ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957409 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◣ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

DUX4
SKIL
BIRC7
WDR74
FSTL3
SMAD7
MTRNR2L1
MUC3A
COL7A1
ERCC1
PDLIM7
BMF
SPACA6
GIP
PRKAB2
CHD1L
OLFM2
COPS8
KDM6B
SLITRK3
SERPINE1
PPP1R13L
POLR1G
CLDN14
ACOX3
MTIF2
FRG2C
TRIOBP
SMYD3
KAT5
HAUS7
FPR3
FRG2
SNX16
TNFRSF12A
CLDN6
THOC6
HCFC1R1
PURA
SMG9
TMEM184A
SQSTM1
F2
PMEPA1
DNAJB5
PPP6R1
TMEM95
KCTD11
HSPB7
ZNF641
FBRS
KRT80
WBP1L
TCF4
EP400
VDAC2
BMPR2
SVOPL
LEMD3
ZNF460
IL21R
LIMK2
BHLHE40
R3HDML
GPRC5A
TAGLN2
ADGRG1
PAFAH1B1
RCOR3
UAP1
DHRS3
LAPTM4B
TBC1D1
MTRNR2L2
MSH3
DHFR
SIRT1
LURAP1L
MAN1A2
ID2
RBPJ
TGIF1
TUBG1
RETREG3
IL20
KLHL31
MMP20
TEX45
TNIP1
RNF103
DLX3
LIMS1
SULT1C4
MTRNR2L8
SERPINE2
SLC7A5
TMEM268
VAC14
ID1
PITX2
AGAP3
NODAL
LMNA
MAMDC2
ZNF148
DIAPH3
GAD1
TRIM48
GSDMD
DISP1
ZNF664-RFLNA
ZNF664
CCDC92
LRRC61
LAMB3
ID3
GAB1
TRIB1
PHLDB2
ANKRD34B
MYO6
TTC39B
MIS18BP1
CASZ1
NDE1
MARF1
RASGRP3
ARHGAP22
SLC8A1
SMAD3
CMTM6
THEM4
IKZF5
ACADSB
CST6
ME3
PRRG2
NOSIP
CCDC200
ROR2
PPP3R1
HCAR3
PPP1R12B
ECHDC3
ICAM2
C15orf39
BCL10
FNIP2
TOGARAM1
KLHL28
YPEL5
BRD7
LEFTY2
INSYN2A
EPB41L1
OTUD7B
HDGF
ABLIM1
AADAT
MTRNR2L9
RICTOR
METTL17
PMF1-BGLAP
PMF1
CCPG1
C15orf65
GPR63
H4C5
MYADM
PAX6
TYRP1
FAM172A
CDK5RAP2
STAM2
ZNF267
TGM4
NFKBIL1
ATP6V1G2
LIMK1
GID4
ATPAF2
FMN1
SEC31A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LEFTY1
KTN1
BCAT1
DACH1
MCTP1
ALOX5AP
CCDC33
TSKU
TMEM229B
ANK2
SMARCD3
MMP10
CENPA
CTCF
ZNF540
PSMD2
PDGFB
PLCXD3
ALDH1B1
TMEM263
SCD
PEDS1-UBE2V1
PEDS1
PIWIL4
GNB2
DSP
SSBP3
RBM27
PELO
ITGA1
SNX25
FDXACB1
C11orf1
AMPD1
EPB41
B3GNT6
CAV1
TLR1
CSRNP1
PLCXD2
EPS15
PLAGL1
DDAH1
CCN1
STMN3
KDSR
CHRNA9
NPM3
FGF8
FHL2
KCNN3
ASIC1
SPATS2L
XRN2
ZNF341
SNX18
FLRT2
NEURL1B
MYL10
FGF17
ZNF571
RARA
MS4A10
ITPKC
COQ8B
RILP
DERL3
MOXD1
PLS1
MRPL2
KLC4
CXCR5
AGO1
UNC45B
ALDH18A1
PLAU
ABCC3
ANKLE2
CLCF1
MTHFD1L
TNRC6B
STOX2
TECR
DNAJB1
MACO1
LRRC2
TMTC4
HOPX
RRM1
USP2
CGB5
CGB1
NUP153
VPS28
NPFFR2
CEP55
EPSTI1
E2F3
IVNS1ABP
FDFT1
CLIP3
CGB8
ITGA2
INPP4B
SARAF
DVL1
TMCO2
ARHGEF18
UPK3BL2
TMPRSS11D
SLC25A25
NAIF1
SLC2A2
BRAP
ACAD10
LTBP1
HOATZ
BTG4
ARSI
PSD3
MYBPH
KANK1
FST
CABP7
UBR5
NFIC
SERTAD4
PLK3
JMJD1C
CLTB
WDR36
SREBF1
