPPED1
ADAMTS17
SPATA2
NOS3
TRIM24
VPS9D1
IQSEC1
RTN4
PLEC
DYNC2I1
SNX1
PDE1C
CIAO2A
SPRED2
MTDH
GTF3C5
ZKSCAN8
NSUN4
ARPC5
EIF3H
STMN3
RTEL1
KHK
YARS1
S100PBP
ADNP
PPIP5K1
CKMT1B
POLR3F
DZANK1
PRRT3
DBNDD2
RRM2
RAE1
MTRNR2L3
TRAPPC6A
BLOC1S3
TROAP
TJP3
MRM3
GLOD4
EMILIN1
FRMD3
TM7SF2
ANK1
RAB42
CCDC86
PSMC2
DNAJC2
SLC25A51
SLC25A40
DBF4
MRPS35
CYRIB
CDC6
VARS2
GTF2H4
ASIC3
SKA3
MRPL57
YIF1A
TMEM151A
TRIAP1
N6AMT1
CRKL
COMMD4
ANLN
EDC3
ZAR1L
BRCA2
RRS1
ADHFE1
CRYBG1
CORO7-PAM16
CORO7
AURKB
ZCCHC4
RBM47
GPR107
PC
ICMT
HES3
GDAP1
UNC45B
SMIM12
NLE1
CAND1
MTIF2
ELOVL1
CDC20
UBL5
NOTCH2NLA
LTV1
CCDC59
RDH5
ITGA7
BLOC1S1
KMT2D
ANAPC5
C12orf66
XKR9
LACTB2
SPG21
XRCC2
POLR3GL
ANKRD34A
RNF166
CTU2
ATP5F1E
CYP27C1
KLHL20
TEAD1
PPP2R2C
STAG1
DNAJC11
FAM207A
EBNA1BP2
CFAP57
TIGAR
LIX1L
NOP16
HIGD2A
RAD51AP1
C12orf4
SLC12A9
TXNDC9
EIF5B
TTC9B
TRUB2
COQ4
ZFPL1
SYTL3
CDCA5
RAD54L
VPS29
RAD9B
SRRM3
ATP6V0D1
AGRP
CCDC88A
CCDC77
SELENOH
WBP1
PDE4A
INO80B
DNTTIP2
FBXO4
MFSD1
XRN1
SNRPB2
MARCHF8
TMEM41A
DLGAP5
HUS1
BHLHE40
FAM133B
MTRNR2L10
DNAJC25-GNG10
DNAJC25
TEX46
PRKAG2
KDM1A
DCAF10
PPM1B
CCNP
NMNAT1
LZIC
DGKZ
SPAAR
HRCT1
RFX1
CNOT3
SYNJ2
PSMD6
MXI1
ZCCHC14
ARHGAP45
PUS10
PEX13
BCAS3
ANKHD1-EIF4EBP3
ANKHD1
RARA
PIH1D2
NKAPD1
SLC39A7
RXRB
KIAA1586
ANTXR1
TSEN54
SSNA1
ANAPC2
MRPL40
HIRA
OAZ3
MRPL9
UBE2Q1
CHRNB2
TTC27
YTHDF2
MAD2L2
NUDT15
MRPL39
KRR1
MRPS18C
KLHL32
HELQ
POLR2J
NOL6
GSC2
DNAJC6
SYNJ1
LHFPL4
PALM2AKAP2
GTF2H3
EIF2B1
UBE2L3
VPS72
PIP5K1A
TRMT6
MCM8
CEP55
LSG1
ID1
GLI4
AEBP2
OLFML2A
ELMO1
OGDH
TMEM222
PUM3
BOD1
RBM42
KCNJ14
GRWD1
SASS6
VRK1
SUGCT
MPLKIP
CCNB1
TFIP11
CYB5A
INKA2
CLK3
RAB18
ADAMTS14
PARD6B
FAM98B
TEFM
LLGL2
EXOSC5
BCKDHA
TTC31
CHRNA1
CCDC142
NDUFAF5
ESF1
F11R
BNIP1
ICAM2
MOCS3
DPM1
CASKIN2
AAR2
DMAP1
SMIM5
PCNA
NEK6
EMILIN2
BNIP3L
SYT11
GON4L
MACC1
SST
TEKT2
TBC1D30
MOK
IPO11
DIMT1
ADPRS
ANXA5
KAT5
CWC25
NUP42
ERG
FRA10AC1
PSMD3
ENOSF1
CLVS1
NSA2
GFM2
C10orf88
TEDC1
FAM240C
NOP53
KNTC1
CCDC146
ASF1B
C2orf42
WDR4
SLC45A4
NUP35
WDR70
NUP155
DAZAP1
UFD1
CKMT1A
CDC45
