ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

GSK3B
TRPC1
DNAJA1
APTX
H1-2
GLUL
MAMDC2
CLSPN
MCL1
H4C3
H1-6
KANK1
KMT2E
MYLIP
SPTAN1
H4C11
SKP1
COQ10B
FAM53C
CDC25C
C6orf62
SETD5
IFRD1
LRCH4
FBXO24
H4C12
ID4
KLF7
SRSF7
EIF2AK3
HNRNPA2B1
CBX3
SRSF3
PRKRA
PJVK
HNRNPH1
NASP
ZCWPW1
MEPCE
S100A13
CHTOP
JUN
DDX59
ANKRD17
KIF27
SREK1
SLC39A10
ARL15
ARF4
ISCA1
DENND6A
H4C5
KDM4A
FAM168B
MRPL35
IMMT
TTI2
H3C6
HSP90AB1
PFKFB3
IER5L
EEF1A1
SLC9A1
FEM1C
H2AZ1
DNAJB14
H3C15
H3C14
H2AC19
H2AC18
SECISBP2
POLR3D
DDX1
ZFAND5
HSPA1B
H3C12
H2BC17
H2AC17
MTHFD2
ACTB
ZC3H6
H4C14
SARAF
AFF1
ZBTB37
TGOLN2
PRDX1
RPL5
SMIM14
CTNNB1
TRA2B
RPS20
POMZP3
PABPC1
H4C15
TRA2A
NDRG1
NAGK
ACTL6A
MAK16
KPNA1
H2BC8
H2AC8
CENPC
DDAH1
CCN1
SESN2
NFYC
TM2D1
PPIA
CCN2
UBR4
H2BC5
H1-4
UBE2D3
H4C2
H3C2
H2AC4
YWHAQ
NABP1
HSPA5
WDR1
IER5
PTPN14
H2BC11
H2AC11
CAMSAP2
ZNF326
SFPQ
SLC16A1
H2BC12
H2AC12
USP48
HDAC4
DUSP1
S100A1
PPIL3
NIF3L1
CAP1
CCNG1
ZNF644
PPP1R10
MRPS18B
DNAJC25-GNG10
DNAJC25
CNN3
H2BC15
H2AC15
TUFT1
TSC22D2
EIF4A2
UFL1
TAF8
CCND3
RPS12
ZSCAN31
ID2
MAP3K2
RHOB
SLC20A1
VCP
SLIT2
FAM3C
CELSR3
DNAJB5
H2BC21
H2AC21
H2AC20
TMEM18
MAT2A
FER
FSCN1
TMSB10
POR
PITRM1
CYP20A1
BAZ2B
SDCBP
RPS27
RAB13
PDE7A
HNRNPDL
ENOPH1
NREP
TMEM242
RPL12
LRSAM1
FAM200B
UAP1
UBAP2
H3C11
H2AC16
H1-5
GPATCH3
RCC1
MMADHC
DCAF8
ASH2L
USO1
POLR2J3
MATR3
RPS6
CALM2
EPM2A
CLDND1
THUMPD3
STK17A
TUBB4B
GADD45G
AKIRIN2
ATXN7
PLK2
ELMOD2
LBH
STT3B
PLK4
MYNN
ACTRT3
TARDBP
GTPBP8
CACYBP
AMOTL2
RPN1
RNF220
FXR1
TOR1AIP2
TOR1AIP1
RFX3
RABGEF1
ZBTB5
THAP5
NFKBIZ
DNAJB9
SERTAD2
RMI1
HNRNPK
BZW1
HERPUD2
PIK3R3
BCLAF1
H3C4
H2BC7
H2AC7
GORASP2
FN1
MKLN1
AZIN1
TRMO
H4C4
ATG10
SRRM1
PPP2CA
PCBP1
USP40
FILIP1L
TENT5C
OR2T1
UBTD2
ITGAV
H2BC4
H2AC6
LATS1
DUX4
MTRNR2L1
PMEPA1
SKIL
PRKAB2
CHD1L
FRG2C
LAPTM4B
MUC3A
SMAD7
TBC1D1
MTRNR2L2
MSH3
DHFR
SIRT1
BIRC7
COPS8
LURAP1L
WDR74
SERPINE1
MAN1A2
SNX16
RBPJ
TGIF1
FRG2
TUBG1
RETREG3
IL20
KLHL31
MMP20
F2
TEX45
TNIP1
COL7A1
RNF103
DLX3
LIMS1
ERCC1
SULT1C4
MTRNR2L8
PDLIM7
SERPINE2
KDM6B
SLC7A5
SPACA6
TMEM268
VAC14
ID1
PITX2
AGAP3
NODAL
LMNA
ZNF148
DIAPH3
GAD1
TRIM48
GSDMD
FBRS
DISP1
ZNF664-RFLNA
ZNF664
CCDC92
LRRC61
TNFRSF12A
CLDN6
LAMB3
ID3
FSTL3
GAB1
TRIB1
PHLDB2
ANKRD34B
SMYD3
MYO6