H2BC11
H2AC11
SIAH1
BET1
WARS2
CHST3
LAMC2
KLHL5
BACE1
KLF10
DGAT2
DENND2B
DCAF10
OSGIN2
ELAPOR2
PRSS53
ILKAP
C11orf42
SLC35F2
CER1
CCDC88A
ZFR
UTP18
MBTD1
SLC39A13
AHCYL1
SLAIN1
AGFG2
MTNR1A
GATAD1
SRSF10
ZNF592
FAM118A
CTNNB1
USP30
TFPI
CPNE2
PSKH1
RFTN1
PLEK2
MBD1
H2BC21
H2AC21
H2AC20
VWA5B2
NSMCE1
ZNRF3
MDN1
DECR1
ZNF609
P3H2
DRAP1
C11orf68
MYOZ2
C1QTNF7
NUMB
ITPRIP
GRSF1
NTMT1
SERPINB8
RHOD
GAS2L1
NOL4L
SLC6A15
LUC7L2
GADD45B
FMC1-LUC7L2
FMC1
MINPP1
LOC389199
KCNJ18
APC
SLC1A1
DNAJB4
LOC100509620
RGPD8
RGPD5
KMT2A
CSF2RB
PANK2
OAZ1
KLRD1
S100A2
MFNG
METTL11B
CDKN1A
SPON2
SERINC2
RUNX1
MACIR
CNOT1
BRIX1
MINDY3
TBXAS1
SP4
CHST11
C1orf100
ASB2
WDR54
POU2F3
C2orf81
SLC9A1
RNF223
CDKN2AIP
B4GALT6
NOS1AP
SOWAHC
SHISAL1
SEPTIN10
KAT6A
CPT2
ABTB2
H2AZ1
DNAJB14
AXL
ANXA8L1
ZNF792
EPG5
LAPTM5
MAP2K3
PHC2
CTPS1
ARHGDIA
POU5F1
PGK1
NPAS4
KIFAP3
PTPRB
PRDM10
PHF19
IL17B
STK10
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
PIK3CD
PLXDC2
UBE2B
FXYD6-FXYD2
FXYD6
CDKL3
PRDM1
CDCA4
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
LENG8
SMIM35
OSM
TMED8
SIK3
SAMD15
PRMT5
MCM7
AP4M1
ZZZ3
SPTBN1
ZNF575
ETHE1
TRAPPC3L
IFI35
TBC1D7-LOC100130357
TBC1D7
SLC36A2
ASB8
ARHGAP24
GPR183
WWC2
LOX
GADD45G
AGPS
GOLGA6D
UHRF1
AMPD3
AKIRIN2
ZBED2
PPP1CB
PIM1
FCHSD2
STX1A
KCNK9
VOPP1
SLC46A3
PAQR9
CABLES1
USPL1
TADA1
SPDYE1
HMGB1
FGF1
NOTCH3
CXADR
GLIS3
MARCHF10
MAP3K2
FOXJ3
ACSS3
RAB17
JCAD
BLOC1S2
LPCAT3
ZNF655
LRTM1
AMHR2
ZNF720
RRAD
KCNF1
GPR37L1
DYRK2
ETFB
DUSP1
CD8A
NSMCE4A
KRTAP21-3
HNRNPA2B1
CBX3
LRP12
HSP90AB1
MSX2
PRRT2
PAGR1
MATN2
FSCN1
SLC2A14
COL16A1
LRP6
FAT4
UQCRB
NOCT
KANK4
GTF2B
ETAA1
SFT2D3
BCL11B
FBXL7
UPK3BL1
TSPAN12
IL6
LRRC37A3
BEST3
POU2F2
MAP3K9
CKAP2
PALD1
AQP3
SAT1
KLF4
MRGBP
CALD1
NDEL1
MYOM1
H1-2
OVCA2
EPB42
SETD6
ROR1
CGB3
TEX46
ZC3H6
TENM3
RRNAD1
NUF2
ISG20L2
WNT3
RPRM
LBH
CMYA5
TUSC1
MLLT11
MAPK13
CDC42SE1
GJB4
NUP214
IFRD2
UGT1A3
BCL11A
SGK1
MRI1
BAMBI
REV3L
IGF1
PXN
TES
SCG2
UQCRHL
HERPUD2
H4C12
CDHR2
STK40
SCNN1A
LTBR
LOC100287896
LIPT2
INPP5A
KRTAP4-2
KRTAP4-1
BEGAIN
MTFP1
IL34
CHD2
EOMES
PCK2
NRL
CPD
RET
AFF1
UBA1
VDAC1
ALDH7A1
HEXB
TTLL2
PLEC
PITPNM3
CALM2
GCNT1
FEM1C
BCAR1
FOXS1
C2orf74
GOLGA6A
DACT2
KANSL1L
CXCR4
MTMR11
H4C11
EIF4E
ANK3
POLD4
DST
ATF7-NPFF
ATF7
TCF7
SHKBP1
