ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064492 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◣ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

ROR2
GID4
ATPAF2
SLC7A5
HDGF
SSBP3
FGF17
SMARCD3
CEP55
TSKU
PMEPA1
PITX2
ELAPOR2
AGFG2
APC
USP2
PLK3
MINDY3
ZNF792
EPG5
FXYD6-FXYD2
FXYD6
ARMC7
CFLAR
LEFTY1
EPSTI1
SLC36A2
GPR183
ACSS3
LRTM1
KCNF1
ETFB
ACOX3
BCL11B
MYOM1
SLC1A1
LEFTY2
UQCRHL
CSRNP1
ID3
WDR54
C2orf81
ZNF664-RFLNA
ZNF664
CCDC92
C2orf74
DACT2
CER1
NODAL
ALOX5AP
TOMM20
IGF1R
ID1
LAPTM4B
NEURL1B
MTRNR2L8
RAB33A
AKAP13
SLC5A3
MRPS6
TMEM272
MTRNR2L2
MSH3
DHFR
TP53TG5
SPOCK3
ARHGEF4
ANKDD1A
NPFFR2
ZNF558
WDR74
NTN1
ZAP70
DGAT2
ANGPT2
TTF1
CFAP77
MYT1
ADGRF2
TTC39B
HOXD13
EVX2
RAB17
CST6
RAI1
MARS1
ARHGAP9
TMEM185A
FOXI1
MTRNR2L1
LBR
CDHR3
COPS8
ATP6V1B2
CELA3B
ZNF296
GEMIN7
SPDYE14
SPDYE10P
SEMA3E
DECR1
GRSF1
AGPAT3
PAX4
SLC6A1
FOXN4
PIP5K1B
ALK
PRR5L
DUSP5
ROR1
MIXL1
TDGF1
NBL1
SACM1L
ARF1
SMAD3
ZNF587B
PLPP4
MRPL22
GEMIN5
UBA1
TCEA2
SOX18
GNA13
RXRG
GPR19
ID2
FLVCR2
DNAJB2
CELA3A
TVP23B
DUS2
DPEP2NB
DDX28
PLAGL1
RNF19A
SLC26A7
ASIC1
APOL3
LPGAT1
TLE2
PKHD1L1
HABP2
PAQR9
TBC1D14
CYTH1
BRD7
CUEDC1
IL17RA
CKM
ARID5B
MDN1
GCNT1
RUNX1T1
CAV1
H2BW2
SUOX
SMAD2
CFAP410
LGR5
SMYD3
IL17RD
DET1
ADPGK
NANP
ACSM4
IFIT3
HOXA2
HNRNPD
ZBTB18
TRIM48
TRMT112
RRBP1
PRND
PRDX5
DDR2
SLC34A2
AASDH
S100A10
CD8A
ADAMTS18
VIPR2
ALG14
DENND2B
FGF5
AKIP1
POU2F3
FGF1
MAMDC2
WDR25
WARS1
UBAP2
MTRNR2L6
MECOM
IRF2BP1
APOBEC3D
SPACA3
PBX2
MSMB
GPSM3
CASTOR2
TEN1
ITGB6
BLOC1S6
ACOX1
PHLDB2
MYCL
CFC1
TRIP10
RBP5
GPR108
CLSTN3
FGFR4
USP53
BDH1
ZNF732
GPT2
HNF4A
APOBEC3F
SLC24A2
CHL1
CCDC60
EPB41L4A
SH3BGR
SALL4
KIT
APOBEC3G
ANKFN1
AIRE
PCK2
NRL
NAA60
PPP1R21
ARHGAP28
SNX18
STK40
NPM3
FGF8
RPRM
UNC50
TBCA
RADIL
IGFBPL1
COA5
AFF3
STK33
SKAP1
ABCB11
MYC
SFXN1
GREM2
FOXO3
TBX3
GPR37
GJB5
STAG1
PIPOX
OCLN
CCDC192
ANKFY1
NUF2
ZIC2
GSTT2B
GSTT2
EHHADH
DDT
BAG3
CCDC200
SBF1
TP53INP1
BOD1L2
DIAPH3
AGPS
ZNF610
CTF1
BCL7C
CCNG1
SFRP1
SERINC3
PTAFR
HRK
ATL2
UACA
LIFR
FBXO34
SMIM8
KRAS
ARHGEF2
ACHE
SOAT1
HACD2
PHC2
SLAMF1
ZBTB25
ZBTB1
SLC37A4
CHD2
PARL
DTNB
CEBPB
GNG10
GAS2L1
SOWAHC
SEPTIN10
TIAM1
LOXL4
IL12B
CELF1
WIPI1
PTGR1
ABLIM1
ZSCAN22
MAGI3
LRIG3
ELMO1
TMEM14B
ADGB
CROCC2
SYNPO2L
CPE
ATF3
