ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957405 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◣ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

SIRT1
FRG2C
MUC3A
FRG2
DUX4
TGIF1
SNX16
DLX3
TUBG1
RETREG3
THEM4
KLF4
KDSR
MAN1A2
INSYN2A
RICTOR
SNX25
NFKBIL1
ATP6V1G2
FAM172A
PRRG2
NOSIP
PDGFB
RNF103
LURAP1L
CCPG1
C15orf65
MTRNR2L1
RBPJ
EPB41
OVCA2
KMT5B
PRKAB2
CHD1L
TRIM48
BRAP
ACAD10
CMTM6
MTRNR2L2
MSH3
DHFR
TECR
DNAJB1
PHLDB2
PPP1R12B
IL20
IKZF5
ACADSB
TOGARAM1
KLHL28
OAZ1
SKIL
ICAM2
WDR74
CPT2
ZNF540
ZNF571
CENPA
TMEM263
ID2
FBRS
DERL3
TBC1D7-LOC100130357
TBC1D7
MACIR
PMF1-BGLAP
PMF1
PDLIM7
SARAF
COPS8
UNC45B
UQCRB
SP4
B4GALT7
SIAH1
DNAJB4
LMO4
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
LAPTM4B
LMNA
SLC35E3
TBC1D1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SERP1
EIF2A
DECR1
TEX45
TNFRSF12A
CLDN6
THOC6
HCFC1R1
GNB2
SLC8A1
REV3L
CASZ1
CCDC200
AGAP3
DCAF10
SELENOO
LOC389199
KAT6A
ID3
ARHGDIA
NFIC
BCL10
ZNF592
KMT2A
MFNG
C2CD4C
BET1
SLC38A9
ZBTB45
ZNF341
CNOT1
MMP10
NTMT1
CDKN2AIP
LENG8
SLC25A25
NAIF1
METTL17
TMTC4
CPNE2
CALM1
AXL
GRIA4
PIWIL4
E2F3
ZNF609
FKBP1A
TINAGL1
PDPR
KLHL31
PRRT2
PAGR1
LRP6
SCD
CALM2
CLTC
GTF2B
NEDD9
ID1
ASB8
ZFP37
ANKRD34B
ME3
LHX2
GAB1
SLC39A13
RABEP1
LPCAT3
CCDC88A
STX4
KLF12
ZRSR2
MEIS2
OTUD7B
SLC2A14
TTC30B
PTEN
KLLN
METTL11B
IL6
FLRT2
JMJD1C
NR1H3
ACP2
RNF139
FOXP1
KIAA0232
GSDMD
KCNN3
ZC3H6
PELO
ITGA1
RCOR3
MYLK3
KBTBD2
RRM2B
NFAT5
ZNF217
PPP6R1
MTF2
PDF
SMARCD3
H4C5
FCHSD2
UNKL
RAD23A
TMEM268
CTNNB1
ABCC3
PANK2
FDXACB1
C11orf1
ZNF148
DSTYK
ZNF267
MED23
PXK
UBE2E1
FABP3
FAT4
DCP1A
SIL1
TEX46
KDM1A
KLHL24
VANGL2
WTIP
RAD54L2
PHF3
ZNHIT1
PLOD3
ELF2
TWF1
LAMB3
PMEPA1
SMAD7
BIRC7
SERPINE1
MMP20
F2
TNIP1
COL7A1
LIMS1
ERCC1
SULT1C4
MTRNR2L8
SERPINE2
KDM6B
SLC7A5
SPACA6
VAC14
PITX2
NODAL
MAMDC2
DIAPH3
GAD1
DISP1
ZNF664-RFLNA
ZNF664
CCDC92
LRRC61
FSTL3
TRIB1
SMYD3
MYO6
TTC39B
OLFM2
MIS18BP1
NDE1
MARF1
RASGRP3
MTIF2
ARHGAP22
SMAD3
CST6
DNAJB5
ROR2
PPP3R1
HCAR3
CLDN14
GIP
ECHDC3
C15orf39
FNIP2
YPEL5
BRD7
SMG9
LEFTY2
EPB41L1
TMEM95
KCTD11
HDGF
PPP1R13L
POLR1G
ABLIM1
AADAT
MTRNR2L9
GPR63
MYADM
PAX6
TYRP1
CDK5RAP2
STAM2
TGM4
LIMK1
GID4
ATPAF2
FMN1
SEC31A
LEFTY1
KTN1
BCAT1
DACH1
MCTP1
ALOX5AP
CCDC33
TSKU
TMEM229B
ANK2
CTCF
PSMD2
PLCXD3