C1orf159
TMED9
RAD51
BLCAP
ZHX2
TPCN1
COL23A1
ZSWIM8
VPS37D
NOTCH2NLB
SLC33A1
KCNN4
BAIAP2
PIKFYVE
GPSM1
MRPL27
EME1
SEC22B
NEMP1
NTSR2
MCM10
CDK7
E2F1
SGO2
SOGA1
MICAL3
INTS7
DTL
H6PD
SDAD1
NGDN
AP3S2
DNAH7
ZNF668
ZNF646
KCTD5
LRIG1
C2CD5
ACVR1
CUEDC1
RING1
NDUFAF4
MRPL21
IGHMBP2
HSD17B8
ZBTB45
B4GALT7
NR6A1
CHSY1
ATG9B
TMEM120A
PEDS1-UBE2V1
PEDS1
DPY19L4
ZNF398
DHX37
BRI3BP
NDUFC2-KCTD14
NDUFC2
MRPL10
LRRC46
NET1
MRPS15
CFAP299
RGS14
LMAN2
MRPL3
DUSP1
STEAP2
SLC25A45
KLF1
GCDH
FRMD8
DNASE2
MIS18BP1
KIAA0895L
EXOC3L1
E2F4
ARHGEF12
TMEM181
MRPS23
CACNG3
SH3GLB2
FAM228B
FAM117B
HSD17B1
PSME3
BECN1
RNF181
DBNL
ST6GAL1
SCRT2
MRPL48
SMIM30
SERPINB6
PSMB7
SMN2
SMN1
AEN
ZNF391
DENND2B
TOP3A
SMCR8
WBP1L
PARPBP
NUP37
CENPW
GATAD2A
TBRG4
CRIP1
UBE2H
IBA57
TSEN15
FNBP1
SWSAP1
THAP10
LRRC49
HNRNPF
DZIP3
CIP2A
URM1
H4C15
H4C14
H3C15
H3C14
FAM98A
ZDHHC12
SLC44A1
PPFIA3
C19orf73
PRCP
DDIAS
AGK
RNASEH2C
PPCDC
POLM
ZNF207
C17orf75
ZDHHC24
COASY
ACTN3
SCG3
FAM72C
MCM7
AP4M1
SH2B3
KAT2B
DCAF4
CDC73
PPP1R18
NRM
ARID3A
MMP24
MFSD14A
GTF3C4
DDX31
CLCN3
NFXL1
ALKBH3
GTF2H2C
DIABLO
TCTN3
PSMF1
POLD1
NR1H2
ZGRF1
LARP7
TAF13
PNPT1
PTPRH
ZNF331
CDKN2C
KIF2C
ZNF558
TBC1D16
QKI
U2SURP
SCP2
SLC19A1
CEP128
BBS1
ZSCAN22
SLC25A26
PIEZO1
SYF2
TSN
FBXW8
EIF2B3
RGS3
MITD1
LSM5
AVL9
ADAMTS13
SYNPO
SLC24A1
DIAPH1
MEF2C
CEP135
ALG10
WDR24
UNKL
TAMM41
DDX49
COPE
BLM
AMZ2
ECSIT
DSCC1
NOTCH2NLC
NAGK
TRIP13
TDG
CDK1
C12orf73
BRD9
PFDN6
ZNF546
CCDC92B
RAPGEF6
GNAL
TCAF2
CRYAA2
CRYAA
ARRB1
ABCB8
NNAT
IL1R1
OSBPL7
PPP6R1
ESYT2
PDE11A
TIMM9
SLC4A2
KIAA0586
CDK5
ACBD6
OPA1
FBXO48
APLF
DHRS13
MTR
MPHOSPH10
MCEE
C16orf71
ANKS3
TMEM230
RPAP3
OS9
GTPBP10
OIP5
NUSAP1
CGGBP1
C17orf49
BCL6B
TP53I3
SF3B6
GTF2H2C_2
ALG10B
TFPT
SUPV3L1
PRPF31
ZFYVE26
SLC27A5
RAD51B
CARD8
TBP
PSMB1
LZTFL1
GAMT
RGPD8
RGPD5
PPM1H
KTI12
FZR1
RABL2B
PPWD1
CENPK
MYBL1
EHD1
AGBL3
KIFC1
RGL2
FAF1
SECISBP2
CKS2
CDC25A
SLC7A5
PRPF18
MRPL1
CTCF
VPS11
PHF19
NOL7
THAP7
RUVBL1
HSPA9
FLOT2
WBP2
RPTOR
SLC39A13
RBM45
NDUFB3
NDUFAF1
GPR84
FAM126B
CFAP298-TCP10L