VDAC1
TNC
ERGIC1
CRYGB
FGFR2
ADM
MTRNR2L9
ZSWIM3
ACOT8
FDXACB1
C11orf1
TMCC3
MACC1
ZNF540
METTL11B
DST
SCOC
SNTB1
PKP4
CCDC148
ZNF148
ACOXL
TPM1
TVP23C
FBRS
MYO16
CFC1B
CCDC182
TRIM2
RTL10
PLCG2
MYSM1
GNB1L
ADAMTS8
IVNS1ABP
SUCLG1
LOC107986453
PGPEP1
NDUFB7
GSTA1
FZD8
PELI1
GSC
TMEM14A
SPACA6
MSX2
NDST4
HNRNPA2B1
CBX3
MATN3
C5orf63
GUCA2A
UNC80
JAM2
GBP4
ENPEP
DICER1
STAM2
SLC43A3
RNF130
DDX58
SELENOT
FAM83F
CLTA
RAD54L2
EPHB3
TFRC
RNF208
TRIB1
LHX1
SMAP2
ENTPD4
UNC45B
NEDD4L
RDH13
CHIA
ZNF438
PRAG1
TIPARP
SGK3
CDH8
PRDM1
DAAM1
RGS5
SLITRK2
CRTAM
CYP2A6
SETBP1
PLAUR
ZNF76
KLHL4
PTPRD
MYBPH
SLC25A51
GRM3
GLRA3
RASSF10
PKDCC
DUX4
SKIL
PRKAB2
CHD1L
FRG2C
MUC3A
SMAD7
TBC1D1
SIRT1
BIRC7
LURAP1L
SERPINE1
MAN1A2
SNX16
RBPJ
TGIF1
FRG2
TUBG1
RETREG3
IL20
KLHL31
MMP20
F2
TEX45
TNIP1
COL7A1
RNF103
DLX3
LIMS1
ERCC1
SULT1C4
PDLIM7
SERPINE2
KDM6B
TMEM268
VAC14
AGAP3
LMNA
GAD1
GSDMD
DISP1
LRRC61
TNFRSF12A
CLDN6
LAMB3
FSTL3
GAB1
ANKRD34B
MYO6
OLFM2
THOC6
HCFC1R1
MIS18BP1
CASZ1
NDE1
MARF1
RASGRP3
MTIF2
ARHGAP22
SLC8A1
CMTM6
THEM4
IKZF5
ACADSB
ME3
PRRG2
NOSIP
DNAJB5
PPP3R1
HCAR3
CLDN14
PPP1R12B
GIP
ECHDC3
ICAM2
C15orf39
BCL10
FNIP2
TOGARAM1
KLHL28
YPEL5
SMG9
INSYN2A
EPB41L1
OTUD7B
TMEM95
KCTD11
PPP1R13L
POLR1G
AADAT
RICTOR
METTL17
PMF1-BGLAP
PMF1
CCPG1
C15orf65
GPR63
H4C5
MYADM
PAX6
TYRP1
FAM172A
CDK5RAP2
ZNF267
TGM4
NFKBIL1
ATP6V1G2
LIMK1
FMN1
SEC31A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
KTN1
BCAT1
DACH1
MCTP1
CCDC33
TMEM229B
ANK2
MMP10
CENPA
CTCF
PSMD2
PDGFB
PLCXD3
ALDH1B1
UAP1
TMEM263
SCD
PEDS1-UBE2V1
PEDS1
PIWIL4
GNB2
DSP
RBM27
PELO
ITGA1
SNX25
AMPD1
EPB41
B3GNT6
TLR1
PLCXD2
EPS15
DDAH1
CCN1
STMN3
KDSR
CHRNA9
FHL2
KCNN3
SPATS2L
XRN2
ZNF341
EP400
BMPR2
FLRT2
KAT5
MYL10
ZNF571
RARA
DHRS3
MS4A10
ITPKC
COQ8B
RILP
TAGLN2
DERL3
MOXD1
PLS1
MRPL2
KLC4
CXCR5
AGO1
ALDH18A1
PLAU
ABCC3
BMF
ANKLE2
CLCF1
MTHFD1L
TNRC6B
STOX2
TECR
DNAJB1
TRIOBP
MACO1
WBP1L
LRRC2
TMTC4
HOPX
RRM1
CGB5
CGB1
NUP153
VPS28
E2F3
FDFT1
CLIP3
CGB8
ITGA2
INPP4B
SARAF
DVL1
TMCO2
ARHGEF18
UPK3BL2
TMPRSS11D
SLC25A25
NAIF1
SLC2A2
BRAP
ACAD10
LTBP1
HOATZ
BTG4
ARSI
PSD3
KANK1
FST
CABP7
UBR5
NFIC
SERTAD4
JMJD1C
CLTB
WDR36
SREBF1
H2BC11
H2AC11
SIAH1
BET1
HAUS7
WARS2
CHST3
LAMC2
KLHL5
BACE1
KLF10
DCAF10
OSGIN2
FPR3
PRSS53
ILKAP