ALDH1B1
UAP1
PEDS1-UBE2V1
PEDS1
DSP
SSBP3
RBM27
AMPD1
B3GNT6
CAV1
TLR1
CSRNP1
PLCXD2
EPS15
PLAGL1
DDAH1
CCN1
STMN3
CHRNA9
NPM3
FGF8
FHL2
ASIC1
SPATS2L
XRN2
EP400
BMPR2
SNX18
KAT5
NEURL1B
MYL10
FGF17
RARA
DHRS3
MS4A10
ITPKC
COQ8B
RILP
TAGLN2
MOXD1
PLS1
MRPL2
KLC4
CXCR5
AGO1
ALDH18A1
PLAU
BMF
ANKLE2
CLCF1
MTHFD1L
TNRC6B
STOX2
TRIOBP
MACO1
WBP1L
ACOX3
LRRC2
HOPX
RRM1
USP2
CGB5
CGB1
NUP153
VPS28
NPFFR2
CEP55
EPSTI1
IVNS1ABP
FDFT1
CLIP3
CGB8
ITGA2
INPP4B
DVL1
TMCO2
ARHGEF18
UPK3BL2
TMPRSS11D
SLC2A2
LTBP1
HOATZ
BTG4
ARSI
PSD3
MYBPH
KANK1
FST
CABP7
UBR5
SERTAD4
PLK3
CLTB
WDR36
SREBF1
H2BC11
H2AC11
HAUS7
WARS2
CHST3
LAMC2
KLHL5
BACE1
KLF10
DGAT2
DENND2B
OSGIN2
ELAPOR2
FPR3
PRSS53
ILKAP
C11orf42
SLC35F2
CER1
ZFR
UTP18
MBTD1
AHCYL1
SLAIN1
AGFG2
MTNR1A
GATAD1
SRSF10
FAM118A
USP30
TFPI
PSKH1
RFTN1
PLEK2
MBD1
H2BC21
H2AC21
H2AC20
VWA5B2
NSMCE1
ZNRF3
MDN1
P3H2
DRAP1
C11orf68
MYOZ2
C1QTNF7
NUMB
ITPRIP
GRSF1
SERPINB8
RHOD
GAS2L1
NOL4L
SLC6A15
LUC7L2
LIMK2
GADD45B
FMC1-LUC7L2
FMC1
MINPP1
KCNJ18
APC
SLC1A1
LOC100509620
RGPD8
RGPD5
CSF2RB
KLRD1
S100A2
CDKN1A
SPON2
SERINC2
RUNX1
BRIX1
MINDY3
TBXAS1
CHST11
C1orf100
ASB2
WDR54
POU2F3
C2orf81
SLC9A1
RNF223
B4GALT6
NOS1AP
SOWAHC
SHISAL1
SEPTIN10
ABTB2
H2AZ1
DNAJB14
ANXA8L1
ZNF792
EPG5
LAPTM5
MAP2K3
PHC2
CTPS1
POU5F1
PGK1
NPAS4
KIFAP3
PTPRB
PRDM10
PHF19
IL17B
STK10
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
PIK3CD
PLXDC2
UBE2B
FXYD6-FXYD2
FXYD6
CDKL3
PRDM1
CDCA4
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
SMIM35
OSM
TMED8
SIK3
SAMD15
PRMT5
MCM7
AP4M1
ZZZ3
SPTBN1
ZNF575
ETHE1
TRAPPC3L
IFI35
SLC36A2
ARHGAP24
GPR183
BHLHE40
WWC2
LOX
GADD45G
AGPS
GOLGA6D
UHRF1
AMPD3
AKIRIN2
ZBED2
PPP1CB
PIM1
KRT80
STX1A
KCNK9
VOPP1
SLC46A3
PAQR9
CABLES1
USPL1
TADA1
SPDYE1
HMGB1
FGF1
NOTCH3
CXADR
GLIS3
MARCHF10
MAP3K2
FOXJ3
ACSS3
RAB17
JCAD
ZNF460
BLOC1S2
ZNF655
VDAC2
LRTM1
AMHR2
ZNF720
RRAD
KCNF1
GPR37L1
DYRK2
LEMD3
ETFB
DUSP1
CD8A
NSMCE4A
KRTAP21-3
HNRNPA2B1
CBX3
LRP12
HSP90AB1
MSX2
MATN2
FSCN1
COL16A1
NOCT
KANK4
ETAA1
SFT2D3
BCL11B
FBXL7
UPK3BL1
TSPAN12
LRRC37A3
BEST3
POU2F2
MAP3K9
CKAP2
PALD1
AQP3
SAT1
MRGBP
CALD1
NDEL1
MYOM1
H1-2
EPB42
SETD6
ROR1
CGB3
TENM3
RRNAD1
NUF2
ISG20L2
WNT3
RPRM
LBH
CMYA5
TUSC1
MLLT11
MAPK13
CDC42SE1
GJB4
NUP214
IFRD2
UGT1A3
BCL11A
SGK1
MRI1