SLC38A9
CSGALNACT2
CD151
ALK
FAM20C
ZNF296
NDUFS8
MED23
GEMIN7
PLEKHA7
SLAMF1
TOMM20
CTNNA1
SLC20A1
KCNK3
TXK
SNX14
IGF1R
SLC25A45
NEDD4L
KCNJ16
FRMD8
EPB41L4A
CEMIP
C5orf63
AGBL2
TTLL8
PRICKLE1
CCNI
PALM2AKAP2
KPNA7
CCT5
ATPSCKMT
COL3A1
SMIM8
DOCK9
UQCRC1
TBC1D5
HRG
COMMD1
SCT
CDHR5
ZFAND2A
NEDD9
FAP
KBTBD2
ITLN2
SLC7A2
ABHD17C
TIPARP
HRH1
FAM178B
ZBTB5
PRC1
FLNC
NCAPH
RCAN3
B4GALT7
AGXT2
SH2D7
S100A10
ENOX1
DSTYK
RAB33A
PPP2R2A
MTF2
LTBP3
SLCO5A1
MIXL1
AKAP13
SEC24B
MEF2D
GNL2
BCL9L
TNFAIP3
SUPT6H
SDF2
RHOB
LRP5
RNF213
RCC1
MARCHF7
H3C15
H3C14
H2AC19
H2AC18
TTC9
PTHLH
B4GALT2
ATP6V0B
LONP2
F13A1
ABCC11
UBE2D2
OR4F3
OR4F29
OR4F16
SLC5A3
SLC44A1
MRPS6
GRIA4
FAM168B
ZNF853
RIMBP3C
RIMBP3B
RAB27A
IGFBP3
C5orf46
CDH15
HS3ST2
DGLUCY
ASCL3
C3orf20
TMEM272
TP53TG5
PIEZO1
ZBTB45
SLC4A8
GSDME
GALNT6
ZSWIM4
PARL
LIMS2
GSK3B
ARHGAP28
SLC51B
SPOCK3
NPC1
DENR
USP53
UBAP2
RRM2B
PRDX1
P2RY2
NR2C2
CAMSAP2
ZNF697
RPL23
RHOBTB2
KLF7
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
INAVA
NIBAN2
H2AZ2
GLIPR1L1
CAPS2
BAIAP2
ARHGEF4
TEAD4
LARS2
ANKDD1A
TRAM1
TMEM40
GTF3C3
ANAPC11
ALYREF
ABR
TRPC1
SETD1B
PTPRE
LOC100130520
CD300H
ZNF558
NFAT5
SEC62
NTN1
ITGA5
ETS1
ZAP70
GNAL
FAM83A
LAMA5
CCNG1
BUD13
ANXA8
MTHFD2
TMOD1
LMO4
KMT5B
IL17RA
ANGPT2
TRIM55
NOS3
DNAJA1
BPTF
APTX
ITGAE
TTF1
TINAGL1
SAMD14
MAST2
HNRNPD
CFAP77
RND1
MYT1
IVL
ZMIZ1
CRCP
ADGRF2
ADAMTS18
HOXD13
EVX2
SSBP2
RAD54L2
NINJ1
LHX1
ZSWIM7
TTC32
TTC19
PXT1
OR9I1
NAPRT
MROH6
KCTD20
USP22
FZR1
SBF1
GOLGA6B
DDI2
RHOG
RAI1
MARS1
GUCA2A
ARHGAP9
THAP4
STAT5B
IKZF3
CDC37L1
ATAD2
RNF32
NRCAM
GTF2A1
GLUL
VANGL2
DPPA4
TMEM185A
MLXIP
H2AW
USP47
TRABD2A
MECOM
FOXI1
EXT1
TFF1
LOC102724265
ADCY10
XPO1
RHOF
NDST2
LDLRAD4
LBR
CSF1R
IGF2BP1
CDHR3
TMCC2
MARCHF3
MAD2L2
DRAXIN
BMP8B
ADAMTS5
PAWR
TTYH1
TNPO1
SLC35E1
CLSPN
ATP6V1B2
YOD1
ST3GAL2
S100P
QPCT
PFKFB2
GRIK2
ELMO1
CELA3B
CCN2
SPRR1B
ACTBL2
USP42
TAF13
SPDYE14
SPDYE10P
ZNF354A
SHCBP1
SEMA3E
FAM184A
CCL20
CREB5
SYT14
ELN
CHN1
UNKL
OCA2
MIPOL1
AGPAT3
VGLL3
TULP4
TMEM242
OR2T1
GZF1
C1R
C11orf86
APOBEC3A_B
APOBEC3A
MCL1
MAP7
H4C14
GALNT9
CLTC
ZC3H12A
TM2D1
SYNPO
SCOC
RBMS1
MARCHF5
H4C3
H1-6
GRAMD4
CPEB3
PDE4DIP
HOXB13
ECE1
ZBTB38
PAX4
ZSWIM1
SPATA25
PXK
BOK
XAF1
SLC6A1
NLRX1
PDE4C
KMT2E
FOXN4
TMCC1
PIP5K1B
NKX6-3
FXR1
FERMT1