TTC39B
OLFM2
THOC6
HCFC1R1
MIS18BP1
CASZ1
NDE1
MARF1
RASGRP3
MTIF2
ARHGAP22
SLC8A1
SMAD3
CMTM6
THEM4
IKZF5
ACADSB
CST6
ME3
PRRG2
NOSIP
CCDC200
ROR2
PPP3R1
HCAR3
CLDN14
PPP1R12B
GIP
ECHDC3
ICAM2
C15orf39
BCL10
FNIP2
TOGARAM1
KLHL28
YPEL5
BRD7
SMG9
LEFTY2
INSYN2A
EPB41L1
OTUD7B
TMEM95
KCTD11
HDGF
PPP1R13L
POLR1G
ABLIM1
AADAT
MTRNR2L9
RICTOR
METTL17
PMF1-BGLAP
PMF1
CCPG1
C15orf65
GPR63
MYADM
PAX6
TYRP1
FAM172A
CDK5RAP2
STAM2
ZNF267
TGM4
NFKBIL1
ATP6V1G2
LIMK1
GID4
ATPAF2
FMN1
SEC31A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LEFTY1
KTN1
BCAT1
DACH1
MCTP1
ALOX5AP
CCDC33
TSKU
TMEM229B
ANK2
SMARCD3
MMP10
CENPA
CTCF
ZNF540
PSMD2
PDGFB
PLCXD3
ALDH1B1
TMEM263
SCD
PEDS1-UBE2V1
PEDS1
PIWIL4
GNB2
DSP
SSBP3
RBM27
PELO
ITGA1
SNX25
FDXACB1
C11orf1
AMPD1
EPB41
B3GNT6
CAV1
TLR1
CSRNP1
PLCXD2
EPS15
PLAGL1
STMN3
KDSR
CHRNA9
NPM3
FGF8
FHL2
KCNN3
ASIC1
SPATS2L
XRN2
ZNF341
EP400
BMPR2
SNX18
FLRT2
KAT5
NEURL1B
MYL10
FGF17
ZNF571
RARA
DHRS3
MS4A10
ITPKC
COQ8B
RILP
TAGLN2
DERL3
MOXD1
PLS1
MRPL2
KLC4
CXCR5
AGO1
UNC45B
ALDH18A1
PLAU
ABCC3
BMF
ANKLE2
CLCF1
MTHFD1L
TNRC6B
STOX2
TECR
DNAJB1
TRIOBP
MACO1
WBP1L
ACOX3
LRRC2
TMTC4
HOPX
RRM1
USP2
CGB5
CGB1
NUP153
VPS28
NPFFR2
CEP55
EPSTI1
E2F3
IVNS1ABP
FDFT1
CLIP3
CGB8
ITGA2
INPP4B
DVL1
TMCO2
ARHGEF18
UPK3BL2
TMPRSS11D
SLC25A25
NAIF1
SLC2A2
BRAP
ACAD10
LTBP1
HOATZ
BTG4
ARSI
PSD3
MYBPH
FST
CABP7
UBR5
NFIC
SERTAD4
PLK3
JMJD1C
CLTB
WDR36
SREBF1
SIAH1
BET1
HAUS7
WARS2
CHST3
LAMC2
KLHL5
BACE1
KLF10
DGAT2
DENND2B
DCAF10
OSGIN2
ELAPOR2
FPR3
PRSS53
ILKAP
C11orf42
SLC35F2
CER1
CCDC88A
ZFR
UTP18
MBTD1
SLC39A13
AHCYL1
SLAIN1
AGFG2
MTNR1A
GATAD1
SRSF10
ZNF592
FAM118A
USP30
TFPI
CPNE2
PSKH1
RFTN1
PLEK2
MBD1
VWA5B2
NSMCE1
ZNRF3
MDN1
DECR1
ZNF609
P3H2
DRAP1
C11orf68
MYOZ2
C1QTNF7
NUMB
ITPRIP
GRSF1
NTMT1
SERPINB8
RHOD
GAS2L1
NOL4L
SLC6A15
LUC7L2
LIMK2
GADD45B
FMC1-LUC7L2
FMC1
MINPP1
LOC389199
KCNJ18
APC
SLC1A1
DNAJB4
LOC100509620
RGPD8
RGPD5
KMT2A
CSF2RB
PANK2
OAZ1
KLRD1
S100A2
MFNG
METTL11B
CDKN1A
SPON2
SERINC2
RUNX1
MACIR
CNOT1
BRIX1
MINDY3
TBXAS1
SP4
CHST11
C1orf100
ASB2
WDR54
POU2F3
C2orf81
RNF223
CDKN2AIP
B4GALT6
NOS1AP
SOWAHC
SHISAL1
SEPTIN10
KAT6A
CPT2
ABTB2
AXL
ANXA8L1
ZNF792
EPG5
LAPTM5
MAP2K3
PHC2
CTPS1
ARHGDIA
POU5F1
PGK1
NPAS4
KIFAP3