C11orf42
SLC35F2
CCDC88A
ZFR
UTP18
MBTD1
SLC39A13
AHCYL1
SLAIN1
MTNR1A
GATAD1
SRSF10
ZNF592
FAM118A
CTNNB1
USP30
TFPI
CPNE2
PSKH1
RFTN1
PLEK2
MBD1
H2BC21
H2AC21
H2AC20
VWA5B2
NSMCE1
ZNRF3
ZNF609
P3H2
DRAP1
C11orf68
MYOZ2
C1QTNF7
NUMB
ITPRIP
NTMT1
SERPINB8
RHOD
NOL4L
SLC6A15
LUC7L2
LIMK2
GADD45B
FMC1-LUC7L2
FMC1
MINPP1
LOC389199
KCNJ18
DNAJB4
LOC100509620
RGPD8
RGPD5
KMT2A
CSF2RB
PANK2
OAZ1
KLRD1
S100A2
MFNG
CDKN1A
SPON2
SERINC2
RUNX1
MACIR
CNOT1
BRIX1
TBXAS1
SP4
CHST11
C1orf100
ASB2
SLC9A1
RNF223
CDKN2AIP
B4GALT6
NOS1AP
SHISAL1
KAT6A
CPT2
ABTB2
H2AZ1
DNAJB14
AXL
ANXA8L1
LAPTM5
MAP2K3
CTPS1
ARHGDIA
POU5F1
PGK1
NPAS4
KIFAP3
PTPRB
PRDM10
PHF19
IL17B
STK10
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
PIK3CD
PLXDC2
UBE2B
CDKL3
CDCA4
GOLGA6C
MYOM3
SLC1A4
LENG8
PPP6R1
SMIM35
OSM
TMED8
SIK3
SAMD15
PRMT5
MCM7
AP4M1
ZZZ3
SPTBN1
ZNF575
ETHE1
TRAPPC3L
IFI35
TBC1D7-LOC100130357
TBC1D7
ASB8
ARHGAP24
BHLHE40
WWC2
LOX
GADD45G
GOLGA6D
UHRF1
AMPD3
AKIRIN2
ZBED2
PPP1CB
PIM1
KRT80
FCHSD2
STX1A
KCNK9
VOPP1
SLC46A3
CABLES1
USPL1
TADA1
SPDYE1
HMGB1
NOTCH3
CXADR
GLIS3
MARCHF10
MAP3K2
FOXJ3
JCAD
ZNF460
BLOC1S2
LPCAT3
ZNF655
VDAC2
AMHR2
ZNF720
RRAD
GPR37L1
DYRK2
LEMD3
DUSP1
NSMCE4A
KRTAP21-3
LRP12
HSP90AB1
PRRT2
PAGR1
MATN2
FSCN1
SLC2A14
COL16A1
LRP6
FAT4
UQCRB
NOCT
KANK4
GTF2B
ETAA1
SFT2D3
FBXL7
UPK3BL1
TSPAN12
IL6
LRRC37A3
BEST3
POU2F2
MAP3K9
CKAP2
PALD1
AQP3
SAT1
KLF4
MRGBP
CALD1
NDEL1
H1-2
OVCA2
EPB42
SETD6
CGB3
TEX46
ZC3H6
TENM3
RRNAD1
ISG20L2
WNT3
LBH
CMYA5
TUSC1
MLLT11
MAPK13
CDC42SE1
GJB4
NUP214
IFRD2
UGT1A3
BCL11A
SGK1
MRI1
BAMBI
REV3L
IGF1
PXN
TES
SCG2
HERPUD2
H4C12
CDHR2
SCNN1A
LTBR
LOC100287896
LIPT2
INPP5A
KRTAP4-2
KRTAP4-1
BEGAIN
MTFP1
IL34
EOMES
CPD
RET
AFF1
PURA
ALDH7A1
HEXB
TTLL2
PLEC
PITPNM3
CALM2
FEM1C
BCAR1
FOXS1
GOLGA6A
KANSL1L
CXCR4
MTMR11
H4C11
EIF4E
ANK3
POLD4
ATF7-NPFF
ATF7
TCF7
SHKBP1
SLC38A9
CSGALNACT2
CD151
FAM20C
NDUFS8
MED23
PLEKHA7
CTNNA1
SLC20A1
KCNK3
TXK
SNX14
SLC25A45
KCNJ16
FRMD8
CEMIP
AGBL2
TTLL8
PRICKLE1
CCNI
PALM2AKAP2
KPNA7
CCT5
ATPSCKMT
COL3A1
DOCK9
UQCRC1
TBC1D5
HRG
COMMD1
SCT
CDHR5
ZFAND2A
NEDD9
FAP
KBTBD2
ITLN2
SLC7A2
ABHD17C
HRH1
FAM178B
ZBTB5
PRC1
FLNC
NCAPH
RCAN3
B4GALT7
AGXT2
SH2D7
ENOX1
DSTYK
PPP2R2A
MTF2
LTBP3
SLCO5A1
SEC24B
MEF2D
GNL2
BCL9L
TNFAIP3