BAMBI
IGF1
PXN
TES
SCG2
UQCRHL
HERPUD2
H4C12
CDHR2
STK40
SCNN1A
LTBR
LOC100287896
LIPT2
INPP5A
KRTAP4-2
KRTAP4-1
BEGAIN
MTFP1
IL34
CHD2
EOMES
PCK2
NRL
CPD
RET
AFF1
UBA1
PURA
VDAC1
ALDH7A1
HEXB
TTLL2
PLEC
PITPNM3
GCNT1
FEM1C
BCAR1
FOXS1
C2orf74
GOLGA6A
DACT2
KANSL1L
CXCR4
MTMR11
H4C11
EIF4E
ANK3
POLD4
DST
ATF7-NPFF
ATF7
TCF7
SHKBP1
CSGALNACT2
CD151
ALK
FAM20C
ZNF296
NDUFS8
GEMIN7
PLEKHA7
SLAMF1
TOMM20
CTNNA1
SLC20A1
KCNK3
TXK
SNX14
IGF1R
SLC25A45
NEDD4L
KCNJ16
FRMD8
EPB41L4A
CEMIP
C5orf63
AGBL2
TTLL8
PRICKLE1
CCNI
PALM2AKAP2
KPNA7
CCT5
ATPSCKMT
COL3A1
SMIM8
DOCK9
UQCRC1
TBC1D5
HRG
COMMD1
SCT
CDHR5
ZFAND2A
FAP
ITLN2
SLC7A2
ABHD17C
TIPARP
HRH1
FAM178B
ZBTB5
PRC1
FLNC
NCAPH
RCAN3
AGXT2
SH2D7
S100A10
ENOX1
RAB33A
PPP2R2A
LTBP3
SLCO5A1
MIXL1
AKAP13
SEC24B
MEF2D
GNL2
BCL9L
TNFAIP3
SUPT6H
SDF2
RHOB
LRP5
RNF213
RCC1
MARCHF7
H3C15
H3C14
H2AC19
H2AC18
TTC9
PTHLH
PAFAH1B1
B4GALT2
ATP6V0B
LONP2
F13A1
ABCC11
UBE2D2
OR4F3
OR4F29
OR4F16
SLC5A3
SLC44A1
MRPS6
FAM168B
ZNF853
RIMBP3C
RIMBP3B
RAB27A
IGFBP3
C5orf46
CDH15
HS3ST2
DGLUCY
ASCL3
C3orf20
TMEM272
TP53TG5
PIEZO1
SLC4A8
GSDME
GALNT6
ZSWIM4
PARL
LIMS2
GSK3B
ARHGAP28
SLC51B
ADGRG1
SPOCK3
NPC1
DENR
USP53
UBAP2
PRDX1
P2RY2
NR2C2
CAMSAP2
ZNF697
RPL23
RHOBTB2
KLF7
INAVA
NIBAN2
HSPB7
H2AZ2
GLIPR1L1
CAPS2
BAIAP2
ARHGEF4
TEAD4
LARS2
ANKDD1A
TRAM1
TMEM40
GTF3C3
ANAPC11
ALYREF
ABR
TRPC1
SETD1B
PTPRE
LOC100130520
CD300H
ZNF558
SEC62
NTN1
ITGA5
ETS1
ZAP70
GNAL
FAM83A
LAMA5
CCNG1
BUD13
ANXA8
MTHFD2
TMOD1
IL17RA
ANGPT2
TRIM55
NOS3
DNAJA1
BPTF
APTX
ITGAE
TTF1
SAMD14
MAST2
HNRNPD
CFAP77
RND1
MYT1
IVL
ZMIZ1
CRCP
ADGRF2
ADAMTS18
HOXD13
EVX2
SSBP2
NINJ1
LHX1
ZSWIM7
TTC32
TTC19
PXT1
OR9I1
NAPRT
MROH6
KCTD20
USP22
FZR1
SBF1
GOLGA6B
DDI2
RHOG
RAI1
MARS1
GUCA2A
ARHGAP9
THAP4
STAT5B
IKZF3
CDC37L1
ATAD2
RNF32
NRCAM
GTF2A1
GLUL
R3HDML
IL21R
DPPA4
TMEM185A
MLXIP
H2AW
USP47
TRABD2A
MECOM
FOXI1
EXT1
TFF1
LOC102724265
ADCY10
XPO1
RHOF
NDST2
LDLRAD4
LBR
CSF1R
IGF2BP1
CDHR3
TMCC2
MARCHF3
MAD2L2
DRAXIN
BMP8B
ADAMTS5
PAWR
TTYH1
TNPO1
SLC35E1
CLSPN
ATP6V1B2
YOD1
ST3GAL2
S100P
QPCT
PFKFB2
GRIK2
ELMO1
CELA3B
CCN2
SPRR1B
ACTBL2
USP42
TAF13
SPDYE14
SPDYE10P
ZNF354A
SHCBP1
SEMA3E
FAM184A
CCL20
CREB5
SYT14
ELN
CHN1
OCA2
MIPOL1
AGPAT3
VGLL3
TULP4
TMEM242
OR2T1
GZF1
C1R
C11orf86
APOBEC3A_B
APOBEC3A
MCL1