PTPRB
PRDM10
PHF19
IL17B
STK10
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
PIK3CD
PLXDC2
UBE2B
FXYD6-FXYD2
FXYD6
CDKL3
PRDM1
CDCA4
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
LENG8
PPP6R1
SMIM35
OSM
TMED8
SIK3
SAMD15
PRMT5
MCM7
AP4M1
ZZZ3
SPTBN1
ZNF575
ETHE1
TRAPPC3L
IFI35
TBC1D7-LOC100130357
TBC1D7
SLC36A2
ASB8
ARHGAP24
GPR183
BHLHE40
WWC2
LOX
AGPS
GOLGA6D
UHRF1
AMPD3
ZBED2
PPP1CB
PIM1
KRT80
FCHSD2
STX1A
KCNK9
VOPP1
SLC46A3
PAQR9
CABLES1
USPL1
TADA1
SPDYE1
HMGB1
FGF1
NOTCH3
CXADR
GLIS3
MARCHF10
FOXJ3
ACSS3
RAB17
JCAD
ZNF460
BLOC1S2
LPCAT3
ZNF655
VDAC2
LRTM1
AMHR2
ZNF720
RRAD
KCNF1
GPR37L1
DYRK2
LEMD3
ETFB
CD8A
NSMCE4A
KRTAP21-3
LRP12
MSX2
PRRT2
PAGR1
MATN2
SLC2A14
COL16A1
LRP6
FAT4
UQCRB
NOCT
KANK4
GTF2B
ETAA1
SFT2D3
BCL11B
FBXL7
UPK3BL1
TSPAN12
IL6
LRRC37A3
BEST3
POU2F2
MAP3K9
CKAP2
PALD1
AQP3
SAT1
KLF4
MRGBP
CALD1
NDEL1
MYOM1
OVCA2
EPB42
SETD6
ROR1
CGB3
TEX46
TENM3
RRNAD1
NUF2
ISG20L2
WNT3
RPRM
CMYA5
TUSC1
MLLT11
MAPK13
CDC42SE1
GJB4
NUP214
IFRD2
UGT1A3
BCL11A
SGK1
MRI1
BAMBI
REV3L
IGF1
PXN
TES
SCG2
UQCRHL
CDHR2
STK40
SCNN1A
LTBR
LOC100287896
LIPT2
INPP5A
KRTAP4-2
KRTAP4-1
BEGAIN
MTFP1
IL34
CHD2
EOMES
PCK2
NRL
CPD
RET
UBA1
PURA
VDAC1
ALDH7A1
HEXB
TTLL2
PLEC
PITPNM3
GCNT1
BCAR1
FOXS1
C2orf74
GOLGA6A
DACT2
KANSL1L
CXCR4
MTMR11
EIF4E
ANK3
POLD4
DST
ATF7-NPFF
ATF7
TCF7
SHKBP1
SLC38A9
CSGALNACT2
CD151
ALK
FAM20C
ZNF296
NDUFS8
MED23
GEMIN7
PLEKHA7
SLAMF1
TOMM20
CTNNA1
KCNK3
TXK
SNX14
IGF1R
SLC25A45
NEDD4L
KCNJ16
FRMD8
EPB41L4A
CEMIP
C5orf63
AGBL2
TTLL8
PRICKLE1
CCNI
PALM2AKAP2
KPNA7
CCT5
ATPSCKMT
COL3A1
SMIM8
DOCK9
UQCRC1
TBC1D5
HRG
COMMD1
SCT
CDHR5
ZFAND2A
NEDD9
FAP
KBTBD2
ITLN2
SLC7A2
ABHD17C
TIPARP
HRH1
FAM178B
PRC1
FLNC
NCAPH
RCAN3
B4GALT7
AGXT2
SH2D7
S100A10
ENOX1
DSTYK
RAB33A
PPP2R2A
MTF2
LTBP3
SLCO5A1
MIXL1
AKAP13
SEC24B
MEF2D
GNL2
BCL9L
TNFAIP3
SUPT6H
SDF2
LRP5
RNF213
MARCHF7
TTC9
PTHLH
PAFAH1B1
B4GALT2
ATP6V0B
LONP2
F13A1
ABCC11
UBE2D2
OR4F3
OR4F29
OR4F16
SLC5A3
SLC44A1
MRPS6
GRIA4
ZNF853
RIMBP3C
RIMBP3B
RAB27A
IGFBP3
C5orf46
CDH15
HS3ST2
DGLUCY
ASCL3
C3orf20
TMEM272
TP53TG5
PIEZO1
ZBTB45
SLC4A8
GSDME
GALNT6
ZSWIM4
PARL
LIMS2
ARHGAP28
SLC51B
ADGRG1
SPOCK3
NPC1
DENR
USP53
RRM2B
P2RY2
NR2C2
ZNF697
RPL23
RHOBTB2
USP17L5
USP17L30
USP17L29